RNA–Protein interactions for RNA: ENST00000389005.5

NCBP3-201, Transcript of nuclear cap binding subunit 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NCBP3, Length 12,770 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-201ENST00000389005 CXorf56Q9H5V9 222 aa8.55□□□□□ -1.04
NCBP3-201ENST00000389005 L1RE1Q9UN81 338 aa8.55□□□□□ -1.04
NCBP3-201ENST00000389005 COPEO14579 308 aa8.55□□□□□ -1.04
NCBP3-201ENST00000389005 GGPS1O95749 300 aa8.55□□□□□ -1.04
NCBP3-201ENST00000389005 PSMA2P25787 234 aa8.55□□□□□ -1.04
NCBP3-201ENST00000389005 FAM20AQ96MK3 541 aa8.55□□□□□ -1.04
NCBP3-201ENST00000389005 TRIM51Q9BSJ1 452 aa8.55□□□□□ -1.04
NCBP3-201ENST00000389005 SYNJ2BP-COX16A0A087WUM0 186 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 H3BQF6 201 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 ABCD1P33897 745 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 GRAPQ13588 217 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 GRAPLQ8TC17 118 aaPredicted RBP8.54□□□□□ -1.04
NCBP3-201ENST00000389005 SPDL1Q96EA4 605 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 XPO6Q96QU8 1125 aaKnown RBP8.54□□□□□ -1.04
NCBP3-201ENST00000389005 COX16Q9P0S2 106 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 SEC24CP53992 1094 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 FAM160B1Q5W0V3 765 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 GPR101Q96P66 508 aaPredicted RBP8.54□□□□□ -1.04
NCBP3-201ENST00000389005 TTC7AQ9ULT0 858 aaPredicted RBP8.54□□□□□ -1.04
NCBP3-201ENST00000389005 GOLGA4Q13439 2230 aaKnown RBP8.54□□□□□ -1.04
NCBP3-201ENST00000389005 MED7O43513 233 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 NCAPHQ15003 741 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 ANKRD36BP1Q96IX9 119 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 NXF1Q9UBU9 619 aaKnown RBP8.54□□□□□ -1.04
NCBP3-201ENST00000389005 PTGISQ16647 500 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 KLHL38Q2WGJ6 581 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.54□□□□□ -1.04
NCBP3-201ENST00000389005 MED10Q9BTT4 135 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 RAD51CO43502 376 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 TTC4O95801 387 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 ART3Q13508 389 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 KRT80Q6KB66 452 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 HPSEQ9Y251 543 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 PTPRUQ92729 1446 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 SPECC1L-ADORA2AF8WAN1 911 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 KCNQ4P56696 695 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 SNAP25P60880 206 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 TFDP1Q14186 410 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 HIPK4Q8NE63 616 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 NEDD1Q8NHV4 660 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 ABTB1Q969K4 478 aaPredicted RBP8.54□□□□□ -1.04
NCBP3-201ENST00000389005 TFR2Q9UP52 801 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 ELF1P32519 619 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 STAT3P40763 770 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 AGBL2Q5U5Z8 902 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 ZNF512BQ96KM6 892 aaPredicted RBP8.54□□□□□ -1.04
NCBP3-201ENST00000389005 DRC3Q9H069 523 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 SEL1LQ9UBV2 794 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 OVOS2A0A0J9YW53 1432 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 OVOS2Q6IE36 1432 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 INO80B-WBP1J3KQ70 363 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 HNRNPH1P31943 449 aaKnown RBP8.54□□□□□ -1.04
NCBP3-201ENST00000389005 HDAC11Q96DB2 347 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 SEC16BQ96JE7 1060 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 C11orf70Q9BRQ4 267 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 INO80BQ9C086 356 aaPredicted RBP8.54□□□□□ -1.04
NCBP3-201ENST00000389005 SDCCAG3Q96C92 435 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 DYDC2Q96IM9 177 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 ZWILCHQ9H900 591 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 CPS1P31327 1500 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 STX1BP61266 288 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 RSRC2Q7L4I2 434 aaKnown RBP8.54□□□□□ -1.04
NCBP3-201ENST00000389005 ERGIC2Q96RQ1 377 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 MSTO1Q9BUK6 570 aa8.54□□□□□ -1.04
NCBP3-201ENST00000389005 EPB41L4AQ9HCS5 686 aaPredicted RBP8.54□□□□□ -1.04
NCBP3-201ENST00000389005 KRT38O76015 456 aa8.53□□□□□ -1.04
NCBP3-201ENST00000389005 ECM2O94769 699 aaPredicted RBP8.53□□□□□ -1.04
NCBP3-201ENST00000389005 VAMP7P51809 220 aa8.53□□□□□ -1.04
NCBP3-201ENST00000389005 A0A1W2PQJ5 194 aa8.53□□□□□ -1.04
NCBP3-201ENST00000389005 CFLARO15519 480 aa8.53□□□□□ -1.04
NCBP3-201ENST00000389005 NCF2P19878 526 aaPredicted RBP8.53□□□□□ -1.04
NCBP3-201ENST00000389005 PEX3P56589 373 aa8.53□□□□□ -1.04
NCBP3-201ENST00000389005 TMEM179Q6ZVK1 233 aa8.53□□□□□ -1.04
NCBP3-201ENST00000389005 G3BP2Q9UN86 482 aaKnown RBP8.53□□□□□ -1.04
NCBP3-201ENST00000389005 HSPA9P38646 679 aaKnown RBP8.53□□□□□ -1.04
NCBP3-201ENST00000389005 NAB2Q15742 525 aa8.53□□□□□ -1.04
NCBP3-201ENST00000389005 SPATA21Q7Z572 469 aa8.53□□□□□ -1.04
NCBP3-201ENST00000389005 GOLGA8MH3BSY2 632 aa8.53□□□□□ -1.04
NCBP3-201ENST00000389005 DIAPH2O60879 1101 aa8.53□□□□□ -1.04
NCBP3-201ENST00000389005 KLK7P49862 253 aa8.53□□□□□ -1.04
NCBP3-201ENST00000389005 ERICH1Q86X53 443 aa8.53□□□□□ -1.04
NCBP3-201ENST00000389005 DNAAF3Q8N9W5 541 aa8.53□□□□□ -1.04
NCBP3-201ENST00000389005 GRAMD1AQ96CP6 724 aa8.53□□□□□ -1.04
NCBP3-201ENST00000389005 CDHR1Q96JP9 859 aa8.53□□□□□ -1.04
NCBP3-201ENST00000389005 SRP68Q9UHB9 627 aaKnown RBP8.53□□□□□ -1.04
NCBP3-201ENST00000389005 PDXKO00764 312 aa8.53□□□□□ -1.04
NCBP3-201ENST00000389005 SCARA5Q6ZMJ2 495 aa8.53□□□□□ -1.04
NCBP3-201ENST00000389005 RAPH1Q70E73 1250 aa8.53□□□□□ -1.04
NCBP3-201ENST00000389005 LRRN4CLQ8ND94 238 aa8.53□□□□□ -1.04
NCBP3-201ENST00000389005 OR2W6PQ8NHA6 318 aa8.53□□□□□ -1.04
NCBP3-201ENST00000389005 RNF25Q96BH1 459 aaPredicted RBP8.53□□□□□ -1.04
NCBP3-201ENST00000389005 MID2Q9UJV3 735 aa8.53□□□□□ -1.04
NCBP3-201ENST00000389005 MYMKA6NI61 221 aa8.53□□□□□ -1.04
NCBP3-201ENST00000389005 SLC16A3O15427 465 aaKnown RBP8.53□□□□□ -1.04
NCBP3-201ENST00000389005 PLEKP08567 350 aaPredicted RBP8.53□□□□□ -1.04
NCBP3-201ENST00000389005 GPS1Q13098 491 aa8.53□□□□□ -1.04
NCBP3-201ENST00000389005 TRIM65Q6PJ69 517 aa8.53□□□□□ -1.04
NCBP3-201ENST00000389005 WDR75Q8IWA0 830 aaKnown RBP8.53□□□□□ -1.04
NCBP3-201ENST00000389005 PDZD8Q8NEN9 1154 aa8.53□□□□□ -1.04
NCBP3-201ENST00000389005 C1orf54Q8WWF1 131 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms