RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 SHC4Q6S5L8 630 aa17.96■□□□□ 0.47
SNRPB-201ENST00000381342 TSHZ1Q6ZSZ6 1077 aa17.96■□□□□ 0.47
SNRPB-201ENST00000381342 TCP11Q8WWU5 503 aa17.96■□□□□ 0.47
SNRPB-201ENST00000381342 NLRP7Q8WX94 980 aa17.96■□□□□ 0.47
SNRPB-201ENST00000381342 NLRP4Q96MN2 994 aa17.96■□□□□ 0.47
SNRPB-201ENST00000381342 RUSC1Q9BVN2 902 aa17.96■□□□□ 0.47
SNRPB-201ENST00000381342 POLR3FQ9H1D9 316 aaPredicted RBP17.96■□□□□ 0.47
SNRPB-201ENST00000381342 ADAMTS10Q9H324 1103 aa17.96■□□□□ 0.47
SNRPB-201ENST00000381342 GDPD2Q9HCC8 539 aa17.96■□□□□ 0.47
SNRPB-201ENST00000381342 COL4A3BPQ9Y5P4 624 aa17.96■□□□□ 0.47
SNRPB-201ENST00000381342 CA3P07451 260 aa17.95■□□□□ 0.46
SNRPB-201ENST00000381342 CD52P31358 61 aa17.95■□□□□ 0.46
SNRPB-201ENST00000381342 CRYBB1P53674 252 aaPredicted RBP17.95■□□□□ 0.46
SNRPB-201ENST00000381342 PLEKHG4Q58EX7 1191 aa17.95■□□□□ 0.46
SNRPB-201ENST00000381342 MCPH1Q8NEM0 835 aa17.95■□□□□ 0.46
SNRPB-201ENST00000381342 ASAP3Q8TDY4 903 aa17.95■□□□□ 0.46
SNRPB-201ENST00000381342 PRPF31Q8WWY3 499 aaKnown RBP17.95■□□□□ 0.46
SNRPB-201ENST00000381342 IPO9Q96P70 1041 aaKnown RBP17.95■□□□□ 0.46
SNRPB-201ENST00000381342 IFIH1Q9BYX4 1025 aaKnown RBP17.95■□□□□ 0.46
SNRPB-201ENST00000381342 AGO3Q9H9G7 860 aaKnown RBP17.95■□□□□ 0.46
SNRPB-201ENST00000381342 BLOC1S4Q9NUP1 217 aa17.95■□□□□ 0.46
SNRPB-201ENST00000381342 CHMP5Q9NZZ3 219 aa17.95■□□□□ 0.46
SNRPB-201ENST00000381342 A0A087WZ62 844 aa17.94■□□□□ 0.46
SNRPB-201ENST00000381342 PLA2G4BP0C869 781 aa17.94■□□□□ 0.46
SNRPB-201ENST00000381342 CYP11B2P19099 503 aa17.94■□□□□ 0.46
SNRPB-201ENST00000381342 SLC12A3P55017 1021 aa17.94■□□□□ 0.46
SNRPB-201ENST00000381342 LAMTOR4Q0VGL1 99 aa17.94■□□□□ 0.46
SNRPB-201ENST00000381342 MCM6Q14566 821 aa17.94■□□□□ 0.46
SNRPB-201ENST00000381342 FAM102BQ5T8I3 360 aa17.94■□□□□ 0.46
SNRPB-201ENST00000381342 FAM117BQ6P1L5 589 aa17.94■□□□□ 0.46
SNRPB-201ENST00000381342 MYOCDQ8IZQ8 938 aa17.94■□□□□ 0.46
SNRPB-201ENST00000381342 PDILTQ8N807 584 aa17.94■□□□□ 0.46
SNRPB-201ENST00000381342 RAD54LQ92698 747 aa17.94■□□□□ 0.46
SNRPB-201ENST00000381342 RAD9AQ99638 391 aa17.94■□□□□ 0.46
SNRPB-201ENST00000381342 FDXACB1Q9BRP7 624 aaPredicted RBP17.94■□□□□ 0.46
SNRPB-201ENST00000381342 SCAND2PQ9GZW5 306 aaPredicted RBP17.94■□□□□ 0.46
SNRPB-201ENST00000381342 CCDC39Q9UFE4 941 aa17.94■□□□□ 0.46
SNRPB-201ENST00000381342 NOC2LQ9Y3T9 749 aaKnown RBP17.94■□□□□ 0.46
SNRPB-201ENST00000381342 GTPBP6O43824 516 aaPredicted RBP17.93■□□□□ 0.46
SNRPB-201ENST00000381342 ARL2P36404 184 aa17.93■□□□□ 0.46
SNRPB-201ENST00000381342 DEFB103AP81534 67 aa17.93■□□□□ 0.46
SNRPB-201ENST00000381342 PAK2Q13177 524 aa17.93■□□□□ 0.46
SNRPB-201ENST00000381342 CAPSQ13938 189 aa17.93■□□□□ 0.46
SNRPB-201ENST00000381342 DHX8Q14562 1220 aaKnown RBP17.93■□□□□ 0.46
SNRPB-201ENST00000381342 RINT1Q6NUQ1 792 aa17.93■□□□□ 0.46
SNRPB-201ENST00000381342 FAM228AQ86W67 206 aa17.93■□□□□ 0.46
SNRPB-201ENST00000381342 KCTD17Q8N5Z5 321 aa17.93■□□□□ 0.46
SNRPB-201ENST00000381342 SYT2Q8N9I0 419 aaPredicted RBP17.93■□□□□ 0.46
SNRPB-201ENST00000381342 PANK2Q9BZ23 570 aa17.93■□□□□ 0.46
SNRPB-201ENST00000381342 POLD4Q9HCU8 107 aa17.93■□□□□ 0.46
SNRPB-201ENST00000381342 LAMA2P24043 3122 aaKnown RBP17.93■□□□□ 0.46
SNRPB-201ENST00000381342 CSDE1O75534 798 aaKnown RBP17.92■□□□□ 0.46
SNRPB-201ENST00000381342 RPS6KA5O75582 802 aa17.92■□□□□ 0.46
SNRPB-201ENST00000381342 GJB5O95377 273 aa17.92■□□□□ 0.46
SNRPB-201ENST00000381342 SRGAP2CP0DJJ0 459 aa17.92■□□□□ 0.46
SNRPB-201ENST00000381342 DARSP14868 501 aaKnown RBP17.92■□□□□ 0.46
SNRPB-201ENST00000381342 FGFR4P22455 802 aa17.92■□□□□ 0.46
SNRPB-201ENST00000381342 GLRA2P23416 452 aa17.92■□□□□ 0.46
SNRPB-201ENST00000381342 STAT6P42226 847 aa17.92■□□□□ 0.46
SNRPB-201ENST00000381342 RAD51AP2Q09MP3 1159 aa17.92■□□□□ 0.46
SNRPB-201ENST00000381342 TPRNQ4KMQ1 711 aa17.92■□□□□ 0.46
SNRPB-201ENST00000381342 NAALADL2Q58DX5 795 aa17.92■□□□□ 0.46
SNRPB-201ENST00000381342 RRAGBQ5VZM2 374 aa17.92■□□□□ 0.46
SNRPB-201ENST00000381342 RESP18Q5W5W9 173 aa17.92■□□□□ 0.46
SNRPB-201ENST00000381342 C1orf186Q6ZWK4 172 aa17.92■□□□□ 0.46
SNRPB-201ENST00000381342 ZNF410Q86VK4 478 aa17.92■□□□□ 0.46
SNRPB-201ENST00000381342 GPBP1Q86WP2 473 aa17.92■□□□□ 0.46
SNRPB-201ENST00000381342 USP38Q8NB14 1042 aa17.92■□□□□ 0.46
SNRPB-201ENST00000381342 RNF149Q8NC42 400 aa17.92■□□□□ 0.46
SNRPB-201ENST00000381342 PPM1EQ8WY54 764 aa17.92■□□□□ 0.46
SNRPB-201ENST00000381342 BSNDQ8WZ55 320 aa17.92■□□□□ 0.46
SNRPB-201ENST00000381342 LARP4BQ92615 738 aaKnown RBP17.92■□□□□ 0.46
SNRPB-201ENST00000381342 CERS4Q9HA82 394 aa17.92■□□□□ 0.46
SNRPB-201ENST00000381342 ERVK-5Q9HDB9 667 aa17.92■□□□□ 0.46
SNRPB-201ENST00000381342 STK17AQ9UEE5 414 aa17.92■□□□□ 0.46
SNRPB-201ENST00000381342 PADI3Q9ULW8 664 aa17.92■□□□□ 0.46
SNRPB-201ENST00000381342 INSL6Q9Y581 213 aa17.92■□□□□ 0.46
SNRPB-201ENST00000381342 SQORQ9Y6N5 450 aa17.92■□□□□ 0.46
SNRPB-201ENST00000381342 NPHP3-ACAD11A0A0J9YXS1 232 aa17.91■□□□□ 0.46
SNRPB-201ENST00000381342 HIP1RO75146 1068 aa17.91■□□□□ 0.46
SNRPB-201ENST00000381342 EIF4BP23588 611 aaKnown RBP17.91■□□□□ 0.46
SNRPB-201ENST00000381342 MXD4Q14582 209 aaPredicted RBP17.91■□□□□ 0.46
SNRPB-201ENST00000381342 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.91■□□□□ 0.461e-9■■■■■ 78.4
SNRPB-201ENST00000381342 CCDC73Q6ZRK6 1079 aa17.91■□□□□ 0.46
SNRPB-201ENST00000381342 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.91■□□□□ 0.469e-7■□□□□ 8.9
SNRPB-201ENST00000381342 DAW1Q8N136 415 aa17.91■□□□□ 0.46
SNRPB-201ENST00000381342 ZNF710Q8N1W2 664 aa17.91■□□□□ 0.46
SNRPB-201ENST00000381342 ARNTL2Q8WYA1 636 aa17.91■□□□□ 0.46
SNRPB-201ENST00000381342 GCOM2Q9BZD3 368 aaPredicted RBP17.91■□□□□ 0.46
SNRPB-201ENST00000381342 TSPYL2Q9H2G4 693 aaPredicted RBP17.91■□□□□ 0.46
SNRPB-201ENST00000381342 IFT122Q9HBG6 1241 aa17.91■□□□□ 0.46
SNRPB-201ENST00000381342 LRRIQ4A6NIV6 560 aa17.9■□□□□ 0.46
SNRPB-201ENST00000381342 ASAP2O43150 1006 aa17.9■□□□□ 0.46
SNRPB-201ENST00000381342 GUCY2CP25092 1073 aa17.9■□□□□ 0.46
SNRPB-201ENST00000381342 PHKA2P46019 1235 aa17.9■□□□□ 0.46
SNRPB-201ENST00000381342 CDC42EP1Q00587 391 aa17.9■□□□□ 0.46
SNRPB-201ENST00000381342 CACNB1Q02641 598 aaPredicted RBP17.9■□□□□ 0.46
SNRPB-201ENST00000381342 TAP1Q03518 808 aa17.9■□□□□ 0.46
SNRPB-201ENST00000381342 NFX1Q12986 1120 aaKnown RBP17.9■□□□□ 0.46
SNRPB-201ENST00000381342 MAPK7Q13164 816 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms