RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 Q6ZUG5 572 aa18.02■□□□□ 0.48
VCX3A-201ENST00000381089 RDM1Q8NG50 284 aa18.02■□□□□ 0.48
VCX3A-201ENST00000381089 ZNF668Q96K58 619 aaPredicted RBP18.02■□□□□ 0.48
VCX3A-201ENST00000381089 INO80BQ9C086 356 aaPredicted RBP18.02■□□□□ 0.48
VCX3A-201ENST00000381089 POMKQ9H5K3 350 aa18.02■□□□□ 0.48
VCX3A-201ENST00000381089 CACNA1HO95180 2353 aa18.01■□□□□ 0.47
VCX3A-201ENST00000381089 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.01■□□□□ 0.47
VCX3A-201ENST00000381089 MSH4O15457 936 aa18.01■□□□□ 0.47
VCX3A-201ENST00000381089 ZNF862O60290 1169 aa18.01■□□□□ 0.47
VCX3A-201ENST00000381089 CLASP2O75122 1294 aaKnown RBP18.01■□□□□ 0.47
VCX3A-201ENST00000381089 ATAT1Q5SQI0 421 aa18.01■□□□□ 0.47
VCX3A-201ENST00000381089 ZNF598Q86UK7 904 aaKnown RBP18.01■□□□□ 0.47
VCX3A-201ENST00000381089 VPS52Q8N1B4 723 aa18.01■□□□□ 0.47
VCX3A-201ENST00000381089 PLCD3Q8N3E9 789 aa18.01■□□□□ 0.47
VCX3A-201ENST00000381089 TDRD5Q8NAT2 981 aaKnown RBP18.01■□□□□ 0.47
VCX3A-201ENST00000381089 BRF1Q92994 677 aa18.01■□□□□ 0.47
VCX3A-201ENST00000381089 LENG9Q96B70 501 aa18.01■□□□□ 0.47
VCX3A-201ENST00000381089 C22orf23Q9BZE7 217 aa18.01■□□□□ 0.47
VCX3A-201ENST00000381089 FAM86C1Q9NVL1 165 aa18.01■□□□□ 0.47
VCX3A-201ENST00000381089 SEPT9Q9UHD8 586 aaPredicted RBP18.01■□□□□ 0.47
VCX3A-201ENST00000381089 USP34Q70CQ2 3546 aa18.01■□□□□ 0.47
VCX3A-201ENST00000381089 WDR81Q562E7 1941 aa18■□□□□ 0.47
VCX3A-201ENST00000381089 C2CD4DB7Z1M9 353 aa18■□□□□ 0.47
VCX3A-201ENST00000381089 ZC3H11AO75152 810 aaKnown RBP eCLIP18■□□□□ 0.47
VCX3A-201ENST00000381089 CDC45O75419 566 aa18■□□□□ 0.47
VCX3A-201ENST00000381089 FGFR4P22455 802 aa18■□□□□ 0.47
VCX3A-201ENST00000381089 POLGP54098 1239 aaPredicted RBP18■□□□□ 0.47
VCX3A-201ENST00000381089 RARS2Q5T160 578 aaKnown RBP18■□□□□ 0.47
VCX3A-201ENST00000381089 TWF2Q6IBS0 349 aaKnown RBP18■□□□□ 0.47
VCX3A-201ENST00000381089 BLOC1S2Q6QNY1 142 aa18■□□□□ 0.47
VCX3A-201ENST00000381089 GLB1LQ6UWU2 654 aa18■□□□□ 0.47
VCX3A-201ENST00000381089 MIER3Q7Z3K6 550 aa18■□□□□ 0.47
VCX3A-201ENST00000381089 PHKBQ93100 1093 aa18■□□□□ 0.47
VCX3A-201ENST00000381089 RNF26Q9BY78 433 aaPredicted RBP18■□□□□ 0.47
VCX3A-201ENST00000381089 STK39Q9UEW8 545 aa18■□□□□ 0.47
VCX3A-201ENST00000381089 DBR1Q9UK59 544 aaKnown RBP18■□□□□ 0.47
VCX3A-201ENST00000381089 NID2Q14112 1375 aa18■□□□□ 0.47
VCX3A-201ENST00000381089 SPDYE4A6NLX3 237 aa17.99■□□□□ 0.47
VCX3A-201ENST00000381089 NT5C1B-RDH14C9J2C7 533 aa17.99■□□□□ 0.47
VCX3A-201ENST00000381089 GALR2O43603 387 aaPredicted RBP17.99■□□□□ 0.47
VCX3A-201ENST00000381089 PHKA2P46019 1235 aa17.99■□□□□ 0.47
VCX3A-201ENST00000381089 RAB27AP51159 221 aa17.99■□□□□ 0.47
VCX3A-201ENST00000381089 RNASELQ05823 741 aaKnown RBP17.99■□□□□ 0.47
VCX3A-201ENST00000381089 MTERF2Q49AM1 385 aa17.99■□□□□ 0.47
VCX3A-201ENST00000381089 XKR3Q5GH77 459 aa17.99■□□□□ 0.47
VCX3A-201ENST00000381089 KIAA1841Q6NSI8 718 aa17.99■□□□□ 0.47
VCX3A-201ENST00000381089 ZNF410Q86VK4 478 aa17.99■□□□□ 0.47
VCX3A-201ENST00000381089 PPFIBP1Q86W92 1011 aa17.99■□□□□ 0.47
VCX3A-201ENST00000381089 SLC5A5Q92911 643 aa17.99■□□□□ 0.47
VCX3A-201ENST00000381089 JAKMIP1Q96N16 626 aaKnown RBP17.99■□□□□ 0.47
VCX3A-201ENST00000381089 JPH2Q9BR39 696 aaPredicted RBP17.99■□□□□ 0.47
VCX3A-201ENST00000381089 TRAIPQ9BWF2 469 aa17.99■□□□□ 0.47
VCX3A-201ENST00000381089 SLC26A6Q9BXS9 759 aa17.99■□□□□ 0.47
VCX3A-201ENST00000381089 ZBP1Q9H171 429 aa17.99■□□□□ 0.47
VCX3A-201ENST00000381089 UNC45AQ9H3U1 944 aa17.99■□□□□ 0.47
VCX3A-201ENST00000381089 MFSD1Q9H3U5 465 aa17.99■□□□□ 0.47
VCX3A-201ENST00000381089 USTQ9Y2C2 406 aa17.99■□□□□ 0.47
VCX3A-201ENST00000381089 H0Y858 1186 aa17.98■□□□□ 0.47
VCX3A-201ENST00000381089 ADAMTS3O15072 1205 aa17.98■□□□□ 0.47
VCX3A-201ENST00000381089 PDGFBP01127 241 aaPredicted RBP17.98■□□□□ 0.47
VCX3A-201ENST00000381089 CTSAP10619 480 aa17.98■□□□□ 0.47
VCX3A-201ENST00000381089 NLRP5P59047 1200 aa17.98■□□□□ 0.47
VCX3A-201ENST00000381089 TARBP2Q15633 366 aaKnown RBP17.98■□□□□ 0.47
VCX3A-201ENST00000381089 UGCGQ16739 394 aa17.98■□□□□ 0.47
VCX3A-201ENST00000381089 DDX53Q86TM3 631 aaKnown RBP17.98■□□□□ 0.47
VCX3A-201ENST00000381089 CABP7Q86V35 215 aa17.98■□□□□ 0.47
VCX3A-201ENST00000381089 ZDHHC14Q8IZN3 488 aa17.98■□□□□ 0.47
VCX3A-201ENST00000381089 NIFKQ9BYG3 293 aaKnown RBP17.98■□□□□ 0.47
VCX3A-201ENST00000381089 SH3GLB2Q9NR46 395 aa17.98■□□□□ 0.47
VCX3A-201ENST00000381089 VPS54Q9P1Q0 977 aa17.98■□□□□ 0.47
VCX3A-201ENST00000381089 CDH22Q9UJ99 828 aa17.98■□□□□ 0.47
VCX3A-201ENST00000381089 PIN4Q9Y237 131 aaKnown RBP17.98■□□□□ 0.47
VCX3A-201ENST00000381089 IRAK3Q9Y616 596 aa17.98■□□□□ 0.47
VCX3A-201ENST00000381089 CSDE1O75534 798 aaKnown RBP17.97■□□□□ 0.47
VCX3A-201ENST00000381089 BRD1O95696 1058 aa17.97■□□□□ 0.47
VCX3A-201ENST00000381089 CPA1P15085 419 aa17.97■□□□□ 0.47
VCX3A-201ENST00000381089 Q4G0T1 1027 aa17.97■□□□□ 0.47
VCX3A-201ENST00000381089 NOMO2Q5JPE7 1267 aa17.97■□□□□ 0.47
VCX3A-201ENST00000381089 TRIM22Q8IYM9 498 aa17.97■□□□□ 0.47
VCX3A-201ENST00000381089 FBXL16Q8N461 479 aa17.97■□□□□ 0.47
VCX3A-201ENST00000381089 URGCPQ8TCY9 931 aa17.97■□□□□ 0.47
VCX3A-201ENST00000381089 ACSF2Q96CM8 615 aaPredicted RBP17.97■□□□□ 0.47
VCX3A-201ENST00000381089 PGBD4Q96DM1 585 aa17.97■□□□□ 0.47
VCX3A-201ENST00000381089 IGSF21Q96ID5 467 aa17.97■□□□□ 0.47
VCX3A-201ENST00000381089 SNX27Q96L92 541 aa17.97■□□□□ 0.47
VCX3A-201ENST00000381089 SUCLA2Q9P2R7 463 aaPredicted RBP17.97■□□□□ 0.47
VCX3A-201ENST00000381089 INPP5FQ9Y2H2 1132 aa17.97■□□□□ 0.47
VCX3A-201ENST00000381089 MYO10Q9HD67 2058 aa17.97■□□□□ 0.47
VCX3A-201ENST00000381089 A0A087WZ62 844 aa17.96■□□□□ 0.47
VCX3A-201ENST00000381089 IFNAR1P17181 557 aa17.96■□□□□ 0.47
VCX3A-201ENST00000381089 PSMA5P28066 241 aa17.96■□□□□ 0.47
VCX3A-201ENST00000381089 CATSPER4Q7RTX7 472 aa17.96■□□□□ 0.47
VCX3A-201ENST00000381089 RHPN2Q8IUC4 686 aa17.96■□□□□ 0.47
VCX3A-201ENST00000381089 TBCKQ8TEA7 893 aa17.96■□□□□ 0.47
VCX3A-201ENST00000381089 FDXACB1Q9BRP7 624 aaPredicted RBP17.96■□□□□ 0.47
VCX3A-201ENST00000381089 EMILIN2Q9BXX0 1053 aa17.96■□□□□ 0.47
VCX3A-201ENST00000381089 SFXN1Q9H9B4 322 aa17.96■□□□□ 0.47
VCX3A-201ENST00000381089 FAM105AQ9NUU6 356 aa17.96■□□□□ 0.47
VCX3A-201ENST00000381089 TBC1D13Q9NVG8 400 aa17.96■□□□□ 0.47
VCX3A-201ENST00000381089 LIMD1Q9UGP4 676 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms