RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 REEP2Q9BRK0 252 aa13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 TDRD3Q9H7E2 651 aaKnown RBP13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 EMSYQ7Z589 1322 aa13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 A0A087X0T9 212 aa13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 TFRCP02786 760 aaKnown RBP13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 MT-ND3P03897 115 aa13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 FAM228BP0C875 321 aa13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 RFX1P22670 979 aa13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 BASP1P80723 227 aaKnown RBP13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 MTERF2Q49AM1 385 aa13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 MIGA2Q7L4E1 593 aa13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 RFX6Q8HWS3 928 aa13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 TRIM59Q8IWR1 403 aa13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 NUP85Q9BW27 656 aa13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 DAGLAQ9Y4D2 1042 aa13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 VIRMAQ69YN4 1812 aaKnown RBP13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 WDR91A4D1P6 747 aa13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 ITPK1Q13572 414 aa13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 DCAF15Q66K64 600 aa13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 PROCA1Q8NCQ7 364 aaPredicted RBP13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 SYN2Q92777 582 aaPredicted RBP13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 NOP53Q9NZM5 478 aaKnown RBP13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 HESX1Q9UBX0 185 aa13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 NWD1Q149M9 1564 aa13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 FAM205AQ6ZU69 1335 aa13.65□□□□□ -0.23
DNMT3A-204ENST00000380756 IPO5O00410 1097 aaKnown RBP13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 PRLRP16471 622 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 SMARCA1P28370 1054 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 LRRC31Q6UY01 552 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 CENPUQ71F23 418 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 PODNQ7Z5L7 613 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 ADGRA1Q86SQ6 560 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 PDIK1LQ8N165 341 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 THOC1Q96FV9 657 aaKnown RBP13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 TRIM51Q9BSJ1 452 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 CALN1Q9BXU9 219 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 STK33Q9BYT3 514 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 SAYSD1Q9NPB0 183 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 INTS13Q9NVM9 706 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 PALM3A6NDB9 673 aaPredicted RBP13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 SLC16A4O15374 487 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 CD58P19256 250 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 TFAMQ00059 246 aaKnown RBP13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 MDM2Q00987 491 aaPredicted RBP13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 SPARCL1Q14515 664 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 KIAA1755Q5JYT7 1200 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 CENPPQ6IPU0 288 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 LRIG3Q6UXM1 1119 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 RNF34Q969K3 372 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 CDHR1Q96JP9 859 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 WNT8AQ9H1J5 351 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 KLC4Q9NSK0 619 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 MAPK13O15264 365 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 CDK17Q00537 523 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 LRRC14Q15048 493 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 TAF11Q15544 211 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 VPS72Q15906 364 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 GEN1Q17RS7 908 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 PDCD7Q8N8D1 485 aaKnown RBP13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 SLC35G2Q8TBE7 412 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 PYROXD1Q8WU10 500 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 LXNQ9BS40 222 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 SCINQ9Y6U3 715 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 K7ERI5 159 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 MCF2LO15068 1137 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 RAD17O75943 681 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 KLRK1P26718 216 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 PMS1P54277 932 aaKnown RBP13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 RPAINQ86UA6 219 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 ARHGAP20Q9P2F6 1191 aa13.64□□□□□ -0.23
DNMT3A-204ENST00000380756 ABCB11O95342 1321 aa13.63□□□□□ -0.23
DNMT3A-204ENST00000380756 SLC16A3O15427 465 aaKnown RBP13.63□□□□□ -0.23
DNMT3A-204ENST00000380756 CAV1Q03135 178 aa13.63□□□□□ -0.23
DNMT3A-204ENST00000380756 GRB10Q13322 594 aa13.63□□□□□ -0.23
DNMT3A-204ENST00000380756 RCN2Q14257 317 aa13.63□□□□□ -0.23
DNMT3A-204ENST00000380756 CCDC125Q86Z20 511 aa13.63□□□□□ -0.23
DNMT3A-204ENST00000380756 AGPAT1Q99943 283 aa13.63□□□□□ -0.23
DNMT3A-204ENST00000380756 NXF1Q9UBU9 619 aaKnown RBP13.63□□□□□ -0.23
DNMT3A-204ENST00000380756 P4HBP07237 508 aaKnown RBP13.63□□□□□ -0.23
DNMT3A-204ENST00000380756 MORC4Q8TE76 937 aa13.63□□□□□ -0.23
DNMT3A-204ENST00000380756 C11orf70Q9BRQ4 267 aa13.63□□□□□ -0.23
DNMT3A-204ENST00000380756 ISCUQ9H1K1 167 aa13.63□□□□□ -0.23
DNMT3A-204ENST00000380756 FMO5P49326 533 aa13.63□□□□□ -0.23
DNMT3A-204ENST00000380756 MTMR1Q13613 665 aa13.63□□□□□ -0.23
DNMT3A-204ENST00000380756 KRT39Q6A163 491 aa13.63□□□□□ -0.23
DNMT3A-204ENST00000380756 SMC1BQ8NDV3 1235 aa13.63□□□□□ -0.23
DNMT3A-204ENST00000380756 SEMA6BQ9H3T3 888 aa13.63□□□□□ -0.23
DNMT3A-204ENST00000380756 PITPNM2Q9BZ72 1349 aa13.63□□□□□ -0.23
DNMT3A-204ENST00000380756 LRRC10BA6NIK2 292 aa13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 INO80B-WBP1J3KQ70 363 aa13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 ASNSP08243 561 aa13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 ABCD1P33897 745 aa13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 QARSP47897 775 aaKnown RBP13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 EZH2Q15910 746 aaKnown RBP13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 CEP55Q53EZ4 464 aa13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 RINT1Q6NUQ1 792 aa13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 ARL8AQ96BM9 186 aa13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 INO80BQ9C086 356 aaPredicted RBP13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 JMJD4Q9H9V9 463 aa13.62□□□□□ -0.23
DNMT3A-204ENST00000380756 APEX2Q9UBZ4 518 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms