RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 HIBADHP31937 336 aaKnown RBP13.1□□□□□ -0.31
HERC6-203ENST00000380265 FXR2P51116 673 aaKnown RBP eCLIP13.1□□□□□ -0.31
HERC6-203ENST00000380265 ZDHHC24Q6UX98 284 aa13.1□□□□□ -0.31
HERC6-203ENST00000380265 EYA3Q99504 573 aa13.1□□□□□ -0.31
HERC6-203ENST00000380265 TRIM4Q9C037 500 aa13.1□□□□□ -0.31
HERC6-203ENST00000380265 NKX1-2Q9UD57 310 aaPredicted RBP13.1□□□□□ -0.31
HERC6-203ENST00000380265 AJAP1Q9UKB5 411 aaPredicted RBP13.1□□□□□ -0.31
HERC6-203ENST00000380265 ZMYND8Q9ULU4 1186 aaPredicted RBP13.1□□□□□ -0.31
HERC6-203ENST00000380265 PALM3A6NDB9 673 aaPredicted RBP13.1□□□□□ -0.31
HERC6-203ENST00000380265 SPDYE5A6NIY4 337 aa13.1□□□□□ -0.31
HERC6-203ENST00000380265 SPOPO43791 374 aa13.1□□□□□ -0.31
HERC6-203ENST00000380265 GCNT3O95395 438 aa13.1□□□□□ -0.31
HERC6-203ENST00000380265 DCAF12L1Q5VU92 463 aa13.1□□□□□ -0.31
HERC6-203ENST00000380265 ALG3Q92685 438 aa13.1□□□□□ -0.31
HERC6-203ENST00000380265 RUNDC3BQ96NL0 473 aa13.1□□□□□ -0.31
HERC6-203ENST00000380265 THAP2Q9H0W7 228 aa13.1□□□□□ -0.31
HERC6-203ENST00000380265 TXLNGQ9NUQ3 528 aa13.1□□□□□ -0.31
HERC6-203ENST00000380265 MTUS1Q9ULD2 1270 aa13.1□□□□□ -0.31
HERC6-203ENST00000380265 BCS1LQ9Y276 419 aa13.1□□□□□ -0.31
HERC6-203ENST00000380265 ATP5DP30049 168 aa13.09□□□□□ -0.31
HERC6-203ENST00000380265 CASP4P49662 377 aa13.09□□□□□ -0.31
HERC6-203ENST00000380265 DIXDC1Q155Q3 683 aa13.09□□□□□ -0.31
HERC6-203ENST00000380265 ARHGEF26Q96DR7 871 aa13.09□□□□□ -0.31
HERC6-203ENST00000380265 MTMR9Q96QG7 549 aa13.09□□□□□ -0.31
HERC6-203ENST00000380265 CARD9Q9H257 536 aa13.09□□□□□ -0.31
HERC6-203ENST00000380265 PARP4Q9UKK3 1724 aaKnown RBP13.09□□□□□ -0.31
HERC6-203ENST00000380265 THAP12O43422 761 aa13.09□□□□□ -0.31
HERC6-203ENST00000380265 LMNB1P20700 586 aa13.09□□□□□ -0.31
HERC6-203ENST00000380265 STAT3P40763 770 aa13.09□□□□□ -0.31
HERC6-203ENST00000380265 CASP5P51878 434 aa13.09□□□□□ -0.31
HERC6-203ENST00000380265 GRIPAP1Q4V328 841 aa13.09□□□□□ -0.31
HERC6-203ENST00000380265 C12orf60Q5U649 245 aa13.09□□□□□ -0.31
HERC6-203ENST00000380265 NT5C3AQ9H0P0 336 aa13.09□□□□□ -0.31
HERC6-203ENST00000380265 ARHGEF3Q9NR81 526 aa13.09□□□□□ -0.31
HERC6-203ENST00000380265 IGSF9BQ9UPX0 1349 aa13.09□□□□□ -0.31
HERC6-203ENST00000380265 STXBP5LQ9Y2K9 1186 aa13.09□□□□□ -0.31
HERC6-203ENST00000380265 POTEFA5A3E0 1075 aa13.09□□□□□ -0.31
HERC6-203ENST00000380265 USP17L5A8MUK1 530 aa13.09□□□□□ -0.31
HERC6-203ENST00000380265 ERVV-1B6SEH8 477 aa13.09□□□□□ -0.31
HERC6-203ENST00000380265 PHF2O75151 1096 aa13.09□□□□□ -0.31
HERC6-203ENST00000380265 POTEIP0CG38 1075 aa13.09□□□□□ -0.31
HERC6-203ENST00000380265 DRAP1Q14919 205 aaPredicted RBP13.09□□□□□ -0.31
HERC6-203ENST00000380265 NKX1-1Q15270 411 aaPredicted RBP13.09□□□□□ -0.31
HERC6-203ENST00000380265 ARMC3Q5W041 872 aa13.09□□□□□ -0.31
HERC6-203ENST00000380265 POTEGQ6S5H5 508 aa13.09□□□□□ -0.31
HERC6-203ENST00000380265 POTEEQ6S8J3 1075 aa13.09□□□□□ -0.31
HERC6-203ENST00000380265 SFR1Q86XK3 245 aa13.09□□□□□ -0.31
HERC6-203ENST00000380265 CCDC24Q8N4L8 307 aa13.09□□□□□ -0.31
HERC6-203ENST00000380265 RDH13Q8NBN7 331 aa13.09□□□□□ -0.31
HERC6-203ENST00000380265 SH3RF3Q8TEJ3 882 aaPredicted RBP13.09□□□□□ -0.31
HERC6-203ENST00000380265 ALG6Q9Y672 507 aa13.09□□□□□ -0.31
HERC6-203ENST00000380265 KCPQ6ZWJ8 1503 aa13.09□□□□□ -0.31
HERC6-203ENST00000380265 PASKQ96RG2 1323 aa13.08□□□□□ -0.31
HERC6-203ENST00000380265 KLHL33A6NCF5 533 aa13.08□□□□□ -0.31
HERC6-203ENST00000380265 PODXLO00592 558 aa13.08□□□□□ -0.31
HERC6-203ENST00000380265 CALUO43852 315 aaPredicted RBP13.08□□□□□ -0.31
HERC6-203ENST00000380265 RPL13P26373 211 aaKnown RBP13.08□□□□□ -0.31
HERC6-203ENST00000380265 CHRNA3P32297 505 aa13.08□□□□□ -0.31
HERC6-203ENST00000380265 MARCKSL1P49006 195 aa13.08□□□□□ -0.31
HERC6-203ENST00000380265 LRRC47Q8N1G4 583 aaKnown RBP13.08□□□□□ -0.31
HERC6-203ENST00000380265 PIGOQ8TEQ8 1089 aa13.08□□□□□ -0.31
HERC6-203ENST00000380265 KRT35Q92764 455 aa13.08□□□□□ -0.31
HERC6-203ENST00000380265 SLC4A9Q96Q91 983 aa13.08□□□□□ -0.31
HERC6-203ENST00000380265 CDC42EP4Q9H3Q1 356 aaKnown RBP13.08□□□□□ -0.31
HERC6-203ENST00000380265 DNAJC12Q9UKB3 198 aa13.08□□□□□ -0.31
HERC6-203ENST00000380265 C1orf167Q5SNV9 1468 aa13.08□□□□□ -0.32
HERC6-203ENST00000380265 SFI1A8K8P3 1242 aa13.08□□□□□ -0.32
HERC6-203ENST00000380265 AKAP3O75969 853 aa13.08□□□□□ -0.32
HERC6-203ENST00000380265 ALADP13716 330 aa13.08□□□□□ -0.32
HERC6-203ENST00000380265 SSR1P43307 286 aaKnown RBP13.08□□□□□ -0.32
HERC6-203ENST00000380265 POU5F1Q01860 360 aaKnown RBP13.08□□□□□ -0.32
HERC6-203ENST00000380265 KLC1Q07866 573 aa13.08□□□□□ -0.32
HERC6-203ENST00000380265 PDIA5Q14554 519 aa13.08□□□□□ -0.32
HERC6-203ENST00000380265 PLS1Q14651 629 aa13.08□□□□□ -0.32
HERC6-203ENST00000380265 KYNUQ16719 465 aa13.08□□□□□ -0.32
HERC6-203ENST00000380265 ZNF746Q6NUN9 644 aaPredicted RBP13.08□□□□□ -0.32
HERC6-203ENST00000380265 SLFN11Q7Z7L1 901 aa13.08□□□□□ -0.32
HERC6-203ENST00000380265 LNX1Q8TBB1 728 aaPredicted RBP13.08□□□□□ -0.32
HERC6-203ENST00000380265 SEC14L1Q92503 715 aa13.08□□□□□ -0.32
HERC6-203ENST00000380265 RPS6KC1Q96S38 1066 aa13.08□□□□□ -0.32
HERC6-203ENST00000380265 POP1Q99575 1024 aaKnown RBP13.08□□□□□ -0.32
HERC6-203ENST00000380265 VCXQ9H320 206 aa13.08□□□□□ -0.32
HERC6-203ENST00000380265 USP40Q9NVE5 1235 aa13.08□□□□□ -0.32
HERC6-203ENST00000380265 PFASO15067 1338 aa13.08□□□□□ -0.32
HERC6-203ENST00000380265 PHRF1Q9P1Y6 1649 aaKnown RBP13.08□□□□□ -0.32
HERC6-203ENST00000380265 TBCAO75347 108 aaKnown RBP13.08□□□□□ -0.32
HERC6-203ENST00000380265 IL6STP40189 918 aaPredicted RBP13.08□□□□□ -0.32
HERC6-203ENST00000380265 INHBEP58166 350 aa13.08□□□□□ -0.32
HERC6-203ENST00000380265 CNBD1Q8NA66 436 aa13.08□□□□□ -0.32
HERC6-203ENST00000380265 TXLNGYQ9BZA5 131 aa13.08□□□□□ -0.32
HERC6-203ENST00000380265 TAS2R14Q9NYV8 317 aa13.08□□□□□ -0.32
HERC6-203ENST00000380265 NUP188Q5SRE5 1749 aa13.08□□□□□ -0.32
HERC6-203ENST00000380265 ANKRD63C9JTQ0 380 aa13.07□□□□□ -0.32
HERC6-203ENST00000380265 DDX3YO15523 660 aaKnown RBP13.07□□□□□ -0.32
HERC6-203ENST00000380265 LGR5O75473 907 aa13.07□□□□□ -0.32
HERC6-203ENST00000380265 RARGP13631 454 aa13.07□□□□□ -0.32
HERC6-203ENST00000380265 CTTNQ14247 550 aaKnown RBP13.07□□□□□ -0.32
HERC6-203ENST00000380265 SBK1Q52WX2 424 aa13.07□□□□□ -0.32
HERC6-203ENST00000380265 ARHGEF18Q6ZSZ5 1173 aa13.07□□□□□ -0.32
HERC6-203ENST00000380265 TEX9Q8N6V9 391 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms