RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 MAML3Q96JK9 1138 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 RAB3IPQ96QF0 476 aaPredicted RBP8.06□□□□□ -1.12
CDKL5-201ENST00000379989 PYM1Q9BRP8 204 aaKnown RBP8.06□□□□□ -1.12
CDKL5-201ENST00000379989 RETREG1Q9H6L5 497 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 XDHP47989 1333 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 ROBO3Q96MS0 1386 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 WDR46O15213 610 aaKnown RBP8.06□□□□□ -1.12
CDKL5-201ENST00000379989 BIRC5O15392 142 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 FOXP2O15409 715 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 ACTN4O43707 911 aaKnown RBP8.06□□□□□ -1.12
CDKL5-201ENST00000379989 DDAH1O94760 285 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 ZCCHC18P0CG32 403 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 VAV1P15498 845 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 IFNAR1P17181 557 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 SERPINB3P29508 390 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 VHLP40337 213 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 PAFAH1B1P43034 410 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 EMP3P54852 163 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 KIF23Q02241 960 aaPredicted RBP8.06□□□□□ -1.12
CDKL5-201ENST00000379989 MAP7Q14244 749 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 KRT31Q15323 416 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 TRIM22Q8IYM9 498 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 FAM13CQ8NE31 585 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 DQX1Q8TE96 717 aaKnown RBP8.06□□□□□ -1.12
CDKL5-201ENST00000379989 MS4A14Q96JA4 679 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 DNAJC7Q99615 494 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 CRNKL1Q9BZJ0 848 aaKnown RBP8.06□□□□□ -1.12
CDKL5-201ENST00000379989 ADAM7Q9H2U9 754 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 LRP2BPQ9P2M1 347 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 RGS17Q9UGC6 210 aaPredicted RBP8.06□□□□□ -1.12
CDKL5-201ENST00000379989 MAGEB6P1A0A0J9YX57 407 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 PRPF3O43395 683 aaKnown RBP8.06□□□□□ -1.12
CDKL5-201ENST00000379989 LYNP07948 512 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 HOXA7P31268 230 aaPredicted RBP8.06□□□□□ -1.12
CDKL5-201ENST00000379989 HIBADHP31937 336 aaKnown RBP8.06□□□□□ -1.12
CDKL5-201ENST00000379989 PPP4CP60510 307 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 RASSF7Q02833 373 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 DMPKQ09013 629 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 TRIM29Q14134 588 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 SCARF1Q14162 830 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 KRT72Q14CN4 511 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 TSR1Q2NL82 804 aaKnown RBP8.06□□□□□ -1.12
CDKL5-201ENST00000379989 FAM47EQ6ZV65 393 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 ZNF804AQ7Z570 1209 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.06□□□□□ -1.12
CDKL5-201ENST00000379989 TUBGCP5Q96RT8 1024 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 VPS16Q9H269 839 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 DPH5Q9H2P9 285 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 TUT1Q9H6E5 874 aaKnown RBP8.06□□□□□ -1.12
CDKL5-201ENST00000379989 ETNK1Q9HBU6 452 aa8.06□□□□□ -1.12
CDKL5-201ENST00000379989 USP15Q9Y4E8 981 aaPredicted RBP8.06□□□□□ -1.12
CDKL5-201ENST00000379989 TMEM110-MUSTN1A8MSY1 372 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 PLSCR1O15162 318 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 SPTLC1O15269 473 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 ZBTB43O43298 467 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 NCK2O43639 380 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 COL6A2P12110 1019 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 OCRLQ01968 901 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 CYP27A1Q02318 531 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 PARP6Q2NL67 630 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 KRT71Q3SY84 523 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 ERFEQ4G0M1 354 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 NEPROQ6NW34 567 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 TTC30AQ86WT1 665 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 VPS37DQ86XT2 251 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 TREML1Q86YW5 311 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 RIBC1Q8N443 379 aaPredicted RBP8.05□□□□□ -1.12
CDKL5-201ENST00000379989 NRG4Q8WWG1 115 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 SCG3Q8WXD2 468 aaKnown RBP8.05□□□□□ -1.12
CDKL5-201ENST00000379989 ANKS1AQ92625 1134 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 HNRNPABQ99729 332 aaKnown RBP8.05□□□□□ -1.12
CDKL5-201ENST00000379989 CENPKQ9BS16 269 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 THAP9Q9H5L6 903 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 SERPINB7O75635 380 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 TPPPO94811 219 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 UNC5CO95185 931 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 AFPP02771 609 aaKnown RBP8.05□□□□□ -1.12
CDKL5-201ENST00000379989 PMS2P54278 862 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 PSMC1P62191 440 aaKnown RBP8.05□□□□□ -1.12
CDKL5-201ENST00000379989 ZNF772Q68DY9 489 aaPredicted RBP8.05□□□□□ -1.12
CDKL5-201ENST00000379989 ANKLE1Q8NAG6 615 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 DIS3LQ8TF46 1054 aaKnown RBP8.05□□□□□ -1.12
CDKL5-201ENST00000379989 PRMT1Q99873 361 aaKnown RBP8.05□□□□□ -1.12
CDKL5-201ENST00000379989 CCDC134Q9H6E4 229 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 MLXIPQ9HAP2 919 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 RXFP1Q9HBX9 757 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 FAM114A2Q9NRY5 505 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 FBXL5Q9UKA1 691 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 A0A0G2JS52 829 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 KLF18A0A0U1RQI7 1052 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 KANSL1LA0AUZ9 987 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 GSG1L2A8MUP6 293 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 ENTPD5O75356 428 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 POTEJP0CG39 1038 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 TCF7P36402 384 aaPredicted RBP8.05□□□□□ -1.12
CDKL5-201ENST00000379989 SKIV2L2P42285 1042 aaKnown RBP8.05□□□□□ -1.12
CDKL5-201ENST00000379989 METAP2P50579 478 aaKnown RBP eCLIP8.05□□□□□ -1.12
CDKL5-201ENST00000379989 CDK7P50613 346 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 PDE1BQ01064 536 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 FOXD4Q12950 439 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms