RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 ADKP55263 362 aaKnown RBP7.08□□□□□ -1.28
NEDD9-202ENST00000379446 ANO4Q32M45 955 aa7.08□□□□□ -1.28
NEDD9-202ENST00000379446 TRIM60Q495X7 471 aa7.08□□□□□ -1.28
NEDD9-202ENST00000379446 CCDC149Q6ZUS6 474 aa7.08□□□□□ -1.28
NEDD9-202ENST00000379446 TICAM2Q86XR7 235 aa7.08□□□□□ -1.28
NEDD9-202ENST00000379446 PPP1R13BQ96KQ4 1090 aa7.08□□□□□ -1.28
NEDD9-202ENST00000379446 RIPOR3Q96MK2 946 aa7.08□□□□□ -1.28
NEDD9-202ENST00000379446 TSNARE1Q96NA8 513 aa7.08□□□□□ -1.28
NEDD9-202ENST00000379446 MYCBPQ99417 103 aaPredicted RBP7.08□□□□□ -1.28
NEDD9-202ENST00000379446 ADAM2Q99965 735 aa7.08□□□□□ -1.28
NEDD9-202ENST00000379446 DESI2Q9BSY9 194 aa7.08□□□□□ -1.28
NEDD9-202ENST00000379446 PLA2G12BQ9BX93 195 aa7.08□□□□□ -1.28
NEDD9-202ENST00000379446 MRPL9Q9BYD2 267 aaKnown RBP7.08□□□□□ -1.28
NEDD9-202ENST00000379446 ALDH8A1Q9H2A2 487 aaPredicted RBP7.08□□□□□ -1.28
NEDD9-202ENST00000379446 PRDM12Q9H4Q4 367 aa7.08□□□□□ -1.28
NEDD9-202ENST00000379446 ATP2C2O75185 946 aa7.08□□□□□ -1.28
NEDD9-202ENST00000379446 LIG3P49916 1009 aa7.08□□□□□ -1.28
NEDD9-202ENST00000379446 PLCB4Q15147 1175 aa7.08□□□□□ -1.28
NEDD9-202ENST00000379446 ARHGAP44Q17R89 818 aa7.08□□□□□ -1.28
NEDD9-202ENST00000379446 TMEM143Q96AN5 459 aa7.08□□□□□ -1.28
NEDD9-202ENST00000379446 LCMT1Q9UIC8 334 aa7.08□□□□□ -1.28
NEDD9-202ENST00000379446 GMEB2Q9UKD1 530 aa7.08□□□□□ -1.28
NEDD9-202ENST00000379446 USTQ9Y2C2 406 aa7.08□□□□□ -1.28
NEDD9-202ENST00000379446 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.08□□□□□ -1.282e-8■■□□□ 11.9
NEDD9-202ENST00000379446 CSF1RP07333 972 aa7.08□□□□□ -1.28
NEDD9-202ENST00000379446 QARSP47897 775 aaKnown RBP7.08□□□□□ -1.28
NEDD9-202ENST00000379446 AP3B2Q13367 1082 aa7.08□□□□□ -1.28
NEDD9-202ENST00000379446 LY6KQ17RY6 165 aa7.08□□□□□ -1.28
NEDD9-202ENST00000379446 CDR2LQ86X02 465 aaPredicted RBP7.08□□□□□ -1.28
NEDD9-202ENST00000379446 TBC1D10CQ8IV04 446 aa7.08□□□□□ -1.28
NEDD9-202ENST00000379446 PDCD6IPQ8WUM4 868 aaKnown RBP7.08□□□□□ -1.28
NEDD9-202ENST00000379446 ATXN3LQ9H3M9 355 aa7.08□□□□□ -1.28
NEDD9-202ENST00000379446 ABI2Q9NYB9 513 aaPredicted RBP7.08□□□□□ -1.28
NEDD9-202ENST00000379446 AKAP7Q9P0M2 348 aaPredicted RBP7.08□□□□□ -1.28
NEDD9-202ENST00000379446 NFE2L3Q9Y4A8 694 aa7.08□□□□□ -1.28
NEDD9-202ENST00000379446 PCDHA5Q9Y5H7 936 aa7.08□□□□□ -1.28
NEDD9-202ENST00000379446 SYNGAP1Q96PV0 1343 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 A0A1W2PQ27 194 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 A0A1W2PQ64 194 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 A0A1W2PQD8 194 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 GOLGA6L9A6NEM1 432 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 IL1R1P14778 569 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 GCFC2P16383 781 aaKnown RBP7.07□□□□□ -1.28
NEDD9-202ENST00000379446 CMA1P23946 247 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 KLRC1P26715 233 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 RAD51Q06609 339 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 PPP2R5CQ13362 524 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 HIC1Q14526 733 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 CEP55Q53EZ4 464 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 ICE2Q659A1 982 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 GET4Q7L5D6 327 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-202ENST00000379446 TRIM50Q86XT4 487 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 LRRN4CLQ8ND94 238 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 APPL2Q8NEU8 664 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 SCFD1Q8WVM8 642 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 ACAP3Q96P50 834 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 C11orf84Q9BUA3 381 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-202ENST00000379446 ABCG4Q9H172 646 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 SERTAD1Q9UHV2 236 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 G3BP2Q9UN86 482 aaKnown RBP7.07□□□□□ -1.28
NEDD9-202ENST00000379446 PTPN22Q9Y2R2 807 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 CTIFO43310 598 aaKnown RBP7.07□□□□□ -1.28
NEDD9-202ENST00000379446 CLCN3P51790 818 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 EPHB3P54753 998 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 SFSWAPQ12872 951 aaKnown RBP7.07□□□□□ -1.28
NEDD9-202ENST00000379446 PTGDRQ13258 359 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 RNF187Q5TA31 235 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-202ENST00000379446 APOA5Q6Q788 366 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 SARM1Q6SZW1 724 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 CYB5R4Q7L1T6 521 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 ATOH1Q92858 354 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-202ENST00000379446 CIPCQ9C0C6 399 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 PORCNQ9H237 461 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 BHMT2Q9H2M3 363 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 SENP2Q9HC62 589 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 GOLGA4Q13439 2230 aaKnown RBP7.07□□□□□ -1.28
NEDD9-202ENST00000379446 PIK3C2AO00443 1686 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 ZNF233A6NK53 670 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 PSMC5P62195 406 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 CCZ1BP86790 482 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 CCZ1P86791 482 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-202ENST00000379446 SLC39A14Q15043 492 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 APOBEC3HQ6NTF7 200 aaKnown RBP7.07□□□□□ -1.28
NEDD9-202ENST00000379446 GPIHBP1Q8IV16 184 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 ZFPM1Q8IX07 1006 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 PPM1KQ8N3J5 372 aa7.07□□□□□ -1.28
NEDD9-202ENST00000379446 L3MBTL3Q96JM7 780 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-202ENST00000379446 HEXIM2Q96MH2 286 aaKnown RBP7.07□□□□□ -1.28
NEDD9-202ENST00000379446 POLR3FQ9H1D9 316 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-202ENST00000379446 FRMD3A2A2Y4 597 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 VWA5AO00534 786 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 GAS2O43903 313 aaKnown RBP7.06□□□□□ -1.28
NEDD9-202ENST00000379446 VTNP04004 478 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 PPM1AP35813 382 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 SF3A3Q12874 501 aaKnown RBP eCLIP7.06□□□□□ -1.284e-6■■□□□ 12.2
NEDD9-202ENST00000379446 CTXN3Q4LDR2 81 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 GALNT17Q6IS24 598 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 PDZD4Q76G19 769 aaPredicted RBP7.06□□□□□ -1.28
NEDD9-202ENST00000379446 NME8Q8N427 588 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 STKLD1Q8NE28 680 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms