RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 ORC6Q9Y5N6 252 aa11.69□□□□□ -0.54
LINC00654-201ENST00000379053 ARHGEF5Q12774 1597 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 GGPS1O95749 300 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 CALB1P05937 261 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 IFNA8P32881 189 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 TGFB2P61812 414 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 SPATA2LQ8IUW3 424 aaPredicted RBP11.68□□□□□ -0.54
LINC00654-201ENST00000379053 LRRC8AQ8IWT6 810 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 MAGEB5Q9BZ81 275 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 RRAGCQ9HB90 399 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 ZNF853P0CG23 659 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 TAC1P20366 129 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 GRIK1P39086 918 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 PRR5LQ6MZQ0 368 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 TNS4Q8IZW8 715 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 MB21D1Q8N884 522 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 ENAHQ8N8S7 591 aaPredicted RBP11.68□□□□□ -0.54
LINC00654-201ENST00000379053 PPWD1Q96BP3 646 aaKnown RBP11.68□□□□□ -0.54
LINC00654-201ENST00000379053 DDX50Q9BQ39 737 aaKnown RBP11.68□□□□□ -0.54
LINC00654-201ENST00000379053 SAMSN1Q9NSI8 373 aaKnown RBP11.68□□□□□ -0.54
LINC00654-201ENST00000379053 TJP2Q9UDY2 1190 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 CNOT8Q9UFF9 292 aaKnown RBP11.68□□□□□ -0.54
LINC00654-201ENST00000379053 IKBKBO14920 756 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 SMIM24O75264 130 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 TJP3O95049 919 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 TBXAS1P24557 533 aaPredicted RBP11.68□□□□□ -0.54
LINC00654-201ENST00000379053 ATICP31939 592 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 IER5Q5VY09 327 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 ALKBH5Q6P6C2 394 aaKnown RBP11.68□□□□□ -0.54
LINC00654-201ENST00000379053 DEFB132Q7Z7B7 95 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 LRRC43Q8N309 656 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 ANAPC7Q9UJX3 599 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 LSM7Q9UK45 103 aaKnown RBP11.68□□□□□ -0.54
LINC00654-201ENST00000379053 A2ML1A8K2U0 1454 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 GH1P01241 217 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 DPEP1P16444 411 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 INPP1P49441 399 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 TBCCQ15814 346 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 KYAT1Q16773 422 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 MUM1Q2TAK8 710 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 EFHC2Q5JST6 749 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 INTS9Q9NV88 658 aaKnown RBP11.68□□□□□ -0.54
LINC00654-201ENST00000379053 SAMD9LQ8IVG5 1584 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 ARHGAP31Q2M1Z3 1444 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 OCRLQ01968 901 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 SLFNL1Q499Z3 407 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 RNF180Q86T96 592 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 RHOT2Q8IXI1 618 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 SRRM1Q8IYB3 904 aaKnown RBP11.68□□□□□ -0.54
LINC00654-201ENST00000379053 PYROXD1Q8WU10 500 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 RAD54LQ92698 747 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 PBXIP1Q96AQ6 731 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 PBKQ96KB5 322 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 NUDT12Q9BQG2 462 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 NHEJ1Q9H9Q4 299 aaPredicted RBP11.68□□□□□ -0.54
LINC00654-201ENST00000379053 SLC4A7Q9Y6M7 1214 aa11.68□□□□□ -0.54
LINC00654-201ENST00000379053 CDK12Q9NYV4 1490 aaPredicted RBP11.67□□□□□ -0.54
LINC00654-201ENST00000379053 SSTR3P32745 418 aaPredicted RBP11.67□□□□□ -0.54
LINC00654-201ENST00000379053 FBXL13Q8NEE6 735 aa11.67□□□□□ -0.54
LINC00654-201ENST00000379053 C11orf70Q9BRQ4 267 aa11.67□□□□□ -0.54
LINC00654-201ENST00000379053 TACO1Q9BSH4 297 aaKnown RBP11.67□□□□□ -0.54
LINC00654-201ENST00000379053 EPB41L5Q9HCM4 733 aa11.67□□□□□ -0.54
LINC00654-201ENST00000379053 SPTLC3Q9NUV7 552 aa11.67□□□□□ -0.54
LINC00654-201ENST00000379053 ZNF70Q9UC06 446 aaPredicted RBP11.67□□□□□ -0.54
LINC00654-201ENST00000379053 E5RI56 91 aa11.67□□□□□ -0.54
LINC00654-201ENST00000379053 PRRG1O14668 218 aa11.67□□□□□ -0.54
LINC00654-201ENST00000379053 PPP1R12AO14974 1030 aaPredicted RBP11.67□□□□□ -0.54
LINC00654-201ENST00000379053 CXCR5P32302 372 aa11.67□□□□□ -0.54
LINC00654-201ENST00000379053 CDC42EP1Q00587 391 aa11.67□□□□□ -0.54
LINC00654-201ENST00000379053 HABP4Q5JVS0 413 aaKnown RBP11.67□□□□□ -0.54
LINC00654-201ENST00000379053 RSBN1LQ6PCB5 846 aaPredicted RBP11.67□□□□□ -0.54
LINC00654-201ENST00000379053 TADA2BQ86TJ2 420 aa11.67□□□□□ -0.54
LINC00654-201ENST00000379053 LPAR1Q92633 364 aa11.67□□□□□ -0.54
LINC00654-201ENST00000379053 SAAL1Q96ER3 474 aa11.67□□□□□ -0.54
LINC00654-201ENST00000379053 ZBTB18Q99592 522 aa11.67□□□□□ -0.54
LINC00654-201ENST00000379053 TRIM62Q9BVG3 475 aa11.67□□□□□ -0.54
LINC00654-201ENST00000379053 MXD3Q9BW11 206 aa11.67□□□□□ -0.54
LINC00654-201ENST00000379053 Q9H521 79 aa11.67□□□□□ -0.54
LINC00654-201ENST00000379053 RBAKQ9NYW8 714 aaPredicted RBP11.67□□□□□ -0.54
LINC00654-201ENST00000379053 TBK1Q9UHD2 729 aa11.67□□□□□ -0.54
LINC00654-201ENST00000379053 DOLKQ9UPQ8 538 aa11.67□□□□□ -0.54
LINC00654-201ENST00000379053 POTEFA5A3E0 1075 aa11.67□□□□□ -0.54
LINC00654-201ENST00000379053 POTEIP0CG38 1075 aa11.67□□□□□ -0.54
LINC00654-201ENST00000379053 EFNA5P52803 228 aa11.67□□□□□ -0.54
LINC00654-201ENST00000379053 ZSCAN26Q16670 478 aa11.67□□□□□ -0.54
LINC00654-201ENST00000379053 POTEGQ6S5H5 508 aa11.67□□□□□ -0.54
LINC00654-201ENST00000379053 POTEEQ6S8J3 1075 aa11.67□□□□□ -0.54
LINC00654-201ENST00000379053 CENPUQ71F23 418 aa11.67□□□□□ -0.54
LINC00654-201ENST00000379053 SCG3Q8WXD2 468 aaKnown RBP11.67□□□□□ -0.54
LINC00654-201ENST00000379053 EPS15L1Q9UBC2 864 aa11.67□□□□□ -0.54
LINC00654-201ENST00000379053 ADAMTS1Q9UHI8 967 aa11.67□□□□□ -0.54
LINC00654-201ENST00000379053 ZC3H4Q9UPT8 1303 aaKnown RBP11.67□□□□□ -0.54
LINC00654-201ENST00000379053 EXOC1LA0A1B0GW35 172 aa11.67□□□□□ -0.54
LINC00654-201ENST00000379053 RPS12P25398 132 aaKnown RBP11.67□□□□□ -0.54
LINC00654-201ENST00000379053 THEMIS2Q5TEJ8 643 aa11.67□□□□□ -0.54
LINC00654-201ENST00000379053 ENGASEQ8NFI3 743 aa11.67□□□□□ -0.54
LINC00654-201ENST00000379053 GPRC5AQ8NFJ5 357 aa11.67□□□□□ -0.54
LINC00654-201ENST00000379053 ULK4Q96C45 1275 aa11.67□□□□□ -0.54
LINC00654-201ENST00000379053 DDX27Q96GQ7 796 aaKnown RBP11.67□□□□□ -0.54
LINC00654-201ENST00000379053 TNIP3Q96KP6 325 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms