RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 KATNBL1Q9H079 304 aa19.01■□□□□ 0.63
THUMPD2-201ENST00000378727 FRMD4BQ9Y2L6 1034 aa19.01■□□□□ 0.63
THUMPD2-201ENST00000378727 NOP56O00567 594 aaKnown RBP19■□□□□ 0.63
THUMPD2-201ENST00000378727 EXOC3O60645 756 aa19■□□□□ 0.63
THUMPD2-201ENST00000378727 CCDC175P0C221 793 aa19■□□□□ 0.63
THUMPD2-201ENST00000378727 HNRNPH3P31942 346 aaKnown RBP19■□□□□ 0.63
THUMPD2-201ENST00000378727 TSR1Q2NL82 804 aaKnown RBP19■□□□□ 0.63
THUMPD2-201ENST00000378727 TCERG1LQ5VWI1 586 aa19■□□□□ 0.63
THUMPD2-201ENST00000378727 MAP4K3Q8IVH8 894 aa19■□□□□ 0.63
THUMPD2-201ENST00000378727 TMEM143Q96AN5 459 aa19■□□□□ 0.63
THUMPD2-201ENST00000378727 HVCN1Q96D96 273 aa19■□□□□ 0.63
THUMPD2-201ENST00000378727 EDEM3Q9BZQ6 932 aa19■□□□□ 0.63
THUMPD2-201ENST00000378727 PCIF1Q9H4Z3 704 aa19■□□□□ 0.63
THUMPD2-201ENST00000378727 NRBP2Q9NSY0 501 aa19■□□□□ 0.63
THUMPD2-201ENST00000378727 CGNQ9P2M7 1197 aaKnown RBP19■□□□□ 0.63
THUMPD2-201ENST00000378727 CPA4Q9UI42 421 aa19■□□□□ 0.63
THUMPD2-201ENST00000378727 A0A0U1RQJ8 604 aa18.99■□□□□ 0.63
THUMPD2-201ENST00000378727 TRIM65Q6PJ69 517 aa18.99■□□□□ 0.63
THUMPD2-201ENST00000378727 MAMDC4Q6UXC1 1216 aa18.99■□□□□ 0.63
THUMPD2-201ENST00000378727 PLEKHH3Q7Z736 793 aa18.99■□□□□ 0.63
THUMPD2-201ENST00000378727 ACRBPQ8NEB7 543 aa18.99■□□□□ 0.63
THUMPD2-201ENST00000378727 ATRIPQ8WXE1 791 aa18.99■□□□□ 0.63
THUMPD2-201ENST00000378727 AZI2Q9H6S1 392 aa18.99■□□□□ 0.63
THUMPD2-201ENST00000378727 PLAGL2Q9UPG8 496 aa18.99■□□□□ 0.63
THUMPD2-201ENST00000378727 ANKRD63C9JTQ0 380 aa18.99■□□□□ 0.63
THUMPD2-201ENST00000378727 SNAI1O95863 264 aaPredicted RBP18.99■□□□□ 0.63
THUMPD2-201ENST00000378727 MAPK4P31152 587 aa18.99■□□□□ 0.63
THUMPD2-201ENST00000378727 SNRPFP62306 86 aaKnown RBP18.99■□□□□ 0.63
THUMPD2-201ENST00000378727 TAS1R3Q7RTX0 852 aa18.99■□□□□ 0.63
THUMPD2-201ENST00000378727 ZSWIM2Q8NEG5 633 aa18.99■□□□□ 0.63
THUMPD2-201ENST00000378727 GLG1Q92896 1179 aa18.99■□□□□ 0.63
THUMPD2-201ENST00000378727 VTA1Q9NP79 307 aa18.99■□□□□ 0.63
THUMPD2-201ENST00000378727 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.99■□□□□ 0.63
THUMPD2-201ENST00000378727 CEP72Q9P209 647 aa18.99■□□□□ 0.63
THUMPD2-201ENST00000378727 ARHGAP28Q9P2N2 729 aa18.99■□□□□ 0.63
THUMPD2-201ENST00000378727 EMSYQ7Z589 1322 aa18.99■□□□□ 0.63
THUMPD2-201ENST00000378727 PASKQ96RG2 1323 aa18.99■□□□□ 0.63
THUMPD2-201ENST00000378727 RBM47A0AV96 593 aaKnown RBP18.98■□□□□ 0.63
THUMPD2-201ENST00000378727 MANSC4A6NHS7 340 aaPredicted RBP18.98■□□□□ 0.63
THUMPD2-201ENST00000378727 LRRC53A6NM62 1247 aa18.98■□□□□ 0.63
THUMPD2-201ENST00000378727 MARK3P27448 753 aa18.98■□□□□ 0.63
THUMPD2-201ENST00000378727 ADSSP30520 456 aa18.98■□□□□ 0.63
THUMPD2-201ENST00000378727 ARL2P36404 184 aa18.98■□□□□ 0.63
THUMPD2-201ENST00000378727 CDK17Q00537 523 aa18.98■□□□□ 0.63
THUMPD2-201ENST00000378727 ARHGAP1Q07960 439 aa18.98■□□□□ 0.63
THUMPD2-201ENST00000378727 GJC2Q5T442 439 aaPredicted RBP18.98■□□□□ 0.63
THUMPD2-201ENST00000378727 RGMBQ6NW40 437 aa18.98■□□□□ 0.63
THUMPD2-201ENST00000378727 RRAGAQ7L523 313 aa18.98■□□□□ 0.63
THUMPD2-201ENST00000378727 PLPPR4Q7Z2D5 763 aa18.98■□□□□ 0.63
THUMPD2-201ENST00000378727 DPP9Q86TI2 863 aa18.98■□□□□ 0.63
THUMPD2-201ENST00000378727 ASAP3Q8TDY4 903 aa18.98■□□□□ 0.63
THUMPD2-201ENST00000378727 SLC7A3Q8WY07 619 aa18.98■□□□□ 0.63
THUMPD2-201ENST00000378727 MAML3Q96JK9 1138 aa18.98■□□□□ 0.63
THUMPD2-201ENST00000378727 IFT74Q96LB3 600 aa18.98■□□□□ 0.63
THUMPD2-201ENST00000378727 GANQ9H2C0 597 aa18.98■□□□□ 0.63
THUMPD2-201ENST00000378727 ZNHIT6Q9NWK9 470 aaKnown RBP18.98■□□□□ 0.63
THUMPD2-201ENST00000378727 HSPBP1Q9NZL4 362 aa18.98■□□□□ 0.63
THUMPD2-201ENST00000378727 EXOC7Q9UPT5 735 aa18.98■□□□□ 0.63
THUMPD2-201ENST00000378727 EPN1Q9Y6I3 576 aaPredicted RBP18.98■□□□□ 0.63
THUMPD2-201ENST00000378727 ZNF236Q9UL36 1845 aa18.98■□□□□ 0.63
THUMPD2-201ENST00000378727 KIF2AO00139 706 aaPredicted RBP18.97■□□□□ 0.63
THUMPD2-201ENST00000378727 NDUFA10O95299 355 aa18.97■□□□□ 0.63
THUMPD2-201ENST00000378727 SLC9A1P19634 815 aa18.97■□□□□ 0.63
THUMPD2-201ENST00000378727 GLRA2P23416 452 aa18.97■□□□□ 0.63
THUMPD2-201ENST00000378727 RFC5P40937 340 aa18.97■□□□□ 0.63
THUMPD2-201ENST00000378727 SLC39A4Q6P5W5 647 aa18.97■□□□□ 0.63
THUMPD2-201ENST00000378727 PDXDC1Q6P996 788 aa18.97■□□□□ 0.63
THUMPD2-201ENST00000378727 RDH13Q8NBN7 331 aa18.97■□□□□ 0.63
THUMPD2-201ENST00000378727 BBXQ8WY36 941 aaPredicted RBP18.97■□□□□ 0.63
THUMPD2-201ENST00000378727 ZNF592Q92610 1267 aa18.97■□□□□ 0.63
THUMPD2-201ENST00000378727 FAM167AQ96KS9 214 aa18.97■□□□□ 0.63
THUMPD2-201ENST00000378727 NLRC4Q9NPP4 1024 aa18.97■□□□□ 0.63
THUMPD2-201ENST00000378727 REXO2Q9Y3B8 237 aaKnown RBP18.97■□□□□ 0.63
THUMPD2-201ENST00000378727 DOCK3Q8IZD9 2030 aa18.97■□□□□ 0.63
THUMPD2-201ENST00000378727 GOLGA6L9A6NEM1 432 aa18.97■□□□□ 0.63
THUMPD2-201ENST00000378727 ZBTB42B2RXF5 422 aa18.97■□□□□ 0.63
THUMPD2-201ENST00000378727 ACTN1P12814 892 aa18.97■□□□□ 0.63
THUMPD2-201ENST00000378727 PON1P27169 355 aa18.97■□□□□ 0.63
THUMPD2-201ENST00000378727 CNGA1P29973 690 aa18.97■□□□□ 0.63
THUMPD2-201ENST00000378727 POLR2FP61218 127 aaKnown RBP18.97■□□□□ 0.63
THUMPD2-201ENST00000378727 PPP2R5AQ15172 486 aa18.97■□□□□ 0.63
THUMPD2-201ENST00000378727 EXOC3L4Q17RC7 722 aa18.97■□□□□ 0.63
THUMPD2-201ENST00000378727 CACNA2D4Q7Z3S7 1137 aa18.97■□□□□ 0.63
THUMPD2-201ENST00000378727 XXYLT1Q8NBI6 393 aa18.97■□□□□ 0.63
THUMPD2-201ENST00000378727 NPLOC4Q8TAT6 608 aa18.97■□□□□ 0.63
THUMPD2-201ENST00000378727 PRIMPOLQ96LW4 560 aa18.97■□□□□ 0.63
THUMPD2-201ENST00000378727 SIP14410 1827 aa18.97■□□□□ 0.63
THUMPD2-201ENST00000378727 MAFO75444 373 aaPredicted RBP18.96■□□□□ 0.63
THUMPD2-201ENST00000378727 TRIM49P0CI25 452 aa18.96■□□□□ 0.63
THUMPD2-201ENST00000378727 TRIM49CP0CI26 452 aa18.96■□□□□ 0.63
THUMPD2-201ENST00000378727 ETF1P62495 437 aaKnown RBP18.96■□□□□ 0.63
THUMPD2-201ENST00000378727 BFSP1Q12934 665 aa18.96■□□□□ 0.63
THUMPD2-201ENST00000378727 PLCB4Q15147 1175 aa18.96■□□□□ 0.63
THUMPD2-201ENST00000378727 SYT10Q6XYQ8 523 aa18.96■□□□□ 0.63
THUMPD2-201ENST00000378727 ATP8B4Q8TF62 1192 aa18.96■□□□□ 0.63
THUMPD2-201ENST00000378727 NHEJ1Q9H9Q4 299 aaPredicted RBP18.96■□□□□ 0.63
THUMPD2-201ENST00000378727 ZCCHC17Q9NP64 241 aaKnown RBP18.96■□□□□ 0.63
THUMPD2-201ENST00000378727 PLCB1Q9NQ66 1216 aa18.96■□□□□ 0.63
THUMPD2-201ENST00000378727 GTPBP10A4D1E9 387 aaKnown RBP18.96■□□□□ 0.63
THUMPD2-201ENST00000378727 SLC15A5A6NIM6 579 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms