RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 COL9A1P20849 921 aa18.98■□□□□ 0.63
RER1-202ENST00000378512 MUTP22033 750 aa18.98■□□□□ 0.63
RER1-202ENST00000378512 RPA1P27694 616 aa18.98■□□□□ 0.63
RER1-202ENST00000378512 BMPR1AP36894 532 aa18.98■□□□□ 0.63
RER1-202ENST00000378512 PRPHP41219 470 aa18.98■□□□□ 0.63
RER1-202ENST00000378512 RARRES1P49788 294 aa18.98■□□□□ 0.63
RER1-202ENST00000378512 PTGDRQ13258 359 aa18.98■□□□□ 0.63
RER1-202ENST00000378512 BTG3Q14201 252 aaPredicted RBP18.98■□□□□ 0.63
RER1-202ENST00000378512 PDIA5Q14554 519 aa18.98■□□□□ 0.63
RER1-202ENST00000378512 PTPROQ16827 1216 aa18.98■□□□□ 0.63
RER1-202ENST00000378512 PAN2Q504Q3 1202 aaKnown RBP18.98■□□□□ 0.63
RER1-202ENST00000378512 XKR9Q5GH70 373 aa18.98■□□□□ 0.63
RER1-202ENST00000378512 SLC24A5Q71RS6 500 aa18.98■□□□□ 0.63
RER1-202ENST00000378512 CLP1Q92989 425 aaKnown RBP18.98■□□□□ 0.63
RER1-202ENST00000378512 INTS4Q96HW7 963 aaKnown RBP18.98■□□□□ 0.63
RER1-202ENST00000378512 ADAM2Q99965 735 aa18.98■□□□□ 0.63
RER1-202ENST00000378512 IFT122Q9HBG6 1241 aa18.98■□□□□ 0.63
RER1-202ENST00000378512 XPNPEP1Q9NQW7 623 aa18.98■□□□□ 0.63
RER1-202ENST00000378512 A0A087WZ62 844 aa18.97■□□□□ 0.63
RER1-202ENST00000378512 C5orf67F2Z3F1 127 aa18.97■□□□□ 0.63
RER1-202ENST00000378512 IL9P15248 144 aa18.97■□□□□ 0.63
RER1-202ENST00000378512 POLGP54098 1239 aaPredicted RBP18.97■□□□□ 0.63
RER1-202ENST00000378512 EMC2Q15006 297 aa18.97■□□□□ 0.63
RER1-202ENST00000378512 LARP1BQ659C4 914 aaKnown RBP18.97■□□□□ 0.63
RER1-202ENST00000378512 RHPN2Q8IUC4 686 aa18.97■□□□□ 0.63
RER1-202ENST00000378512 FDXACB1Q9BRP7 624 aaPredicted RBP18.97■□□□□ 0.63
RER1-202ENST00000378512 GCOM2Q9BZD3 368 aaPredicted RBP18.97■□□□□ 0.63
RER1-202ENST00000378512 ELAC1Q9H777 363 aaKnown RBP18.97■□□□□ 0.63
RER1-202ENST00000378512 DBR1Q9UK59 544 aaKnown RBP18.97■□□□□ 0.63
RER1-202ENST00000378512 MYO7AQ13402 2215 aa18.97■□□□□ 0.63
RER1-202ENST00000378512 H3BQV1 296 aa18.96■□□□□ 0.63
RER1-202ENST00000378512 DGAT1O75907 488 aa18.96■□□□□ 0.63
RER1-202ENST00000378512 STAG3L1P0CL83 205 aa18.96■□□□□ 0.63
RER1-202ENST00000378512 LEXMQ3ZCV2 418 aa18.96■□□□□ 0.63
RER1-202ENST00000378512 TIGD5Q53EQ6 642 aa18.96■□□□□ 0.63
RER1-202ENST00000378512 MCTP1Q6DN14 999 aa18.96■□□□□ 0.63
RER1-202ENST00000378512 KSR1Q8IVT5 923 aa18.96■□□□□ 0.63
RER1-202ENST00000378512 CMTR2Q8IYT2 770 aaKnown RBP18.96■□□□□ 0.63
RER1-202ENST00000378512 TCP11Q8WWU5 503 aa18.96■□□□□ 0.63
RER1-202ENST00000378512 PRPF31Q8WWY3 499 aaKnown RBP18.96■□□□□ 0.63
RER1-202ENST00000378512 NLRP7Q8WX94 980 aa18.96■□□□□ 0.63
RER1-202ENST00000378512 SNX21Q969T3 373 aa18.96■□□□□ 0.63
RER1-202ENST00000378512 ZNF668Q96K58 619 aaPredicted RBP18.96■□□□□ 0.63
RER1-202ENST00000378512 TRAIPQ9BWF2 469 aa18.96■□□□□ 0.63
RER1-202ENST00000378512 ALG13Q9NP73 1137 aaKnown RBP18.96■□□□□ 0.63
RER1-202ENST00000378512 COL4A3BPQ9Y5P4 624 aa18.96■□□□□ 0.63
RER1-202ENST00000378512 ASAP2O43150 1006 aa18.95■□□□□ 0.62
RER1-202ENST00000378512 DNAJB1P25685 340 aa18.95■□□□□ 0.62
RER1-202ENST00000378512 GTF2F1P35269 517 aaKnown RBP eCLIP18.95■□□□□ 0.624e-7■■■■■ 31.2
RER1-202ENST00000378512 ATP2C1P98194 919 aaPredicted RBP18.95■□□□□ 0.62
RER1-202ENST00000378512 CAMK1Q14012 370 aa18.95■□□□□ 0.62
RER1-202ENST00000378512 IL17AQ16552 155 aa18.95■□□□□ 0.62
RER1-202ENST00000378512 EP400NLQ6ZTU2 488 aa18.95■□□□□ 0.62
RER1-202ENST00000378512 FERMT3Q86UX7 667 aa18.95■□□□□ 0.62
RER1-202ENST00000378512 PIGOQ8TEQ8 1089 aa18.95■□□□□ 0.62
RER1-202ENST00000378512 PSPC1Q8WXF1 523 aaKnown RBP18.95■□□□□ 0.62
RER1-202ENST00000378512 MTRQ99707 1265 aa18.95■□□□□ 0.62
RER1-202ENST00000378512 INO80BQ9C086 356 aaPredicted RBP18.95■□□□□ 0.62
RER1-202ENST00000378512 NSUN3Q9H649 340 aaKnown RBP18.95■□□□□ 0.62
RER1-202ENST00000378512 RNF216Q9NWF9 866 aaPredicted RBP18.95■□□□□ 0.62
RER1-202ENST00000378512 HCSTQ9UBK5 93 aa18.95■□□□□ 0.62
RER1-202ENST00000378512 DENND3A2RUS2 1198 aa18.94■□□□□ 0.62
RER1-202ENST00000378512 K7ELQ4 463 aaPredicted RBP18.94■□□□□ 0.62
RER1-202ENST00000378512 POU5F1BQ06416 359 aa18.94■□□□□ 0.62
RER1-202ENST00000378512 LAMTOR4Q0VGL1 99 aa18.94■□□□□ 0.62
RER1-202ENST00000378512 PTCRAQ6ISU1 281 aaPredicted RBP18.94■□□□□ 0.62
RER1-202ENST00000378512 IFNLR1Q8IU57 520 aaPredicted RBP18.94■□□□□ 0.62
RER1-202ENST00000378512 ERMNQ8TAM6 284 aa18.94■□□□□ 0.62
RER1-202ENST00000378512 TMEM143Q96AN5 459 aa18.94■□□□□ 0.62
RER1-202ENST00000378512 CHST12Q9NRB3 414 aa18.94■□□□□ 0.62
RER1-202ENST00000378512 TMEM161AQ9NX61 479 aa18.94■□□□□ 0.62
RER1-202ENST00000378512 CSDE1O75534 798 aaKnown RBP18.93■□□□□ 0.62
RER1-202ENST00000378512 ARL2P36404 184 aa18.93■□□□□ 0.62
RER1-202ENST00000378512 LTBRP36941 435 aa18.93■□□□□ 0.62
RER1-202ENST00000378512 DLX2Q07687 328 aaPredicted RBP18.93■□□□□ 0.62
RER1-202ENST00000378512 HYAL1Q12794 435 aa18.93■□□□□ 0.62
RER1-202ENST00000378512 COL19A1Q14993 1142 aa18.93■□□□□ 0.62
RER1-202ENST00000378512 ECM1Q16610 540 aa18.93■□□□□ 0.62
RER1-202ENST00000378512 HAUS3Q68CZ6 603 aa18.93■□□□□ 0.62
RER1-202ENST00000378512 NACC1Q96RE7 527 aa18.93■□□□□ 0.62
RER1-202ENST00000378512 C11orf84Q9BUA3 381 aaPredicted RBP18.93■□□□□ 0.62
RER1-202ENST00000378512 ATP6V0A4Q9HBG4 840 aa18.93■□□□□ 0.62
RER1-202ENST00000378512 LRWD1Q9UFC0 647 aa18.93■□□□□ 0.62
RER1-202ENST00000378512 STK24Q9Y6E0 443 aa18.93■□□□□ 0.62
RER1-202ENST00000378512 A0A0U1RQF3 1178 aa18.92■□□□□ 0.62
RER1-202ENST00000378512 LINC01565O15544 149 aa18.92■□□□□ 0.62
RER1-202ENST00000378512 RB1P06400 928 aa18.92■□□□□ 0.62
RER1-202ENST00000378512 PDCP20941 246 aa18.92■□□□□ 0.62
RER1-202ENST00000378512 FGFR4P22455 802 aa18.92■□□□□ 0.62
RER1-202ENST00000378512 SFPQP23246 707 aaKnown RBP eCLIP18.92■□□□□ 0.62
RER1-202ENST00000378512 MXD4Q14582 209 aaPredicted RBP18.92■□□□□ 0.62
RER1-202ENST00000378512 POTEGQ6S5H5 508 aa18.92■□□□□ 0.62
RER1-202ENST00000378512 BRAPQ7Z569 592 aa18.92■□□□□ 0.62
RER1-202ENST00000378512 SRGAP1Q7Z6B7 1085 aa18.92■□□□□ 0.62
RER1-202ENST00000378512 ZNF598Q86UK7 904 aaKnown RBP18.92■□□□□ 0.62
RER1-202ENST00000378512 FAM178BQ8IXR5 827 aa18.92■□□□□ 0.62
RER1-202ENST00000378512 PABPC5Q96DU9 382 aaKnown RBP18.92■□□□□ 0.62
RER1-202ENST00000378512 NLRP4Q96MN2 994 aa18.92■□□□□ 0.62
RER1-202ENST00000378512 SCLT1Q96NL6 688 aa18.92■□□□□ 0.62
RER1-202ENST00000378512 NFKBIZQ9BYH8 718 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms