RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 C11orf70Q9BRQ4 267 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 TMEM60Q9H2L4 133 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 CPSF2Q9P2I0 782 aaKnown RBP12.1□□□□□ -0.47
RPGR-203ENST00000378505 LCMT1Q9UIC8 334 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 PACSIN2Q9UNF0 486 aaPredicted RBP12.1□□□□□ -0.47
RPGR-203ENST00000378505 LUC7L3O95232 432 aaKnown RBP12.1□□□□□ -0.47
RPGR-203ENST00000378505 GYPCP04921 128 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 CALB1P05937 261 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 GRIN1Q05586 938 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 TMEM270Q6UE05 265 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 NYAP1Q6ZVC0 841 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 RSRC2Q7L4I2 434 aaKnown RBP12.1□□□□□ -0.47
RPGR-203ENST00000378505 ELAC2Q9BQ52 826 aaKnown RBP12.1□□□□□ -0.47
RPGR-203ENST00000378505 NGRNQ9NPE2 291 aaKnown RBP12.1□□□□□ -0.47
RPGR-203ENST00000378505 NYAP2Q9P242 653 aa12.1□□□□□ -0.47
RPGR-203ENST00000378505 CEP170BQ9Y4F5 1589 aaPredicted RBP12.09□□□□□ -0.47
RPGR-203ENST00000378505 CTIFO43310 598 aaKnown RBP12.09□□□□□ -0.47
RPGR-203ENST00000378505 GSTA1P08263 222 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 GSTA2P09210 222 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 SRGAP2BP0DMP2 458 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 MAGEA9P43362 315 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 IREB2P48200 963 aaKnown RBP12.09□□□□□ -0.47
RPGR-203ENST00000378505 SPP2Q13103 211 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 EDRF1Q3B7T1 1238 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 ZNF394Q53GI3 561 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 SNRNP48Q6IEG0 339 aaKnown RBP12.09□□□□□ -0.47
RPGR-203ENST00000378505 ZNF746Q6NUN9 644 aaPredicted RBP12.09□□□□□ -0.47
RPGR-203ENST00000378505 RSPH3Q86UC2 560 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 GSDMBQ8TAX9 411 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 GDAP1Q8TB36 358 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 NCAPGQ9BPX3 1015 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 HEMGNQ9BXL5 484 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 RGL1Q9NZL6 768 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 NOC2LQ9Y3T9 749 aaKnown RBP12.09□□□□□ -0.47
RPGR-203ENST00000378505 EMSYQ7Z589 1322 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 VGLL3A8MV65 326 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 PFDN6O15212 129 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 PDHBP11177 359 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 TBXAS1P24557 533 aaPredicted RBP12.09□□□□□ -0.47
RPGR-203ENST00000378505 MAGOHP61326 146 aaKnown RBP12.09□□□□□ -0.47
RPGR-203ENST00000378505 LDHDQ86WU2 507 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.09□□□□□ -0.47
RPGR-203ENST00000378505 NUP85Q9BW27 656 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 SAYSD1Q9NPB0 183 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 GABBR1Q9UBS5 961 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 ESYT2A0FGR8 921 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 ABL1P00519 1130 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 RCN2Q14257 317 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 PRR5LQ6MZQ0 368 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 MARCH10Q8NA82 808 aaPredicted RBP12.09□□□□□ -0.47
RPGR-203ENST00000378505 FAM193BQ96PV7 902 aaPredicted RBP12.09□□□□□ -0.47
RPGR-203ENST00000378505 FUCA2Q9BTY2 467 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 AP5M1Q9H0R1 490 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 WNT8AQ9H1J5 351 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 IPO11Q9UI26 975 aaKnown RBP12.09□□□□□ -0.47
RPGR-203ENST00000378505 COL3A1P02461 1466 aaPredicted RBP12.09□□□□□ -0.47
RPGR-203ENST00000378505 IQANK1A0A1B0GTG1 560 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 SLC16A3O15427 465 aaKnown RBP12.09□□□□□ -0.47
RPGR-203ENST00000378505 MARK3P27448 753 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 CNGA1P29973 690 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 PMS2P54278 862 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 ARL4CP56559 192 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 NR1H3Q13133 447 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 E2F5Q15329 346 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 FBXL13Q8NEE6 735 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 VIPAS39Q9H9C1 493 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 PIM2Q9P1W9 311 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 ZHX2Q9Y6X8 837 aa12.09□□□□□ -0.47
RPGR-203ENST00000378505 NDUFB10O96000 172 aa12.08□□□□□ -0.48
RPGR-203ENST00000378505 NMT1P30419 496 aaKnown RBP12.08□□□□□ -0.48
RPGR-203ENST00000378505 SPARCL1Q14515 664 aa12.08□□□□□ -0.48
RPGR-203ENST00000378505 DBN1Q16643 649 aa12.08□□□□□ -0.48
RPGR-203ENST00000378505 SH2D4BQ5SQS7 431 aa12.08□□□□□ -0.48
RPGR-203ENST00000378505 RAPH1Q70E73 1250 aa12.08□□□□□ -0.48
RPGR-203ENST00000378505 BZW1Q7L1Q6 419 aaKnown RBP12.08□□□□□ -0.48
RPGR-203ENST00000378505 ARMCX2Q7L311 632 aa12.08□□□□□ -0.48
RPGR-203ENST00000378505 TADA2BQ86TJ2 420 aa12.08□□□□□ -0.48
RPGR-203ENST00000378505 PDCD7Q8N8D1 485 aaKnown RBP12.08□□□□□ -0.48
RPGR-203ENST00000378505 PSPC1Q8WXF1 523 aaKnown RBP12.08□□□□□ -0.48
RPGR-203ENST00000378505 LRRC1Q9BTT6 524 aa12.08□□□□□ -0.48
RPGR-203ENST00000378505 PITPNM3Q9BZ71 974 aa12.08□□□□□ -0.48
RPGR-203ENST00000378505 STRIP2Q9ULQ0 834 aa12.08□□□□□ -0.48
RPGR-203ENST00000378505 AFF2P51816 1311 aa12.08□□□□□ -0.48
RPGR-203ENST00000378505 PPP2R2AP63151 447 aa12.08□□□□□ -0.48
RPGR-203ENST00000378505 MIPOL1Q8TD10 442 aa12.08□□□□□ -0.48
RPGR-203ENST00000378505 Q9H521 79 aa12.08□□□□□ -0.48
RPGR-203ENST00000378505 ZWILCHQ9H900 591 aa12.08□□□□□ -0.48
RPGR-203ENST00000378505 HPSEQ9Y251 543 aa12.08□□□□□ -0.48
RPGR-203ENST00000378505 GMNCA6NCL1 334 aa12.08□□□□□ -0.48
RPGR-203ENST00000378505 PPP1R3GB7ZBB8 358 aa12.08□□□□□ -0.48
RPGR-203ENST00000378505 KRT37O76014 449 aa12.08□□□□□ -0.48
RPGR-203ENST00000378505 ITPK1Q13572 414 aa12.08□□□□□ -0.48
RPGR-203ENST00000378505 STRIP1Q5VSL9 837 aa12.08□□□□□ -0.48
RPGR-203ENST00000378505 SWSAP1Q6NVH7 229 aa12.08□□□□□ -0.48
RPGR-203ENST00000378505 TRIM72Q6ZMU5 477 aa12.08□□□□□ -0.48
RPGR-203ENST00000378505 PCGF5Q86SE9 256 aa12.08□□□□□ -0.48
RPGR-203ENST00000378505 PLCD3Q8N3E9 789 aa12.08□□□□□ -0.48
RPGR-203ENST00000378505 ATP6V1G3Q96LB4 118 aa12.08□□□□□ -0.48
RPGR-203ENST00000378505 AGXT2Q9BYV1 514 aa12.08□□□□□ -0.48
RPGR-203ENST00000378505 GINM1Q9NU53 330 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms