RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 HNRNPCL1O60812 293 aaKnown RBP15.49■□□□□ 0.07
PRDM16-203ENST00000378391 TOM1L1O75674 476 aa15.49■□□□□ 0.07
PRDM16-203ENST00000378391 CD44P16070 742 aaKnown RBP15.49■□□□□ 0.07
PRDM16-203ENST00000378391 SLC20A2Q08357 652 aa15.49■□□□□ 0.07
PRDM16-203ENST00000378391 SYDE2Q5VT97 1194 aa15.49■□□□□ 0.07
PRDM16-203ENST00000378391 NFRKBQ6P4R8 1299 aa15.49■□□□□ 0.07
PRDM16-203ENST00000378391 TLK2Q86UE8 772 aa15.49■□□□□ 0.07
PRDM16-203ENST00000378391 DNAAF3Q8N9W5 541 aa15.49■□□□□ 0.07
PRDM16-203ENST00000378391 FAM149B1Q96BN6 582 aa15.49■□□□□ 0.07
PRDM16-203ENST00000378391 TAF1DQ9H5J8 278 aaPredicted RBP15.49■□□□□ 0.07
PRDM16-203ENST00000378391 MON2Q7Z3U7 1717 aa15.49■□□□□ 0.07
PRDM16-203ENST00000378391 PSMD14O00487 310 aa15.49■□□□□ 0.07
PRDM16-203ENST00000378391 PLS3P13797 630 aa15.49■□□□□ 0.07
PRDM16-203ENST00000378391 CDK8P49336 464 aa15.49■□□□□ 0.07
PRDM16-203ENST00000378391 MPP4Q96JB8 637 aa15.49■□□□□ 0.07
PRDM16-203ENST00000378391 C3P01024 1663 aa15.49■□□□□ 0.07
PRDM16-203ENST00000378391 WDR91A4D1P6 747 aa15.49■□□□□ 0.07
PRDM16-203ENST00000378391 PPP1R3GB7ZBB8 358 aa15.49■□□□□ 0.07
PRDM16-203ENST00000378391 TJP3O95049 919 aa15.49■□□□□ 0.07
PRDM16-203ENST00000378391 STAT2P52630 851 aa15.49■□□□□ 0.07
PRDM16-203ENST00000378391 GRM1Q13255 1194 aa15.49■□□□□ 0.07
PRDM16-203ENST00000378391 CCNI2Q6ZMN8 369 aaPredicted RBP15.49■□□□□ 0.07
PRDM16-203ENST00000378391 PAGR1Q9BTK6 254 aa15.49■□□□□ 0.07
PRDM16-203ENST00000378391 SLC5A4Q9NY91 659 aa15.49■□□□□ 0.07
PRDM16-203ENST00000378391 GSG1L2A8MUP6 293 aa15.49■□□□□ 0.07
PRDM16-203ENST00000378391 SURF1Q15526 300 aa15.49■□□□□ 0.07
PRDM16-203ENST00000378391 CC2D2BQ6DHV5 1058 aa15.49■□□□□ 0.07
PRDM16-203ENST00000378391 C16orf87Q6PH81 154 aa15.49■□□□□ 0.07
PRDM16-203ENST00000378391 CCNYQ8ND76 341 aa15.49■□□□□ 0.07
PRDM16-203ENST00000378391 ATP6V1G3Q96LB4 118 aa15.49■□□□□ 0.07
PRDM16-203ENST00000378391 GPC5P78333 572 aa15.48■□□□□ 0.07
PRDM16-203ENST00000378391 KRT80Q6KB66 452 aa15.48■□□□□ 0.07
PRDM16-203ENST00000378391 FBXL16Q8N461 479 aa15.48■□□□□ 0.07
PRDM16-203ENST00000378391 CNKSR1Q969H4 720 aa15.48■□□□□ 0.07
PRDM16-203ENST00000378391 TMEM60Q9H2L4 133 aa15.48■□□□□ 0.07
PRDM16-203ENST00000378391 CACYBPQ9HB71 228 aaKnown RBP15.48■□□□□ 0.07
PRDM16-203ENST00000378391 STOML1Q9UBI4 398 aa15.48■□□□□ 0.07
PRDM16-203ENST00000378391 ANGPTL3Q9Y5C1 460 aa15.48■□□□□ 0.07
PRDM16-203ENST00000378391 WDR17Q8IZU2 1322 aa15.48■□□□□ 0.07
PRDM16-203ENST00000378391 PALM3A6NDB9 673 aaPredicted RBP15.48■□□□□ 0.07
PRDM16-203ENST00000378391 GUF1Q8N442 669 aaKnown RBP15.48■□□□□ 0.07
PRDM16-203ENST00000378391 PAWRQ96IZ0 340 aaKnown RBP15.48■□□□□ 0.07
PRDM16-203ENST00000378391 LRRC1Q9BTT6 524 aa15.48■□□□□ 0.07
PRDM16-203ENST00000378391 RAB21Q9UL25 225 aa15.48■□□□□ 0.07
PRDM16-203ENST00000378391 TFR2Q9UP52 801 aa15.48■□□□□ 0.07
PRDM16-203ENST00000378391 RASA4BC9J798 803 aa15.48■□□□□ 0.07
PRDM16-203ENST00000378391 INO80B-WBP1J3KQ70 363 aa15.48■□□□□ 0.07
PRDM16-203ENST00000378391 RASA4O43374 803 aa15.48■□□□□ 0.07
PRDM16-203ENST00000378391 EEF1DP29692 281 aaKnown RBP15.48■□□□□ 0.07
PRDM16-203ENST00000378391 GFPT1Q06210 699 aaPredicted RBP15.48■□□□□ 0.07
PRDM16-203ENST00000378391 KCNH2Q12809 1159 aa15.48■□□□□ 0.07
PRDM16-203ENST00000378391 TBC1D9BQ66K14 1250 aa15.48■□□□□ 0.07
PRDM16-203ENST00000378391 NLRP14Q86W24 1093 aa15.48■□□□□ 0.07
PRDM16-203ENST00000378391 ST13P4Q8IZP2 240 aaPredicted RBP15.48■□□□□ 0.07
PRDM16-203ENST00000378391 INO80BQ9C086 356 aaPredicted RBP15.48■□□□□ 0.07
PRDM16-203ENST00000378391 SLITRK6Q9H5Y7 841 aa15.48■□□□□ 0.07
PRDM16-203ENST00000378391 BSDC1Q9NW68 430 aaPredicted RBP15.48■□□□□ 0.07
PRDM16-203ENST00000378391 PI4KBQ9UBF8 816 aa15.48■□□□□ 0.07
PRDM16-203ENST00000378391 MAP2K7O14733 419 aa15.48■□□□□ 0.07
PRDM16-203ENST00000378391 PRPSAP2O60256 369 aa15.48■□□□□ 0.07
PRDM16-203ENST00000378391 OATP04181 439 aa15.48■□□□□ 0.07
PRDM16-203ENST00000378391 TOB1P50616 345 aaPredicted RBP15.48■□□□□ 0.07
PRDM16-203ENST00000378391 ATP2C1P98194 919 aaPredicted RBP15.48■□□□□ 0.07
PRDM16-203ENST00000378391 ERFEQ4G0M1 354 aa15.48■□□□□ 0.07
PRDM16-203ENST00000378391 MIS18BP1Q6P0N0 1132 aa15.48■□□□□ 0.07
PRDM16-203ENST00000378391 WDR93Q6P2C0 686 aa15.48■□□□□ 0.07
PRDM16-203ENST00000378391 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.48■□□□□ 0.07
PRDM16-203ENST00000378391 NCK2O43639 380 aa15.47■□□□□ 0.07
PRDM16-203ENST00000378391 TFAMQ00059 246 aaKnown RBP15.47■□□□□ 0.07
PRDM16-203ENST00000378391 SLC44A4Q53GD3 710 aa15.47■□□□□ 0.07
PRDM16-203ENST00000378391 FOXR1Q6PIV2 292 aa15.47■□□□□ 0.07
PRDM16-203ENST00000378391 CRLF3Q8IUI8 442 aa15.47■□□□□ 0.07
PRDM16-203ENST00000378391 ENAHQ8N8S7 591 aaPredicted RBP15.47■□□□□ 0.07
PRDM16-203ENST00000378391 RBM41Q96IZ5 413 aaKnown RBP15.47■□□□□ 0.07
PRDM16-203ENST00000378391 INTS13Q9NVM9 706 aa15.47■□□□□ 0.07
PRDM16-203ENST00000378391 SYNJ2BP-COX16A0A087WUM0 186 aa15.47■□□□□ 0.07
PRDM16-203ENST00000378391 POTEB3A0JP26 581 aa15.47■□□□□ 0.07
PRDM16-203ENST00000378391 FAM187AA6NFU0 413 aa15.47■□□□□ 0.07
PRDM16-203ENST00000378391 ZNF233A6NK53 670 aa15.47■□□□□ 0.07
PRDM16-203ENST00000378391 GYG2O15488 501 aa15.47■□□□□ 0.07
PRDM16-203ENST00000378391 SORBS3O60504 671 aa15.47■□□□□ 0.07
PRDM16-203ENST00000378391 PMS2P54278 862 aa15.47■□□□□ 0.07
PRDM16-203ENST00000378391 POTEBQ6S5H4 581 aa15.47■□□□□ 0.07
PRDM16-203ENST00000378391 MAML1Q92585 1016 aa15.47■□□□□ 0.07
PRDM16-203ENST00000378391 TTC25Q96NG3 672 aa15.47■□□□□ 0.07
PRDM16-203ENST00000378391 COX16Q9P0S2 106 aa15.47■□□□□ 0.07
PRDM16-203ENST00000378391 ART3Q13508 389 aa15.47■□□□□ 0.07
PRDM16-203ENST00000378391 FBXW10Q5XX13 1052 aa15.47■□□□□ 0.07
PRDM16-203ENST00000378391 MCUQ8NE86 351 aa15.47■□□□□ 0.07
PRDM16-203ENST00000378391 SAYSD1Q9NPB0 183 aa15.47■□□□□ 0.07
PRDM16-203ENST00000378391 ARL4CP56559 192 aa15.47■□□□□ 0.07
PRDM16-203ENST00000378391 NLGN1Q8N2Q7 840 aa15.47■□□□□ 0.07
PRDM16-203ENST00000378391 GINM1Q9NU53 330 aa15.47■□□□□ 0.07
PRDM16-203ENST00000378391 DDX28Q9NUL7 540 aaKnown RBP15.47■□□□□ 0.07
PRDM16-203ENST00000378391 DNAJC17Q9NVM6 304 aaKnown RBP15.47■□□□□ 0.07
PRDM16-203ENST00000378391 GEMIN8Q9NWZ8 242 aaKnown RBP15.47■□□□□ 0.07
PRDM16-203ENST00000378391 EIF3HO15372 352 aaKnown RBP eCLIP15.46■□□□□ 0.078e-6■□□□□ 10.6
PRDM16-203ENST00000378391 NR3C1P04150 777 aa15.46■□□□□ 0.07
PRDM16-203ENST00000378391 CHRNA3P32297 505 aa15.46■□□□□ 0.07
PRDM16-203ENST00000378391 TTC13Q8NBP0 860 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms