RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 TATDN1Q6P1N9 297 aa15.01□□□□□ -0.01
SF1-205ENST00000377394 PNMA8AQ86V59 439 aaPredicted RBP15.01□□□□□ -0.01
SF1-205ENST00000377394 FBXO11Q86XK2 927 aa15.01□□□□□ -0.01
SF1-205ENST00000377394 METTL13Q8N6R0 699 aa15.01□□□□□ -0.01
SF1-205ENST00000377394 OLIG1Q8TAK6 271 aa15.01□□□□□ -0.01
SF1-205ENST00000377394 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.01□□□□□ -0.012e-6■■■■□ 19.4
SF1-205ENST00000377394 POLR3CQ9BUI4 534 aaPredicted RBP15.01□□□□□ -0.01
SF1-205ENST00000377394 LRRC4CQ9HCJ2 640 aa15.01□□□□□ -0.01
SF1-205ENST00000377394 UPP2O95045 317 aa15.01□□□□□ -0.01
SF1-205ENST00000377394 GCNT3O95395 438 aa15.01□□□□□ -0.01
SF1-205ENST00000377394 ANP32DO95626 131 aa15.01□□□□□ -0.01
SF1-205ENST00000377394 EYA4O95677 639 aa15.01□□□□□ -0.01
SF1-205ENST00000377394 RPL13P26373 211 aaKnown RBP15.01□□□□□ -0.01
SF1-205ENST00000377394 ICA1Q05084 483 aa15.01□□□□□ -0.01
SF1-205ENST00000377394 NBPF20Q3BBV1 942 aa15.01□□□□□ -0.01
SF1-205ENST00000377394 LACTB2Q53H82 288 aaPredicted RBP15.01□□□□□ -0.01
SF1-205ENST00000377394 ODF2Q5BJF6 829 aa15.01□□□□□ -0.01
SF1-205ENST00000377394 TCERG1LQ5VWI1 586 aa15.01□□□□□ -0.01
SF1-205ENST00000377394 EIF2AK1Q9BQI3 630 aaKnown RBP15.01□□□□□ -0.01
SF1-205ENST00000377394 SPATS2LQ9NUQ6 558 aaKnown RBP15.01□□□□□ -0.01
SF1-205ENST00000377394 GCNT4Q9P109 453 aa15.01□□□□□ -0.01
SF1-205ENST00000377394 PI4KBQ9UBF8 816 aa15.01□□□□□ -0.01
SF1-205ENST00000377394 A0A0A6YYK5 440 aaPredicted RBP15□□□□□ -0.01
SF1-205ENST00000377394 GTPBP10A4D1E9 387 aaKnown RBP15□□□□□ -0.01
SF1-205ENST00000377394 GMCL1P1Q8NEA9 526 aa15□□□□□ -0.01
SF1-205ENST00000377394 MICAL1Q8TDZ2 1067 aa15□□□□□ -0.01
SF1-205ENST00000377394 HOOK2Q96ED9 719 aa15□□□□□ -0.01
SF1-205ENST00000377394 GMCL1Q96IK5 515 aa15□□□□□ -0.01
SF1-205ENST00000377394 GJD4Q96KN9 370 aaPredicted RBP15□□□□□ -0.01
SF1-205ENST00000377394 IKZF4Q9H2S9 585 aa15□□□□□ -0.01
SF1-205ENST00000377394 OLFML3Q9NRN5 406 aa15□□□□□ -0.01
SF1-205ENST00000377394 RGL1Q9NZL6 768 aa15□□□□□ -0.01
SF1-205ENST00000377394 ZMYM2Q9UBW7 1377 aa15□□□□□ -0.01
SF1-205ENST00000377394 ANKRD31Q8N7Z5 1873 aa15□□□□□ -0.01
SF1-205ENST00000377394 GOLGA6L10A6NI86 522 aa15□□□□□ -0.01
SF1-205ENST00000377394 GCOM1H8Y6P7 765 aaPredicted RBP15□□□□□ -0.01
SF1-205ENST00000377394 NDUFB10O96000 172 aa15□□□□□ -0.01
SF1-205ENST00000377394 MYZAPP0CAP1 466 aa15□□□□□ -0.01
SF1-205ENST00000377394 HOXA13P31271 388 aaPredicted RBP15□□□□□ -0.01
SF1-205ENST00000377394 HSD17B3P37058 310 aa15□□□□□ -0.01
SF1-205ENST00000377394 IFFO1Q0D2I5 559 aa15□□□□□ -0.01
SF1-205ENST00000377394 SNX1Q13596 522 aa15□□□□□ -0.01
SF1-205ENST00000377394 UAP1Q16222 522 aaPredicted RBP15□□□□□ -0.01
SF1-205ENST00000377394 SYDE2Q5VT97 1194 aa15□□□□□ -0.01
SF1-205ENST00000377394 AP1ARQ63HQ0 302 aa15□□□□□ -0.01
SF1-205ENST00000377394 RINT1Q6NUQ1 792 aa15□□□□□ -0.01
SF1-205ENST00000377394 DDX42Q86XP3 938 aaKnown RBP eCLIP15□□□□□ -0.01
SF1-205ENST00000377394 BUD13Q9BRD0 619 aaKnown RBP eCLIP15□□□□□ -0.013e-7■■■□□ 15.6
SF1-205ENST00000377394 AP1M1Q9BXS5 423 aa15□□□□□ -0.01
SF1-205ENST00000377394 TRPC6Q9Y210 931 aa15□□□□□ -0.01
SF1-205ENST00000377394 NOC2LQ9Y3T9 749 aaKnown RBP15□□□□□ -0.01
SF1-205ENST00000377394 PCDHB13Q9Y5F0 798 aa15□□□□□ -0.01
SF1-205ENST00000377394 SFI1A8K8P3 1242 aa14.99□□□□□ -0.01
SF1-205ENST00000377394 PGRMC1O00264 195 aaKnown RBP14.99□□□□□ -0.01
SF1-205ENST00000377394 PPIP5K2O43314 1243 aa14.99□□□□□ -0.01
SF1-205ENST00000377394 TBCAO75347 108 aaKnown RBP14.99□□□□□ -0.01
SF1-205ENST00000377394 H2AFZP0C0S5 128 aa14.99□□□□□ -0.01
SF1-205ENST00000377394 CUL1Q13616 776 aa14.99□□□□□ -0.01
SF1-205ENST00000377394 HLTFQ14527 1009 aaKnown RBP eCLIP14.99□□□□□ -0.01
SF1-205ENST00000377394 H2AFVQ71UI9 128 aa14.99□□□□□ -0.01
SF1-205ENST00000377394 CPLX4Q7Z7G2 160 aa14.99□□□□□ -0.01
SF1-205ENST00000377394 RASGEF1CQ8N431 466 aa14.99□□□□□ -0.01
SF1-205ENST00000377394 SPDYE1Q8NFV5 336 aaPredicted RBP14.99□□□□□ -0.01
SF1-205ENST00000377394 MDM1Q8TC05 714 aa14.99□□□□□ -0.01
SF1-205ENST00000377394 ZNF570Q96NI8 536 aa14.99□□□□□ -0.01
SF1-205ENST00000377394 IDI2Q9BXS1 227 aa14.99□□□□□ -0.01
SF1-205ENST00000377394 EBF2Q9HAK2 575 aa14.99□□□□□ -0.01
SF1-205ENST00000377394 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.99□□□□□ -0.01
SF1-205ENST00000377394 SUCLA2Q9P2R7 463 aaPredicted RBP14.99□□□□□ -0.01
SF1-205ENST00000377394 INTUQ9ULD6 942 aa14.99□□□□□ -0.01
SF1-205ENST00000377394 RABGAP1Q9Y3P9 1069 aa14.99□□□□□ -0.01
SF1-205ENST00000377394 NRXN2Q9P2S2 1712 aa14.99□□□□□ -0.01
SF1-205ENST00000377394 SART1O43290 800 aaKnown RBP14.99□□□□□ -0.01
SF1-205ENST00000377394 DNAJC8O75937 253 aaPredicted RBP14.99□□□□□ -0.01
SF1-205ENST00000377394 CYP3A4P08684 503 aa14.99□□□□□ -0.01
SF1-205ENST00000377394 ADCY2Q08462 1091 aa14.99□□□□□ -0.01
SF1-205ENST00000377394 TMEM179Q6ZVK1 233 aa14.99□□□□□ -0.01
SF1-205ENST00000377394 TBC1D1Q86TI0 1168 aaPredicted RBP14.99□□□□□ -0.01
SF1-205ENST00000377394 SLC30A5Q8TAD4 765 aa14.99□□□□□ -0.01
SF1-205ENST00000377394 NEUROG2Q9H2A3 272 aa14.99□□□□□ -0.01
SF1-205ENST00000377394 C15orf41Q9Y2V0 281 aa14.99□□□□□ -0.01
SF1-205ENST00000377394 IGLV3-22A0A075B6J6 115 aa14.99□□□□□ -0.01
SF1-205ENST00000377394 SRRM3A6NNA2 597 aaPredicted RBP14.99□□□□□ -0.01
SF1-205ENST00000377394 H0YGN5 161 aa14.99□□□□□ -0.01
SF1-205ENST00000377394 GDF11O95390 407 aa14.99□□□□□ -0.01
SF1-205ENST00000377394 JAG1P78504 1218 aa14.99□□□□□ -0.01
SF1-205ENST00000377394 ZNF844Q08AG5 666 aa14.99□□□□□ -0.01
SF1-205ENST00000377394 THEMIS2Q5TEJ8 643 aa14.99□□□□□ -0.01
SF1-205ENST00000377394 PEX26Q7Z412 305 aa14.99□□□□□ -0.01
SF1-205ENST00000377394 NT5DC3Q86UY8 548 aa14.99□□□□□ -0.01
SF1-205ENST00000377394 ARFGAP2Q8N6H7 521 aa14.99□□□□□ -0.01
SF1-205ENST00000377394 LNX1Q8TBB1 728 aaPredicted RBP14.99□□□□□ -0.01
SF1-205ENST00000377394 HSD17B14Q9BPX1 270 aa14.99□□□□□ -0.01
SF1-205ENST00000377394 DDX47Q9H0S4 455 aaKnown RBP14.99□□□□□ -0.01
SF1-205ENST00000377394 NOVA2Q9UNW9 492 aaKnown RBP14.99□□□□□ -0.01
SF1-205ENST00000377394 NFS1Q9Y697 457 aa14.99□□□□□ -0.01
SF1-205ENST00000377394 C5orf60A6NFR6 353 aa14.98□□□□□ -0.01
SF1-205ENST00000377394 GFPT2O94808 682 aa14.98□□□□□ -0.01
SF1-205ENST00000377394 ITGA4P13612 1032 aa14.98□□□□□ -0.01
SF1-205ENST00000377394 FERP16591 822 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms