RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 THAP2Q9H0W7 228 aa17.85■□□□□ 0.45
TRIM39-201ENST00000376656 PNMA6FA0A0J9YX94 578 aa17.84■□□□□ 0.45
TRIM39-201ENST00000376656 RSPH10B2B2RC85 870 aa17.84■□□□□ 0.45
TRIM39-201ENST00000376656 PDXKO00764 312 aa17.84■□□□□ 0.45
TRIM39-201ENST00000376656 OAS1P00973 400 aaKnown RBP17.84■□□□□ 0.45
TRIM39-201ENST00000376656 RSPH10BP0C881 870 aa17.84■□□□□ 0.45
TRIM39-201ENST00000376656 SOX5P35711 763 aa17.84■□□□□ 0.45
TRIM39-201ENST00000376656 DRG2P55039 364 aaKnown RBP17.84■□□□□ 0.45
TRIM39-201ENST00000376656 ASPRV1Q53RT3 343 aa17.84■□□□□ 0.45
TRIM39-201ENST00000376656 BARGINQ6ZT62 677 aa17.84■□□□□ 0.45
TRIM39-201ENST00000376656 BZW1Q7L1Q6 419 aaKnown RBP17.84■□□□□ 0.45
TRIM39-201ENST00000376656 PALB2Q86YC2 1186 aa17.84■□□□□ 0.45
TRIM39-201ENST00000376656 CNOT7Q9UIV1 285 aaKnown RBP17.84■□□□□ 0.45
TRIM39-201ENST00000376656 RASAL2Q9UJF2 1139 aa17.84■□□□□ 0.45
TRIM39-201ENST00000376656 DIAPH2O60879 1101 aa17.84■□□□□ 0.45
TRIM39-201ENST00000376656 LMNB1P20700 586 aa17.84■□□□□ 0.45
TRIM39-201ENST00000376656 LRCH2Q5VUJ6 765 aa17.84■□□□□ 0.45
TRIM39-201ENST00000376656 ZDHHC14Q8IZN3 488 aa17.84■□□□□ 0.45
TRIM39-201ENST00000376656 SPICE1Q8N0Z3 855 aa17.84■□□□□ 0.45
TRIM39-201ENST00000376656 FGFR1OP2Q9NVK5 253 aa17.84■□□□□ 0.45
TRIM39-201ENST00000376656 NOP53Q9NZM5 478 aaKnown RBP17.84■□□□□ 0.45
TRIM39-201ENST00000376656 RASGRF2O14827 1237 aa17.83■□□□□ 0.45
TRIM39-201ENST00000376656 RIPK2O43353 540 aa17.83■□□□□ 0.45
TRIM39-201ENST00000376656 SLC16A2P36021 539 aa17.83■□□□□ 0.45
TRIM39-201ENST00000376656 SATB1Q01826 763 aa17.83■□□□□ 0.45
TRIM39-201ENST00000376656 TTC27Q6P3X3 843 aa17.83■□□□□ 0.45
TRIM39-201ENST00000376656 CATSPER3Q86XQ3 398 aa17.83■□□□□ 0.45
TRIM39-201ENST00000376656 PRELID2Q8N945 189 aa17.83■□□□□ 0.45
TRIM39-201ENST00000376656 MTMR4Q9NYA4 1195 aa17.83■□□□□ 0.45
TRIM39-201ENST00000376656 PHF2O75151 1096 aa17.83■□□□□ 0.44
TRIM39-201ENST00000376656 LDHCP07864 332 aa17.83■□□□□ 0.44
TRIM39-201ENST00000376656 PLCG2P16885 1265 aa17.83■□□□□ 0.44
TRIM39-201ENST00000376656 MARCKSL1P49006 195 aa17.83■□□□□ 0.44
TRIM39-201ENST00000376656 PDE6CP51160 858 aa17.83■□□□□ 0.44
TRIM39-201ENST00000376656 CCNHP51946 323 aaPredicted RBP17.83■□□□□ 0.44
TRIM39-201ENST00000376656 DRAP1Q14919 205 aaPredicted RBP17.83■□□□□ 0.44
TRIM39-201ENST00000376656 GALNTL6Q49A17 601 aa17.83■□□□□ 0.44
TRIM39-201ENST00000376656 TNFAIP8L3Q5GJ75 292 aa17.83■□□□□ 0.44
TRIM39-201ENST00000376656 EXOC3L1Q86VI1 746 aa17.83■□□□□ 0.44
TRIM39-201ENST00000376656 METTL14Q9HCE5 456 aaKnown RBP17.83■□□□□ 0.44
TRIM39-201ENST00000376656 SEPT11Q9NVA2 429 aaKnown RBP17.83■□□□□ 0.44
TRIM39-201ENST00000376656 USP15Q9Y4E8 981 aaPredicted RBP17.83■□□□□ 0.44
TRIM39-201ENST00000376656 NHSQ6T4R5 1651 aa17.83■□□□□ 0.44
TRIM39-201ENST00000376656 TCP11X1B4DZS4 312 aa17.83■□□□□ 0.44
TRIM39-201ENST00000376656 USP17L15C9J2P7 530 aa17.83■□□□□ 0.44
TRIM39-201ENST00000376656 USP17L13C9JLJ4 530 aa17.83■□□□□ 0.44
TRIM39-201ENST00000376656 USP17L11C9JVI0 530 aa17.83■□□□□ 0.44
TRIM39-201ENST00000376656 USP17L18D6R9N7 530 aa17.83■□□□□ 0.44
TRIM39-201ENST00000376656 USP17L22D6RA61 530 aa17.83■□□□□ 0.44
TRIM39-201ENST00000376656 USP17L17D6RBQ6 530 aa17.83■□□□□ 0.44
TRIM39-201ENST00000376656 USP17L19D6RCP7 530 aa17.83■□□□□ 0.44
TRIM39-201ENST00000376656 USP17L20D6RJB6 530 aa17.83■□□□□ 0.44
TRIM39-201ENST00000376656 PPP1R12AO14974 1030 aaPredicted RBP17.83■□□□□ 0.44
TRIM39-201ENST00000376656 KRT16P08779 473 aa17.83■□□□□ 0.44
TRIM39-201ENST00000376656 USP17L24Q0WX57 530 aa17.83■□□□□ 0.44
TRIM39-201ENST00000376656 USP17L6PQ6QN14 398 aa17.83■□□□□ 0.44
TRIM39-201ENST00000376656 OTUD6AQ7L8S5 288 aa17.83■□□□□ 0.44
TRIM39-201ENST00000376656 KRT35Q92764 455 aa17.83■□□□□ 0.44
TRIM39-201ENST00000376656 PSTPIP2Q9H939 334 aa17.83■□□□□ 0.44
TRIM39-201ENST00000376656 TYW1Q9NV66 732 aaKnown RBP17.83■□□□□ 0.44
TRIM39-201ENST00000376656 DNAJC12Q9UKB3 198 aa17.83■□□□□ 0.44
TRIM39-201ENST00000376656 ANKRD63C9JTQ0 380 aa17.82■□□□□ 0.44
TRIM39-201ENST00000376656 CREB1P16220 341 aa17.82■□□□□ 0.44
TRIM39-201ENST00000376656 KCNQ4P56696 695 aa17.82■□□□□ 0.44
TRIM39-201ENST00000376656 PPP1R18Q6NYC8 613 aa17.82■□□□□ 0.44
TRIM39-201ENST00000376656 DYDC1Q8WWB3 177 aa17.82■□□□□ 0.44
TRIM39-201ENST00000376656 SYT11Q9BT88 431 aa17.82■□□□□ 0.44
TRIM39-201ENST00000376656 ANKIB1Q9P2G1 1089 aa17.82■□□□□ 0.44
TRIM39-201ENST00000376656 PNMA3Q9UL41 463 aa17.82■□□□□ 0.44
TRIM39-201ENST00000376656 PCDHA3Q9Y5H8 950 aa17.82■□□□□ 0.44
TRIM39-201ENST00000376656 TMEM109Q9BVC6 243 aa17.82■□□□□ 0.44
TRIM39-201ENST00000376656 MLXIPLQ9NP71 852 aa17.82■□□□□ 0.44
TRIM39-201ENST00000376656 BATF3Q9NR55 127 aa17.82■□□□□ 0.44
TRIM39-201ENST00000376656 SNHG28P0DPA3 235 aa17.82■□□□□ 0.44
TRIM39-201ENST00000376656 BTNL9Q6UXG8 535 aa17.82■□□□□ 0.44
TRIM39-201ENST00000376656 ERICH1Q86X53 443 aa17.82■□□□□ 0.44
TRIM39-201ENST00000376656 KLHL29Q96CT2 875 aa17.82■□□□□ 0.44
TRIM39-201ENST00000376656 GPR88Q9GZN0 384 aa17.82■□□□□ 0.44
TRIM39-201ENST00000376656 MTRF1LQ9UGC7 380 aaKnown RBP17.82■□□□□ 0.44
TRIM39-201ENST00000376656 TRIM33Q9UPN9 1127 aa17.82■□□□□ 0.44
TRIM39-201ENST00000376656 STK38LQ9Y2H1 464 aa17.82■□□□□ 0.44
TRIM39-201ENST00000376656 ALG6Q9Y672 507 aa17.82■□□□□ 0.44
TRIM39-201ENST00000376656 SLC16A3O15427 465 aaKnown RBP17.81■□□□□ 0.44
TRIM39-201ENST00000376656 GCNT3O95395 438 aa17.81■□□□□ 0.44
TRIM39-201ENST00000376656 CCDC25Q86WR0 208 aa17.81■□□□□ 0.44
TRIM39-201ENST00000376656 SPDL1Q96EA4 605 aa17.81■□□□□ 0.44
TRIM39-201ENST00000376656 ATF5Q9Y2D1 282 aaPredicted RBP17.81■□□□□ 0.44
TRIM39-201ENST00000376656 USP17L10C9JJH3 530 aa17.81■□□□□ 0.44
TRIM39-201ENST00000376656 RPL13P26373 211 aaKnown RBP17.81■□□□□ 0.44
TRIM39-201ENST00000376656 COPS2P61201 443 aa17.81■□□□□ 0.44
TRIM39-201ENST00000376656 BNIP1Q12981 228 aa17.81■□□□□ 0.44
TRIM39-201ENST00000376656 LONRF1Q17RB8 773 aa17.81■□□□□ 0.44
TRIM39-201ENST00000376656 BORCS6Q96GS4 357 aa17.81■□□□□ 0.44
TRIM39-201ENST00000376656 MXD3Q9BW11 206 aa17.81■□□□□ 0.44
TRIM39-201ENST00000376656 STK33Q9BYT3 514 aa17.81■□□□□ 0.44
TRIM39-201ENST00000376656 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.81■□□□□ 0.44
TRIM39-201ENST00000376656 SBF2Q86WG5 1849 aa17.81■□□□□ 0.44
TRIM39-201ENST00000376656 GTPBP10A4D1E9 387 aaKnown RBP17.8■□□□□ 0.44
TRIM39-201ENST00000376656 TMEM110-MUSTN1A8MSY1 372 aa17.8■□□□□ 0.44
TRIM39-201ENST00000376656 FOXO6A8MYZ6 492 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms