RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 TXNP10599 105 aaKnown RBP19.35■□□□□ 0.69
CTTN-203ENST00000376561 SNRPFP62306 86 aaKnown RBP19.35■□□□□ 0.69
CTTN-203ENST00000376561 SYT10Q6XYQ8 523 aa19.35■□□□□ 0.69
CTTN-203ENST00000376561 RRAGAQ7L523 313 aa19.35■□□□□ 0.69
CTTN-203ENST00000376561 MAP4K3Q8IVH8 894 aa19.35■□□□□ 0.69
CTTN-203ENST00000376561 DHX37Q8IY37 1157 aaKnown RBP19.35■□□□□ 0.69
CTTN-203ENST00000376561 POLR3FQ9H1D9 316 aaPredicted RBP19.35■□□□□ 0.69
CTTN-203ENST00000376561 AZI2Q9H6S1 392 aa19.35■□□□□ 0.69
CTTN-203ENST00000376561 PDGFCQ9NRA1 345 aa19.35■□□□□ 0.69
CTTN-203ENST00000376561 NRBP2Q9NSY0 501 aa19.35■□□□□ 0.69
CTTN-203ENST00000376561 EXOC7Q9UPT5 735 aa19.35■□□□□ 0.69
CTTN-203ENST00000376561 LRRC53A6NM62 1247 aa19.35■□□□□ 0.69
CTTN-203ENST00000376561 NOP56O00567 594 aaKnown RBP19.35■□□□□ 0.69
CTTN-203ENST00000376561 TTLL4Q14679 1199 aa19.35■□□□□ 0.69
CTTN-203ENST00000376561 FAM110CQ1W6H9 321 aa19.35■□□□□ 0.69
CTTN-203ENST00000376561 CBWD1Q9BRT8 395 aa19.35■□□□□ 0.69
CTTN-203ENST00000376561 PCIF1Q9H4Z3 704 aa19.35■□□□□ 0.69
CTTN-203ENST00000376561 ADGRA3Q8IWK6 1321 aa19.34■□□□□ 0.69
CTTN-203ENST00000376561 TARBP2Q15633 366 aaKnown RBP19.34■□□□□ 0.69
CTTN-203ENST00000376561 GPR142Q7Z601 462 aa19.34■□□□□ 0.69
CTTN-203ENST00000376561 SCFD2Q8WU76 684 aa19.34■□□□□ 0.69
CTTN-203ENST00000376561 COPS5Q92905 334 aa19.34■□□□□ 0.69
CTTN-203ENST00000376561 IFT74Q96LB3 600 aa19.34■□□□□ 0.69
CTTN-203ENST00000376561 NLRC4Q9NPP4 1024 aa19.34■□□□□ 0.69
CTTN-203ENST00000376561 POLR2FP61218 127 aaKnown RBP19.33■□□□□ 0.69
CTTN-203ENST00000376561 APBA1Q02410 837 aa19.33■□□□□ 0.69
CTTN-203ENST00000376561 PPP2R5AQ15172 486 aa19.33■□□□□ 0.69
CTTN-203ENST00000376561 EXOC3L4Q17RC7 722 aa19.33■□□□□ 0.69
CTTN-203ENST00000376561 TMEM63BQ5T3F8 832 aa19.33■□□□□ 0.69
CTTN-203ENST00000376561 PDXDC1Q6P996 788 aa19.33■□□□□ 0.69
CTTN-203ENST00000376561 RDH13Q8NBN7 331 aa19.33■□□□□ 0.69
CTTN-203ENST00000376561 SLC7A3Q8WY07 619 aa19.33■□□□□ 0.69
CTTN-203ENST00000376561 SPATA33Q96N06 139 aa19.33■□□□□ 0.69
CTTN-203ENST00000376561 NHEJ1Q9H9Q4 299 aaPredicted RBP19.33■□□□□ 0.69
CTTN-203ENST00000376561 DIS3Q9Y2L1 958 aaKnown RBP19.33■□□□□ 0.69
CTTN-203ENST00000376561 A0A0U1RQJ8 604 aa19.33■□□□□ 0.68
CTTN-203ENST00000376561 GTPBP10A4D1E9 387 aaKnown RBP19.33■□□□□ 0.68
CTTN-203ENST00000376561 LGR5O75473 907 aa19.33■□□□□ 0.68
CTTN-203ENST00000376561 SLC9A1P19634 815 aa19.33■□□□□ 0.68
CTTN-203ENST00000376561 ZNF467Q7Z7K2 595 aaPredicted RBP19.33■□□□□ 0.68
CTTN-203ENST00000376561 RASAL3Q86YV0 1011 aa19.33■□□□□ 0.68
CTTN-203ENST00000376561 CCDC170Q8IYT3 715 aa19.33■□□□□ 0.68
CTTN-203ENST00000376561 ATRIPQ8WXE1 791 aa19.33■□□□□ 0.68
CTTN-203ENST00000376561 GLG1Q92896 1179 aa19.33■□□□□ 0.68
CTTN-203ENST00000376561 TMEM143Q96AN5 459 aa19.33■□□□□ 0.68
CTTN-203ENST00000376561 GANQ9H2C0 597 aa19.33■□□□□ 0.68
CTTN-203ENST00000376561 PLCB1Q9NQ66 1216 aa19.33■□□□□ 0.68
CTTN-203ENST00000376561 HSPBP1Q9NZL4 362 aa19.33■□□□□ 0.68
CTTN-203ENST00000376561 KCNG1Q9UIX4 513 aa19.33■□□□□ 0.68
CTTN-203ENST00000376561 RIOK3O14730 519 aaKnown RBP19.32■□□□□ 0.68
CTTN-203ENST00000376561 PON1P27169 355 aa19.32■□□□□ 0.68
CTTN-203ENST00000376561 RFC5P40937 340 aa19.32■□□□□ 0.68
CTTN-203ENST00000376561 ZNF157P51786 506 aaPredicted RBP19.32■□□□□ 0.68
CTTN-203ENST00000376561 BFSP1Q12934 665 aa19.32■□□□□ 0.68
CTTN-203ENST00000376561 DPY19L2P1Q6NXN4 242 aa19.32■□□□□ 0.68
CTTN-203ENST00000376561 GBP6Q6ZN66 633 aa19.32■□□□□ 0.68
CTTN-203ENST00000376561 XXYLT1Q8NBI6 393 aa19.32■□□□□ 0.68
CTTN-203ENST00000376561 MYRIPQ8NFW9 859 aa19.32■□□□□ 0.68
CTTN-203ENST00000376561 FAM167AQ96KS9 214 aa19.32■□□□□ 0.68
CTTN-203ENST00000376561 NUCKS1Q9H1E3 243 aaKnown RBP19.32■□□□□ 0.68
CTTN-203ENST00000376561 LZTFL1Q9NQ48 299 aa19.32■□□□□ 0.68
CTTN-203ENST00000376561 ARHGAP28Q9P2N2 729 aa19.32■□□□□ 0.68
CTTN-203ENST00000376561 CNGA1P29973 690 aa19.32■□□□□ 0.68
CTTN-203ENST00000376561 CYLC1P35663 651 aaPredicted RBP19.32■□□□□ 0.68
CTTN-203ENST00000376561 GRB14Q14449 540 aa19.32■□□□□ 0.68
CTTN-203ENST00000376561 TAPT1Q6NXT6 567 aa19.32■□□□□ 0.68
CTTN-203ENST00000376561 PLPPR4Q7Z2D5 763 aa19.32■□□□□ 0.68
CTTN-203ENST00000376561 TRIM50Q86XT4 487 aa19.32■□□□□ 0.68
CTTN-203ENST00000376561 VTA1Q9NP79 307 aa19.32■□□□□ 0.68
CTTN-203ENST00000376561 ARHGAP20Q9P2F6 1191 aa19.32■□□□□ 0.68
CTTN-203ENST00000376561 DNAI1Q9UI46 699 aa19.32■□□□□ 0.68
CTTN-203ENST00000376561 REXO2Q9Y3B8 237 aaKnown RBP19.32■□□□□ 0.68
CTTN-203ENST00000376561 EMSYQ7Z589 1322 aa19.32■□□□□ 0.68
CTTN-203ENST00000376561 ANKRD63C9JTQ0 380 aa19.31■□□□□ 0.68
CTTN-203ENST00000376561 H0YCG3 227 aa19.31■□□□□ 0.68
CTTN-203ENST00000376561 ACTN1P12814 892 aa19.31■□□□□ 0.68
CTTN-203ENST00000376561 ADSSP30520 456 aa19.31■□□□□ 0.68
CTTN-203ENST00000376561 ARL2P36404 184 aa19.31■□□□□ 0.68
CTTN-203ENST00000376561 DPP9Q86TI2 863 aa19.31■□□□□ 0.68
CTTN-203ENST00000376561 BBXQ8WY36 941 aaPredicted RBP19.31■□□□□ 0.68
CTTN-203ENST00000376561 PHLPP2Q6ZVD8 1323 aa19.31■□□□□ 0.68
CTTN-203ENST00000376561 UQCRHLA0A096LP55 91 aa19.31■□□□□ 0.68
CTTN-203ENST00000376561 UQCRHP07919 91 aa19.31■□□□□ 0.68
CTTN-203ENST00000376561 PLEKP08567 350 aaPredicted RBP19.31■□□□□ 0.68
CTTN-203ENST00000376561 MARK3P27448 753 aa19.31■□□□□ 0.68
CTTN-203ENST00000376561 MAPK4P31152 587 aa19.31■□□□□ 0.68
CTTN-203ENST00000376561 FMO5P49326 533 aa19.31■□□□□ 0.68
CTTN-203ENST00000376561 INTS8Q75QN2 995 aaKnown RBP19.31■□□□□ 0.68
CTTN-203ENST00000376561 SYN2Q92777 582 aaPredicted RBP19.31■□□□□ 0.68
CTTN-203ENST00000376561 GCNT4Q9P109 453 aa19.31■□□□□ 0.68
CTTN-203ENST00000376561 IGF2BP3O00425 579 aaKnown RBP eCLIP19.3■□□□□ 0.68
CTTN-203ENST00000376561 MAPK13O15264 365 aa19.3■□□□□ 0.68
CTTN-203ENST00000376561 TRIM49P0CI25 452 aa19.3■□□□□ 0.68
CTTN-203ENST00000376561 TRIM49CP0CI26 452 aa19.3■□□□□ 0.68
CTTN-203ENST00000376561 KRT13P13646 458 aa19.3■□□□□ 0.68
CTTN-203ENST00000376561 GLRA2P23416 452 aa19.3■□□□□ 0.68
CTTN-203ENST00000376561 ABCD1P33897 745 aa19.3■□□□□ 0.68
CTTN-203ENST00000376561 KLHDC7AQ5VTJ3 777 aa19.3■□□□□ 0.68
CTTN-203ENST00000376561 MAMDC4Q6UXC1 1216 aa19.3■□□□□ 0.68
CTTN-203ENST00000376561 TAS1R3Q7RTX0 852 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms