RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 RPUSD2Q8IZ73 545 aaKnown RBP12.75□□□□□ -0.37
MCF2L-202ENST00000375597 ZKSCAN4Q969J2 545 aaPredicted RBP12.75□□□□□ -0.37
MCF2L-202ENST00000375597 C9orf72Q96LT7 481 aa12.75□□□□□ -0.37
MCF2L-202ENST00000375597 TRIM7Q9C029 511 aa12.75□□□□□ -0.37
MCF2L-202ENST00000375597 ABCF3Q9NUQ8 709 aa12.75□□□□□ -0.37
MCF2L-202ENST00000375597 FBXO28Q9NVF7 368 aa12.75□□□□□ -0.37
MCF2L-202ENST00000375597 NEFHP12036 1026 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 MYCLP12524 364 aaPredicted RBP12.74□□□□□ -0.37
MCF2L-202ENST00000375597 SCTRP47872 440 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 PMS2P54278 862 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 RNASELQ05823 741 aaKnown RBP12.74□□□□□ -0.37
MCF2L-202ENST00000375597 RBM26Q5T8P6 1007 aaKnown RBP12.74□□□□□ -0.37
MCF2L-202ENST00000375597 ZNF449Q6P9G9 518 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 RFX8Q6ZV50 586 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 GSTA5Q7RTV2 222 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 TMC3Q7Z5M5 1100 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 PARP9Q8IXQ6 854 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 CERS5Q8N5B7 392 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 TBC1D16Q8TBP0 767 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 TPX2Q9ULW0 747 aaKnown RBP12.74□□□□□ -0.37
MCF2L-202ENST00000375597 SPATA31A1Q5TZJ5 1347 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 MYO3BQ8WXR4 1341 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 TCP11X1B4DZS4 312 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 F5H6K3 240 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 POC1B-GALNT4F8VUJ3 575 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 CCDC172P0C7W6 258 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 EZRP15311 586 aaKnown RBP12.74□□□□□ -0.37
MCF2L-202ENST00000375597 PSMC4P43686 418 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 KLRC3Q07444 240 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 SRRM1Q8IYB3 904 aaKnown RBP12.74□□□□□ -0.37
MCF2L-202ENST00000375597 CCDC63Q8NA47 563 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 CCDC197Q8NCU1 140 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 NEK9Q8TD19 979 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 LMBR1Q8WVP7 490 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 SLC35C1Q96A29 364 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 STAMBPL1Q96FJ0 436 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 TOPORSQ9NS56 1045 aaPredicted RBP12.74□□□□□ -0.37
MCF2L-202ENST00000375597 ALG6Q9Y672 507 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 ABCB11O95342 1321 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 ARHGEF35A5YM69 484 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 IFNB1P01574 187 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 CDK17Q00537 523 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 PLCB3Q01970 1234 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 JAMLQ86YT9 394 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 KCTD10Q9H3F6 313 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 RIOX1Q9H6W3 641 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 PCDHGC5Q9Y5F6 944 aa12.74□□□□□ -0.37
MCF2L-202ENST00000375597 EMSYQ7Z589 1322 aa12.73□□□□□ -0.37
MCF2L-202ENST00000375597 A0A1W2PRG0 241 aa12.73□□□□□ -0.37
MCF2L-202ENST00000375597 F8VZ95 297 aa12.73□□□□□ -0.37
MCF2L-202ENST00000375597 MSH4O15457 936 aa12.73□□□□□ -0.37
MCF2L-202ENST00000375597 GH1P01241 217 aa12.73□□□□□ -0.37
MCF2L-202ENST00000375597 DGKZQ13574 1117 aa12.73□□□□□ -0.37
MCF2L-202ENST00000375597 TMEM119Q4V9L6 283 aa12.73□□□□□ -0.37
MCF2L-202ENST00000375597 MEX3CQ5U5Q3 659 aaKnown RBP12.73□□□□□ -0.37
MCF2L-202ENST00000375597 CDC42EP5Q6NZY7 148 aa12.73□□□□□ -0.37
MCF2L-202ENST00000375597 CCDC137Q6PK04 289 aaKnown RBP12.73□□□□□ -0.37
MCF2L-202ENST00000375597 DPH6Q7L8W6 267 aa12.73□□□□□ -0.37
MCF2L-202ENST00000375597 ANKS4BQ8N8V4 417 aa12.73□□□□□ -0.37
MCF2L-202ENST00000375597 MICAL1Q8TDZ2 1067 aa12.73□□□□□ -0.37
MCF2L-202ENST00000375597 ZNF653Q96CK0 615 aa12.73□□□□□ -0.37
MCF2L-202ENST00000375597 ZNF668Q96K58 619 aaPredicted RBP12.73□□□□□ -0.37
MCF2L-202ENST00000375597 NUP98P52948 1817 aa12.73□□□□□ -0.37
MCF2L-202ENST00000375597 PJA2O43164 708 aa12.73□□□□□ -0.37
MCF2L-202ENST00000375597 COMTP21964 271 aa12.73□□□□□ -0.37
MCF2L-202ENST00000375597 HNRNPH3P31942 346 aaKnown RBP12.73□□□□□ -0.37
MCF2L-202ENST00000375597 HOXD13P35453 343 aa12.73□□□□□ -0.37
MCF2L-202ENST00000375597 KYNUQ16719 465 aa12.73□□□□□ -0.37
MCF2L-202ENST00000375597 ZCWPW2Q504Y3 356 aa12.73□□□□□ -0.37
MCF2L-202ENST00000375597 GLE1Q53GS7 698 aaKnown RBP12.73□□□□□ -0.37
MCF2L-202ENST00000375597 NT5DC3Q86UY8 548 aa12.73□□□□□ -0.37
MCF2L-202ENST00000375597 XPO6Q96QU8 1125 aaKnown RBP12.73□□□□□ -0.37
MCF2L-202ENST00000375597 CBWD1Q9BRT8 395 aa12.73□□□□□ -0.37
MCF2L-202ENST00000375597 INTS2Q9H0H0 1204 aaKnown RBP12.73□□□□□ -0.37
MCF2L-202ENST00000375597 KDM3AQ9Y4C1 1321 aa12.73□□□□□ -0.37
MCF2L-202ENST00000375597 LRP6O75581 1613 aa12.73□□□□□ -0.37
MCF2L-202ENST00000375597 GPR75-ASB3A0A0A6YYF3 556 aa12.72□□□□□ -0.37
MCF2L-202ENST00000375597 PI4K2BG5E9Z4 385 aa12.72□□□□□ -0.37
MCF2L-202ENST00000375597 RPS6KA4O75676 772 aa12.72□□□□□ -0.37
MCF2L-202ENST00000375597 CALCOCO2Q13137 446 aa12.72□□□□□ -0.37
MCF2L-202ENST00000375597 PPP2R5AQ15172 486 aa12.72□□□□□ -0.37
MCF2L-202ENST00000375597 SEL1L2Q5TEA6 688 aa12.72□□□□□ -0.37
MCF2L-202ENST00000375597 DCAF12L1Q5VU92 463 aa12.72□□□□□ -0.37
MCF2L-202ENST00000375597 PROM2Q8N271 834 aa12.72□□□□□ -0.37
MCF2L-202ENST00000375597 CHMP6Q96FZ7 201 aa12.72□□□□□ -0.37
MCF2L-202ENST00000375597 NUCKS1Q9H1E3 243 aaKnown RBP12.72□□□□□ -0.37
MCF2L-202ENST00000375597 PNMA3Q9UL41 463 aa12.72□□□□□ -0.37
MCF2L-202ENST00000375597 COG5Q9UP83 839 aa12.72□□□□□ -0.37
MCF2L-202ENST00000375597 MYH3P11055 1940 aa12.72□□□□□ -0.37
MCF2L-202ENST00000375597 RASGRF2O14827 1237 aa12.72□□□□□ -0.37
MCF2L-202ENST00000375597 GNA14O95837 355 aa12.72□□□□□ -0.37
MCF2L-202ENST00000375597 RPL21P46778 160 aaKnown RBP12.72□□□□□ -0.37
MCF2L-202ENST00000375597 KCNJ2P63252 427 aa12.72□□□□□ -0.37
MCF2L-202ENST00000375597 SKOR1P84550 965 aa12.72□□□□□ -0.37
MCF2L-202ENST00000375597 PSMD2Q13200 908 aa12.72□□□□□ -0.37
MCF2L-202ENST00000375597 PDIA5Q14554 519 aa12.72□□□□□ -0.37
MCF2L-202ENST00000375597 PBKQ96KB5 322 aa12.72□□□□□ -0.37
MCF2L-202ENST00000375597 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.72□□□□□ -0.37
MCF2L-202ENST00000375597 TOGARAM1Q9Y4F4 1720 aa12.72□□□□□ -0.37
MCF2L-202ENST00000375597 SGPL1O95470 568 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms