RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 CD209Q9NNX6 404 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 CYP26A1O43174 497 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 ERFP50548 548 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 HADHQ16836 314 aaKnown RBP7.02□□□□□ -1.29
SMC1A-202ENST00000375340 CDKAL1Q5VV42 579 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 ELOA2Q8IYF1 753 aaPredicted RBP7.02□□□□□ -1.29
SMC1A-202ENST00000375340 DEPDC1BQ8WUY9 529 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 RUBCNQ92622 972 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 SNF8Q96H20 258 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 CA8P35219 290 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 IRAK1P51617 712 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 TFAMQ00059 246 aaKnown RBP7.02□□□□□ -1.29
SMC1A-202ENST00000375340 PPP2R5AQ15172 486 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 PTGISQ16647 500 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 MIS18BP1Q6P0N0 1132 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 KIF2BQ8N4N8 673 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 ZFP69BQ9UJL9 534 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 DIS3Q9Y2L1 958 aaKnown RBP7.02□□□□□ -1.29
SMC1A-202ENST00000375340 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.02□□□□□ -1.29
SMC1A-202ENST00000375340 TMEM191BP0C7N4 346 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 HSD17B3P37058 310 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 SLC18A3Q16572 532 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 GADL1Q6ZQY3 521 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 ANKMY2Q8IV38 441 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 CYTH2Q99418 400 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 NALCNQ8IZF0 1738 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.02□□□□□ -1.29
SMC1A-202ENST00000375340 BBS9Q3SYG4 887 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 ZNF394Q53GI3 561 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 TRIM50Q86XT4 487 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 CPA5Q8WXQ8 436 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 RNF25Q96BH1 459 aaPredicted RBP7.02□□□□□ -1.29
SMC1A-202ENST00000375340 FAM213AQ9BRX8 229 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 APOL6Q9BWW8 343 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 PSD3Q9NYI0 1048 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 LARSQ9P2J5 1176 aaKnown RBP7.02□□□□□ -1.29
SMC1A-202ENST00000375340 NRXN3Q9Y4C0 1643 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 BAZ2BQ9UIF8 2168 aaKnown RBP7.02□□□□□ -1.29
SMC1A-202ENST00000375340 CCDC188H7C350 402 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 DKC1O60832 514 aaKnown RBP eCLIP7.02□□□□□ -1.29
SMC1A-202ENST00000375340 RASA1P20936 1047 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 LGSNQ5TDP6 509 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 RINT1Q6NUQ1 792 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 MMGT1Q8N4V1 131 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 PI4KBQ9UBF8 816 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 DCTN4Q9UJW0 460 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 ECE2O60344 883 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 AOC3Q16853 763 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 EEPD1Q7L9B9 569 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 FRMD5Q7Z6J6 570 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 NCAPG2Q86XI2 1143 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 HDAC7Q8WUI4 952 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 CALN1Q9BXU9 219 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 PITPNM3Q9BZ71 974 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 CCSER1Q9C0I3 900 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 NXF1Q9UBU9 619 aaKnown RBP7.02□□□□□ -1.29
SMC1A-202ENST00000375340 FIS1Q9Y3D6 152 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 PIK3R2O00459 728 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 NDC80O14777 642 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 ABL1P00519 1130 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 BMP6P22004 513 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 PSMA2P25787 234 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 IFRD2Q12894 506 aaPredicted RBP7.01□□□□□ -1.29
SMC1A-202ENST00000375340 BRDTQ58F21 947 aaPredicted RBP7.01□□□□□ -1.29
SMC1A-202ENST00000375340 SH2D4BQ5SQS7 431 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 RHOT2Q8IXI1 618 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 USP38Q8NB14 1042 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 AGPAT1Q99943 283 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 MSTO1Q9BUK6 570 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 RUSC1Q9BVN2 902 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 AGXT2Q9BYV1 514 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 DHX36Q9H2U1 1008 aaKnown RBP7.01□□□□□ -1.29
SMC1A-202ENST00000375340 VCX3BQ9H321 246 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 RAVER2Q9HCJ3 691 aaKnown RBP7.01□□□□□ -1.29
SMC1A-202ENST00000375340 G3BP2Q9UN86 482 aaKnown RBP7.01□□□□□ -1.29
SMC1A-202ENST00000375340 CHD2O14647 1828 aaKnown RBP7.01□□□□□ -1.29
SMC1A-202ENST00000375340 SLIT3O75094 1523 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 TOPAZ1Q8N9V7 1692 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 LMO7Q8WWI1 1683 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 RGPD5Q99666 1765 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 CLDN3O15551 220 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 MEFVO15553 781 aaPredicted RBP7.01□□□□□ -1.29
SMC1A-202ENST00000375340 CPP00450 1065 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 YWHAEP62258 255 aaKnown RBP7.01□□□□□ -1.29
SMC1A-202ENST00000375340 HNRNPLLQ8WVV9 542 aaKnown RBP7.01□□□□□ -1.29
SMC1A-202ENST00000375340 MYH8P13535 1937 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 ZSCAN5CA6NGD5 496 aaPredicted RBP7.01□□□□□ -1.29
SMC1A-202ENST00000375340 HNRNPH1P31943 449 aaKnown RBP7.01□□□□□ -1.29
SMC1A-202ENST00000375340 IL17AQ16552 155 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 LRIG3Q6UXM1 1119 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 PDCD7Q8N8D1 485 aaKnown RBP7.01□□□□□ -1.29
SMC1A-202ENST00000375340 WDR11Q9BZH6 1224 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 SLC40A1Q9NP59 571 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 C5P01031 1676 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 FAM153BP0C7A2 387 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 KLRC1P26715 233 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 AP3B2Q13367 1082 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 FAM153CQ494X1 144 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 C3orf67Q6ZVT6 689 aa7.01□□□□□ -1.29
SMC1A-202ENST00000375340 ANKRD35Q8N283 1001 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms