RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 PSMA7O14818 248 aa13.15□□□□□ -0.31
C9orf3-203ENST00000375315 WFS1O76024 890 aa13.15□□□□□ -0.31
C9orf3-203ENST00000375315 LCA5LO95447 670 aa13.15□□□□□ -0.31
C9orf3-203ENST00000375315 MYBP10242 640 aa13.15□□□□□ -0.31
C9orf3-203ENST00000375315 DNA2P51530 1060 aa13.15□□□□□ -0.31
C9orf3-203ENST00000375315 EIF3BP55884 814 aaKnown RBP13.15□□□□□ -0.31
C9orf3-203ENST00000375315 ERVK-9P63128 1117 aa13.15□□□□□ -0.31
C9orf3-203ENST00000375315 SPDYE2Q495Y8 402 aa13.15□□□□□ -0.31
C9orf3-203ENST00000375315 TTC38Q5R3I4 469 aa13.15□□□□□ -0.31
C9orf3-203ENST00000375315 CCDC174Q6PII3 467 aa13.15□□□□□ -0.31
C9orf3-203ENST00000375315 HOOK3Q86VS8 718 aa13.15□□□□□ -0.31
C9orf3-203ENST00000375315 SIAH1Q8IUQ4 282 aa13.15□□□□□ -0.31
C9orf3-203ENST00000375315 ADSSL1Q8N142 457 aa13.15□□□□□ -0.31
C9orf3-203ENST00000375315 ABCF3Q9NUQ8 709 aa13.15□□□□□ -0.31
C9orf3-203ENST00000375315 MYO3BQ8WXR4 1341 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 DCDC2CA8MYV0 355 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 USP17L15C9J2P7 530 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 USP17L13C9JLJ4 530 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 USP17L11C9JVI0 530 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 USP17L18D6R9N7 530 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 USP17L22D6RA61 530 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 USP17L17D6RBQ6 530 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 USP17L19D6RCP7 530 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 USP17L20D6RJB6 530 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 HNRNPH3P31942 346 aaKnown RBP13.14□□□□□ -0.31
C9orf3-203ENST00000375315 USP17L24Q0WX57 530 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 SF3A3Q12874 501 aaKnown RBP eCLIP13.14□□□□□ -0.313e-7■■■■□ 26.1
C9orf3-203ENST00000375315 NPY5RQ15761 445 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 USP17L6PQ6QN14 398 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 LRRC34Q8IZ02 419 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 ANKRD13CQ8N6S4 541 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 FAM151AQ8WW52 585 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 SELENOSQ9BQE4 189 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 FBXO28Q9NVF7 368 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 ARHGAP20Q9P2F6 1191 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 LRRC42Q9Y546 428 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 SART1O43290 800 aaKnown RBP13.14□□□□□ -0.31
C9orf3-203ENST00000375315 BUB1O43683 1085 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 CREB3O43889 395 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 NDUFB10O96000 172 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 KRT16P08779 473 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 MYBL1P10243 752 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 CHN1P15882 459 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 KLK7P49862 253 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 COPS2P61201 443 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 FAM114A1Q8IWE2 563 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 AGBL3Q8NEM8 1001 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 TLCD1Q96CP7 247 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 JMJD4Q9H9V9 463 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 PIDD1Q9HB75 910 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 KIAA1551Q9HCM1 1747 aa13.14□□□□□ -0.31
C9orf3-203ENST00000375315 E7ENQ6 273 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 PDLIM1O00151 329 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 POLE2P56282 527 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 KLC1Q07866 573 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 ZNF543Q08ER8 600 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 GPR162Q16538 588 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 CMPK2Q5EBM0 449 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 FAM83BQ5T0W9 1011 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 MTMR8Q96EF0 704 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 CCDC17Q96LX7 622 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 DEFB129Q9H1M3 183 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 ARHGEF10LQ9HCE6 1279 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 MYH10P35580 1976 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 PP2D1A8MPX8 630 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 A8MUI8 341 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 ENTPD3O75355 529 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 MTIF2P46199 727 aaKnown RBP13.13□□□□□ -0.31
C9orf3-203ENST00000375315 USP4Q13107 963 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 ADAM9Q13443 819 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 KIAA1755Q5JYT7 1200 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 TAF4BQ92750 862 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 LUC7LQ9NQ29 371 aaKnown RBP13.13□□□□□ -0.31
C9orf3-203ENST00000375315 ARHGEF3Q9NR81 526 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 DDX60LQ5H9U9 1706 aaKnown RBP13.13□□□□□ -0.31
C9orf3-203ENST00000375315 CCNT1O60563 726 aaKnown RBP13.13□□□□□ -0.31
C9orf3-203ENST00000375315 PDHA1P08559 390 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 ATP6V1C1P21283 382 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 ECHS1P30084 290 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 FKBP1AP62942 108 aaKnown RBP13.13□□□□□ -0.31
C9orf3-203ENST00000375315 TSNAXIP1Q2TAA8 658 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 TMEM154Q6P9G4 183 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 TMEM179Q6ZVK1 233 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 CPXCR1Q8N123 301 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 USP38Q8NB14 1042 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 ATL2Q8NHH9 583 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 PLEKHG4BQ96PX9 1271 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 ERGIC2Q96RQ1 377 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 GGA3Q9NZ52 723 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 PNMA2Q9UL42 364 aa13.13□□□□□ -0.31
C9orf3-203ENST00000375315 ZSCAN9O15535 394 aaPredicted RBP13.12□□□□□ -0.31
C9orf3-203ENST00000375315 RCAN1P53805 252 aa13.12□□□□□ -0.31
C9orf3-203ENST00000375315 RNASE9P60153 205 aaKnown RBP13.12□□□□□ -0.31
C9orf3-203ENST00000375315 UBXN2AP68543 259 aa13.12□□□□□ -0.31
C9orf3-203ENST00000375315 C1QTNF12Q5T7M4 302 aa13.12□□□□□ -0.31
C9orf3-203ENST00000375315 PDXDC2PQ6P474 469 aa13.12□□□□□ -0.31
C9orf3-203ENST00000375315 KIF2BQ8N4N8 673 aa13.12□□□□□ -0.31
C9orf3-203ENST00000375315 CSGALNACT2Q8N6G5 542 aa13.12□□□□□ -0.31
C9orf3-203ENST00000375315 MIPOL1Q8TD10 442 aa13.12□□□□□ -0.31
C9orf3-203ENST00000375315 TBC1D5Q92609 795 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms