RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 MIS18BP1Q6P0N0 1132 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 MMGT1Q8N4V1 131 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 DNAAF3Q8N9W5 541 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 TMEM35BQ8NCS4 154 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 MORC4Q8TE76 937 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 RNF25Q96BH1 459 aaPredicted RBP12.35□□□□□ -0.43
PTCH1-203ENST00000375274 ZIM3Q96PE6 472 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 TGS1Q96RS0 853 aaKnown RBP12.35□□□□□ -0.43
PTCH1-203ENST00000375274 CEP152O94986 1710 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 COL15A1P39059 1388 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 ZBED1O96006 694 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 RFX1P22670 979 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 GABPAQ06546 454 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 ZNF394Q53GI3 561 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 OR6B2Q6IFH4 312 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 NCAPG2Q86XI2 1143 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 TTC25Q96NG3 672 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 ERGIC2Q96RQ1 377 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 PLAGL2Q9UPG8 496 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 F5H6K3 240 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 GALCP54803 685 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 ERVK-24P63145 666 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 TMPRSS15P98073 1019 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 KLRC3Q07444 240 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 KIAA1755Q5JYT7 1200 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 RCSD1Q6JBY9 416 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 HACE1Q8IYU2 909 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 PPARGC1AQ9UBK2 798 aaKnown RBP12.35□□□□□ -0.43
PTCH1-203ENST00000375274 UBE2Q2LH0YL09 131 aa12.34□□□□□ -0.43
PTCH1-203ENST00000375274 ST3GAL1Q11201 340 aa12.34□□□□□ -0.43
PTCH1-203ENST00000375274 SBK1Q52WX2 424 aa12.34□□□□□ -0.43
PTCH1-203ENST00000375274 SLFN12LQ6IEE8 588 aa12.34□□□□□ -0.43
PTCH1-203ENST00000375274 WDR93Q6P2C0 686 aa12.34□□□□□ -0.43
PTCH1-203ENST00000375274 DDX27Q96GQ7 796 aaKnown RBP12.34□□□□□ -0.43
PTCH1-203ENST00000375274 MSTO1Q9BUK6 570 aa12.34□□□□□ -0.43
PTCH1-203ENST00000375274 FGFR1OP2Q9NVK5 253 aa12.34□□□□□ -0.43
PTCH1-203ENST00000375274 FAF1Q9UNN5 650 aaPredicted RBP12.34□□□□□ -0.43
PTCH1-203ENST00000375274 IQGAP1P46940 1657 aa12.34□□□□□ -0.43
PTCH1-203ENST00000375274 A0A1W2PQJ5 194 aa12.34□□□□□ -0.43
PTCH1-203ENST00000375274 SH3BP5O60239 455 aa12.34□□□□□ -0.43
PTCH1-203ENST00000375274 LMNAP02545 664 aaKnown RBP12.34□□□□□ -0.43
PTCH1-203ENST00000375274 PSAPP07602 524 aa12.34□□□□□ -0.43
PTCH1-203ENST00000375274 ARL4AP40617 200 aa12.34□□□□□ -0.43
PTCH1-203ENST00000375274 TROAPQ12815 778 aa12.34□□□□□ -0.43
PTCH1-203ENST00000375274 PDE1CQ14123 709 aaPredicted RBP12.34□□□□□ -0.43
PTCH1-203ENST00000375274 PPWD1Q96BP3 646 aaKnown RBP12.34□□□□□ -0.43
PTCH1-203ENST00000375274 ZWILCHQ9H900 591 aa12.34□□□□□ -0.43
PTCH1-203ENST00000375274 CNTNAP5Q8WYK1 1306 aa12.34□□□□□ -0.43
PTCH1-203ENST00000375274 COPEO14579 308 aa12.34□□□□□ -0.43
PTCH1-203ENST00000375274 SLC16A4O15374 487 aa12.34□□□□□ -0.43
PTCH1-203ENST00000375274 PSMA2P25787 234 aa12.34□□□□□ -0.43
PTCH1-203ENST00000375274 KLRC1P26715 233 aa12.34□□□□□ -0.43
PTCH1-203ENST00000375274 OSTNP61366 133 aa12.34□□□□□ -0.43
PTCH1-203ENST00000375274 KRT39Q6A163 491 aa12.34□□□□□ -0.43
PTCH1-203ENST00000375274 SCARA5Q6ZMJ2 495 aa12.34□□□□□ -0.43
PTCH1-203ENST00000375274 PASD1Q8IV76 773 aa12.34□□□□□ -0.43
PTCH1-203ENST00000375274 WDR75Q8IWA0 830 aaKnown RBP12.34□□□□□ -0.43
PTCH1-203ENST00000375274 CYTH2Q99418 400 aa12.34□□□□□ -0.43
PTCH1-203ENST00000375274 EPS15L1Q9UBC2 864 aa12.34□□□□□ -0.43
PTCH1-203ENST00000375274 EMSYQ7Z589 1322 aa12.34□□□□□ -0.43
PTCH1-203ENST00000375274 TLR3O15455 904 aaKnown RBP12.33□□□□□ -0.43
PTCH1-203ENST00000375274 AKR1B1P15121 316 aa12.33□□□□□ -0.43
PTCH1-203ENST00000375274 CD44P16070 742 aaKnown RBP12.33□□□□□ -0.43
PTCH1-203ENST00000375274 ANXA13P27216 316 aa12.33□□□□□ -0.43
PTCH1-203ENST00000375274 PPM1FP49593 454 aaPredicted RBP12.33□□□□□ -0.43
PTCH1-203ENST00000375274 KLK7P49862 253 aa12.33□□□□□ -0.43
PTCH1-203ENST00000375274 SEC24CP53992 1094 aa12.33□□□□□ -0.43
PTCH1-203ENST00000375274 TMEM270Q6UE05 265 aa12.33□□□□□ -0.43
PTCH1-203ENST00000375274 MIGA2Q7L4E1 593 aa12.33□□□□□ -0.43
PTCH1-203ENST00000375274 ZBTB33Q86T24 672 aa12.33□□□□□ -0.43
PTCH1-203ENST00000375274 CRLF3Q8IUI8 442 aa12.33□□□□□ -0.43
PTCH1-203ENST00000375274 C7orf31Q8N865 590 aa12.33□□□□□ -0.43
PTCH1-203ENST00000375274 TTC13Q8NBP0 860 aa12.33□□□□□ -0.43
PTCH1-203ENST00000375274 MCPH1Q8NEM0 835 aa12.33□□□□□ -0.43
PTCH1-203ENST00000375274 ANKS1AQ92625 1134 aa12.33□□□□□ -0.43
PTCH1-203ENST00000375274 SAAL1Q96ER3 474 aa12.33□□□□□ -0.43
PTCH1-203ENST00000375274 AGXT2Q9BYV1 514 aa12.33□□□□□ -0.43
PTCH1-203ENST00000375274 NGRNQ9NPE2 291 aaKnown RBP12.33□□□□□ -0.43
PTCH1-203ENST00000375274 DCTN4Q9UJW0 460 aa12.33□□□□□ -0.43
PTCH1-203ENST00000375274 PPRC1Q5VV67 1664 aaKnown RBP12.33□□□□□ -0.43
PTCH1-203ENST00000375274 GOLGA8QA0A0J9YX86 632 aa12.33□□□□□ -0.44
PTCH1-203ENST00000375274 GOLGA8OA6NCC3 632 aa12.33□□□□□ -0.44
PTCH1-203ENST00000375274 GOLGA8NF8WBI6 632 aa12.33□□□□□ -0.44
PTCH1-203ENST00000375274 RAD51CO43502 376 aa12.33□□□□□ -0.44
PTCH1-203ENST00000375274 GGPS1O95749 300 aa12.33□□□□□ -0.44
PTCH1-203ENST00000375274 LDHAP00338 332 aaKnown RBP12.33□□□□□ -0.44
PTCH1-203ENST00000375274 LRIG3Q6UXM1 1119 aa12.33□□□□□ -0.44
PTCH1-203ENST00000375274 OR2W6PQ8NHA6 318 aa12.33□□□□□ -0.44
PTCH1-203ENST00000375274 C1orf54Q8WWF1 131 aa12.33□□□□□ -0.44
PTCH1-203ENST00000375274 CFAP36Q96G28 342 aa12.33□□□□□ -0.44
PTCH1-203ENST00000375274 MAP3K14Q99558 947 aa12.33□□□□□ -0.44
PTCH1-203ENST00000375274 EIF2AK1Q9BQI3 630 aaKnown RBP12.33□□□□□ -0.44
PTCH1-203ENST00000375274 NACA2Q9H009 215 aa12.33□□□□□ -0.44
PTCH1-203ENST00000375274 ZFP69BQ9UJL9 534 aa12.33□□□□□ -0.44
PTCH1-203ENST00000375274 FGFR4P22455 802 aa12.33□□□□□ -0.44
PTCH1-203ENST00000375274 CORO7P57737 925 aa12.33□□□□□ -0.44
PTCH1-203ENST00000375274 MTMR1Q13613 665 aa12.33□□□□□ -0.44
PTCH1-203ENST00000375274 ZC3H18Q86VM9 953 aaKnown RBP12.33□□□□□ -0.44
PTCH1-203ENST00000375274 SESTD1Q86VW0 696 aa12.33□□□□□ -0.44
PTCH1-203ENST00000375274 TRIM51Q9BSJ1 452 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms