RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 SMAD7O15105 426 aaKnown RBP9.8□□□□□ -0.84
UBR4-201ENST00000375218 IDH1O75874 414 aaKnown RBP9.8□□□□□ -0.84
UBR4-201ENST00000375218 TRPC3Q13507 836 aa9.8□□□□□ -0.84
UBR4-201ENST00000375218 GEN1Q17RS7 908 aa9.8□□□□□ -0.84
UBR4-201ENST00000375218 BEND3Q5T5X7 828 aa9.8□□□□□ -0.84
UBR4-201ENST00000375218 CEP85Q6P2H3 762 aa9.8□□□□□ -0.84
UBR4-201ENST00000375218 OSTM1Q86WC4 334 aa9.8□□□□□ -0.84
UBR4-201ENST00000375218 C10orf67Q8IYJ2 551 aa9.8□□□□□ -0.84
UBR4-201ENST00000375218 ESX1Q8N693 406 aa9.8□□□□□ -0.84
UBR4-201ENST00000375218 GIMAP7Q8NHV1 300 aa9.8□□□□□ -0.84
UBR4-201ENST00000375218 CCHCR1Q8TD31 782 aa9.8□□□□□ -0.84
UBR4-201ENST00000375218 HINFPQ9BQA5 517 aa9.8□□□□□ -0.84
UBR4-201ENST00000375218 TACO1Q9BSH4 297 aaKnown RBP9.8□□□□□ -0.84
UBR4-201ENST00000375218 PRKD2Q9BZL6 878 aa9.8□□□□□ -0.84
UBR4-201ENST00000375218 ZWILCHQ9H900 591 aa9.8□□□□□ -0.84
UBR4-201ENST00000375218 GPR108Q9NPR9 543 aa9.8□□□□□ -0.84
UBR4-201ENST00000375218 ANKRD31Q8N7Z5 1873 aa9.8□□□□□ -0.84
UBR4-201ENST00000375218 CDH23Q9H251 3354 aa9.8□□□□□ -0.84
UBR4-201ENST00000375218 CTAGE9A4FU28 777 aa9.8□□□□□ -0.84
UBR4-201ENST00000375218 PLOD2O00469 737 aa9.8□□□□□ -0.84
UBR4-201ENST00000375218 GOSR1O95249 250 aa9.8□□□□□ -0.84
UBR4-201ENST00000375218 PSMC4P43686 418 aa9.8□□□□□ -0.84
UBR4-201ENST00000375218 AMPHP49418 695 aa9.8□□□□□ -0.84
UBR4-201ENST00000375218 ARHGAP45Q92619 1136 aa9.8□□□□□ -0.84
UBR4-201ENST00000375218 PDPK1O15530 556 aa9.8□□□□□ -0.84
UBR4-201ENST00000375218 SOX5P35711 763 aa9.8□□□□□ -0.84
UBR4-201ENST00000375218 RSBN1LQ6PCB5 846 aaPredicted RBP9.8□□□□□ -0.84
UBR4-201ENST00000375218 CEP128Q6ZU80 1094 aa9.8□□□□□ -0.84
UBR4-201ENST00000375218 SLC7A3Q8WY07 619 aa9.8□□□□□ -0.84
UBR4-201ENST00000375218 TBATAQ96M53 351 aa9.8□□□□□ -0.84
UBR4-201ENST00000375218 LUC7LQ9NQ29 371 aaKnown RBP9.8□□□□□ -0.84
UBR4-201ENST00000375218 EYSQ5T1H1 3165 aa9.8□□□□□ -0.84
UBR4-201ENST00000375218 CCDC69A6NI79 296 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 SLC7A4O43246 635 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 PLTPP55058 493 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 ICA1Q05084 483 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 BYSLQ13895 437 aaKnown RBP9.79□□□□□ -0.84
UBR4-201ENST00000375218 LEKR1Q6ZMV7 388 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 FAM169BQ8N8A8 192 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 LPIN2Q92539 896 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 RAPGEF5Q92565 580 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 TUBA1CQ9BQE3 449 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 TRPV6Q9H1D0 765 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 EXOC7Q9UPT5 735 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 DKC1O60832 514 aaKnown RBP eCLIP9.79□□□□□ -0.84
UBR4-201ENST00000375218 FLOT1O75955 427 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 ATP5BP06576 529 aaKnown RBP9.79□□□□□ -0.84
UBR4-201ENST00000375218 ZNF3P17036 446 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 PMLP29590 882 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 ASMTP46597 345 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 KRT83P78385 493 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 AKAP4Q5JQC9 854 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 STXBP5Q5T5C0 1151 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 GALNT7Q86SF2 657 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 BPHLQ86WA6 291 aaPredicted RBP9.79□□□□□ -0.84
UBR4-201ENST00000375218 UNC5CLQ8IV45 518 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 COL26A1Q96A83 441 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 FAXDC2Q96IV6 333 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 UBXN10Q96LJ8 280 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 SLF1Q9BQI6 1058 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 TARS2Q9BW92 718 aaKnown RBP9.79□□□□□ -0.84
UBR4-201ENST00000375218 IRX2Q9BZI1 471 aaPredicted RBP9.79□□□□□ -0.84
UBR4-201ENST00000375218 ITM2CQ9NQX7 267 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 ECM29Q5VYK3 1845 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 A0A1B0GUL7 405 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 FSCN2O14926 492 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 ERC2O15083 957 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 MYL6P60660 151 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 PERM1Q5SV97 790 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 EMC10Q5UCC4 262 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 SSH3Q8TE77 659 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 NRBF2Q96F24 287 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 ADPGKQ9BRR6 497 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 HAUS2Q9NVX0 235 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 CDK5RAP2Q96SN8 1893 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 CYP11A1P05108 521 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 ACTN1P12814 892 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 C17orf67Q0P5P2 114 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 FUT2Q10981 343 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 KRT71Q3SY84 523 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 SH3RF1Q7Z6J0 888 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 GRAMD2AQ8IUY3 354 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 MYD88Q99836 296 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 MRPL46Q9H2W6 279 aaKnown RBP9.79□□□□□ -0.84
UBR4-201ENST00000375218 UBN1Q9NPG3 1134 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 CCPG1Q9ULG6 757 aa9.79□□□□□ -0.84
UBR4-201ENST00000375218 CETN3O15182 167 aa9.78□□□□□ -0.84
UBR4-201ENST00000375218 MT-CO1P00395 513 aa9.78□□□□□ -0.84
UBR4-201ENST00000375218 ARFIP1P53367 373 aa9.78□□□□□ -0.84
UBR4-201ENST00000375218 YBEYP58557 167 aaPredicted RBP9.78□□□□□ -0.84
UBR4-201ENST00000375218 TBC1D8BQ0IIM8 1120 aa9.78□□□□□ -0.84
UBR4-201ENST00000375218 ANO4Q32M45 955 aa9.78□□□□□ -0.84
UBR4-201ENST00000375218 HABP4Q5JVS0 413 aaKnown RBP9.78□□□□□ -0.84
UBR4-201ENST00000375218 TATDN1Q6P1N9 297 aa9.78□□□□□ -0.84
UBR4-201ENST00000375218 SYDE1Q6ZW31 735 aaPredicted RBP9.78□□□□□ -0.84
UBR4-201ENST00000375218 ANKRD52Q8NB46 1076 aa9.78□□□□□ -0.84
UBR4-201ENST00000375218 NCLNQ969V3 563 aa9.78□□□□□ -0.84
UBR4-201ENST00000375218 TBCBQ99426 244 aa9.78□□□□□ -0.84
UBR4-201ENST00000375218 KLHL11Q9NVR0 708 aa9.78□□□□□ -0.84
UBR4-201ENST00000375218 KBTBD4Q9NVX7 518 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms