RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 CYFIP1Q7L576 1253 aa19.68■□□□□ 0.74
HLA-DQB1-201ENST00000374943 MAP4K3Q8IVH8 894 aa19.68■□□□□ 0.74
HLA-DQB1-201ENST00000374943 DEF6Q9H4E7 631 aa19.68■□□□□ 0.74
HLA-DQB1-201ENST00000374943 SIX2Q9NPC8 291 aa19.68■□□□□ 0.74
HLA-DQB1-201ENST00000374943 GCNT4Q9P109 453 aa19.68■□□□□ 0.74
HLA-DQB1-201ENST00000374943 SEPT9Q9UHD8 586 aaPredicted RBP19.68■□□□□ 0.74
HLA-DQB1-201ENST00000374943 MYH10P35580 1976 aa19.68■□□□□ 0.74
HLA-DQB1-201ENST00000374943 DNAJC25-GNG10A0A024R161 153 aa19.67■□□□□ 0.74
HLA-DQB1-201ENST00000374943 SLC16A4O15374 487 aa19.67■□□□□ 0.74
HLA-DQB1-201ENST00000374943 AKR1B10O60218 316 aa19.67■□□□□ 0.74
HLA-DQB1-201ENST00000374943 FARP2O94887 1054 aaPredicted RBP19.67■□□□□ 0.74
HLA-DQB1-201ENST00000374943 NPTX2P47972 431 aa19.67■□□□□ 0.74
HLA-DQB1-201ENST00000374943 FMO5P49326 533 aa19.67■□□□□ 0.74
HLA-DQB1-201ENST00000374943 BFSP1Q12934 665 aa19.67■□□□□ 0.74
HLA-DQB1-201ENST00000374943 NEDD9Q14511 834 aa19.67■□□□□ 0.74
HLA-DQB1-201ENST00000374943 MTERF4Q7Z6M4 381 aaKnown RBP19.67■□□□□ 0.74
HLA-DQB1-201ENST00000374943 TXLNBQ8N3L3 684 aa19.67■□□□□ 0.74
HLA-DQB1-201ENST00000374943 SHCBP1Q8NEM2 672 aa19.67■□□□□ 0.74
HLA-DQB1-201ENST00000374943 KCNN1Q92952 543 aa19.67■□□□□ 0.74
HLA-DQB1-201ENST00000374943 FGD4Q96M96 766 aa19.67■□□□□ 0.74
HLA-DQB1-201ENST00000374943 NAPGQ99747 312 aaPredicted RBP19.67■□□□□ 0.74
HLA-DQB1-201ENST00000374943 MROH8Q9H579 483 aa19.67■□□□□ 0.74
HLA-DQB1-201ENST00000374943 ATP6V0A4Q9HBG4 840 aa19.67■□□□□ 0.74
HLA-DQB1-201ENST00000374943 ZNF302Q9NR11 478 aa19.67■□□□□ 0.74
HLA-DQB1-201ENST00000374943 GUCA1BQ9UMX6 200 aa19.67■□□□□ 0.74
HLA-DQB1-201ENST00000374943 ABCD1P33897 745 aa19.66■□□□□ 0.74
HLA-DQB1-201ENST00000374943 APBA1Q02410 837 aa19.66■□□□□ 0.74
HLA-DQB1-201ENST00000374943 SP4Q02446 784 aa19.66■□□□□ 0.74
HLA-DQB1-201ENST00000374943 INTS8Q75QN2 995 aaKnown RBP19.66■□□□□ 0.74
HLA-DQB1-201ENST00000374943 LACRTQ9GZZ8 138 aa19.66■□□□□ 0.74
HLA-DQB1-201ENST00000374943 XPNPEP1Q9NQW7 623 aa19.66■□□□□ 0.74
HLA-DQB1-201ENST00000374943 TRIM10Q9UDY6 481 aa19.66■□□□□ 0.74
HLA-DQB1-201ENST00000374943 KCNG1Q9UIX4 513 aa19.66■□□□□ 0.74
HLA-DQB1-201ENST00000374943 PNMA3Q9UL41 463 aa19.66■□□□□ 0.74
HLA-DQB1-201ENST00000374943 TBX20Q9UMR3 447 aa19.66■□□□□ 0.74
HLA-DQB1-201ENST00000374943 PCDHA13Q9Y5I0 950 aa19.66■□□□□ 0.74
HLA-DQB1-201ENST00000374943 RCCD1A6NED2 376 aa19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 PJA2O43164 708 aa19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 OATP04181 439 aa19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 ACTN1P12814 892 aa19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 JAM2P57087 298 aa19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 CYP27A1Q02318 531 aa19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 KIF5AQ12840 1032 aa19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 RAPGEF1Q13905 1077 aa19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 ASIC2Q16515 512 aa19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 KCNV1Q6PIU1 500 aa19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 XXYLT1Q8NBI6 393 aa19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 BSNDQ8WZ55 320 aa19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 SLC10A4Q96EP9 437 aa19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 IFIH1Q9BYX4 1025 aaKnown RBP19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 KMT5AQ9NQR1 393 aa19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 FHOD1Q9Y613 1164 aa19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 H0YCG3 227 aa19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 TADA3O75528 432 aa19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 KRT13P13646 458 aa19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 ATP4AP20648 1035 aa19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 SCP2P22307 547 aa19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 Q3C1V9 767 aa19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 TDRD12Q587J7 1177 aaKnown RBP19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 MNS1Q8NEH6 495 aa19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 MORC4Q8TE76 937 aa19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 AFAP1L1Q8TED9 768 aa19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 MAP7D2Q96T17 732 aa19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 MMP19Q99542 508 aa19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 CBWD1Q9BRT8 395 aa19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 NIFKQ9BYG3 293 aaKnown RBP19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 HSPBP1Q9NZL4 362 aa19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 CDC23Q9UJX2 597 aa19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 SLC45A1Q9Y2W3 748 aa19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 BZW2Q9Y6E2 419 aaKnown RBP19.65■□□□□ 0.74
HLA-DQB1-201ENST00000374943 GSTTP1A0A1W2PQM5 241 aa19.64■□□□□ 0.73
HLA-DQB1-201ENST00000374943 CCDC169A6NNP5 214 aa19.64■□□□□ 0.73
HLA-DQB1-201ENST00000374943 EFCAB8A8MWE9 144 aa19.64■□□□□ 0.73
HLA-DQB1-201ENST00000374943 P4HA2O15460 535 aa19.64■□□□□ 0.73
HLA-DQB1-201ENST00000374943 ANXA13P27216 316 aa19.64■□□□□ 0.73
HLA-DQB1-201ENST00000374943 PRKCIP41743 596 aa19.64■□□□□ 0.73
HLA-DQB1-201ENST00000374943 ERVK-9P63128 1117 aa19.64■□□□□ 0.73
HLA-DQB1-201ENST00000374943 RBM10P98175 930 aaKnown RBP19.64■□□□□ 0.73
HLA-DQB1-201ENST00000374943 KCTD2Q14681 263 aa19.64■□□□□ 0.73
HLA-DQB1-201ENST00000374943 NAA30Q147X3 362 aaPredicted RBP19.64■□□□□ 0.73
HLA-DQB1-201ENST00000374943 METTL7BQ6UX53 244 aa19.64■□□□□ 0.73
HLA-DQB1-201ENST00000374943 TRMT1LQ7Z2T5 733 aaKnown RBP19.64■□□□□ 0.73
HLA-DQB1-201ENST00000374943 LRRN4CLQ8ND94 238 aa19.64■□□□□ 0.73
HLA-DQB1-201ENST00000374943 CARD6Q9BX69 1037 aa19.64■□□□□ 0.73
HLA-DQB1-201ENST00000374943 R3HDMLQ9H3Y0 253 aa19.64■□□□□ 0.73
HLA-DQB1-201ENST00000374943 DENND3A2RUS2 1198 aa19.63■□□□□ 0.73
HLA-DQB1-201ENST00000374943 TISP43B9A030 160 aa19.63■□□□□ 0.73
HLA-DQB1-201ENST00000374943 N4BP1O75113 896 aaKnown RBP19.63■□□□□ 0.73
HLA-DQB1-201ENST00000374943 EMC2Q15006 297 aa19.63■□□□□ 0.73
HLA-DQB1-201ENST00000374943 IRF2BP2Q7Z5L9 587 aa19.63■□□□□ 0.73
HLA-DQB1-201ENST00000374943 SPAG5Q96R06 1193 aa19.63■□□□□ 0.73
HLA-DQB1-201ENST00000374943 DHX33Q9H6R0 707 aaKnown RBP19.63■□□□□ 0.73
HLA-DQB1-201ENST00000374943 PMM2O15305 246 aa19.62■□□□□ 0.73
HLA-DQB1-201ENST00000374943 SORBS3O60504 671 aa19.62■□□□□ 0.73
HLA-DQB1-201ENST00000374943 TRIM49P0CI25 452 aa19.62■□□□□ 0.73
HLA-DQB1-201ENST00000374943 TRIM49CP0CI26 452 aa19.62■□□□□ 0.73
HLA-DQB1-201ENST00000374943 RFX1P22670 979 aa19.62■□□□□ 0.73
HLA-DQB1-201ENST00000374943 FKBP1BP68106 108 aa19.62■□□□□ 0.73
HLA-DQB1-201ENST00000374943 AMPD2Q01433 879 aa19.62■□□□□ 0.73
HLA-DQB1-201ENST00000374943 MYL7Q01449 175 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms