RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 OR2W6PQ8NHA6 318 aa11.74□□□□□ -0.53
CXCL12-203ENST00000374429 KMT5AQ9NQR1 393 aa11.74□□□□□ -0.53
CXCL12-203ENST00000374429 FEM1BQ9UK73 627 aa11.74□□□□□ -0.53
CXCL12-203ENST00000374429 MORC2Q9Y6X9 1032 aaPredicted RBP11.74□□□□□ -0.53
CXCL12-203ENST00000374429 ADAMTSL1Q8N6G6 1762 aa11.74□□□□□ -0.53
CXCL12-203ENST00000374429 IGLV3-22A0A075B6J6 115 aa11.74□□□□□ -0.53
CXCL12-203ENST00000374429 HEXIM1O94992 359 aaKnown RBP11.74□□□□□ -0.53
CXCL12-203ENST00000374429 QARSP47897 775 aaKnown RBP11.74□□□□□ -0.53
CXCL12-203ENST00000374429 WHAMMP3Q1A5X7 153 aa11.74□□□□□ -0.53
CXCL12-203ENST00000374429 SPOPLQ6IQ16 392 aa11.74□□□□□ -0.53
CXCL12-203ENST00000374429 SCARA5Q6ZMJ2 495 aa11.74□□□□□ -0.53
CXCL12-203ENST00000374429 CCDC50Q8IVM0 306 aa11.74□□□□□ -0.53
CXCL12-203ENST00000374429 FUT8Q9BYC5 575 aa11.74□□□□□ -0.53
CXCL12-203ENST00000374429 AGPAT3Q9NRZ7 376 aa11.74□□□□□ -0.53
CXCL12-203ENST00000374429 CWC15Q9P013 229 aaKnown RBP11.74□□□□□ -0.53
CXCL12-203ENST00000374429 DHX9Q08211 1270 aaKnown RBP11.73□□□□□ -0.53
CXCL12-203ENST00000374429 ORC1Q13415 861 aa11.73□□□□□ -0.53
CXCL12-203ENST00000374429 CCDC170Q8IYT3 715 aa11.73□□□□□ -0.53
CXCL12-203ENST00000374429 LRRC71Q8N4P6 559 aa11.73□□□□□ -0.53
CXCL12-203ENST00000374429 ZBTB45Q96K62 511 aaPredicted RBP11.73□□□□□ -0.53
CXCL12-203ENST00000374429 TYW1Q9NV66 732 aaKnown RBP11.73□□□□□ -0.53
CXCL12-203ENST00000374429 CEP72Q9P209 647 aa11.73□□□□□ -0.53
CXCL12-203ENST00000374429 ASTN1O14525 1302 aa11.73□□□□□ -0.53
CXCL12-203ENST00000374429 PIK3R2O00459 728 aa11.73□□□□□ -0.53
CXCL12-203ENST00000374429 ATP2C2O75185 946 aa11.73□□□□□ -0.53
CXCL12-203ENST00000374429 PSMD10O75832 226 aa11.73□□□□□ -0.53
CXCL12-203ENST00000374429 H2AFZP0C0S5 128 aa11.73□□□□□ -0.53
CXCL12-203ENST00000374429 CARSP49589 748 aaKnown RBP11.73□□□□□ -0.53
CXCL12-203ENST00000374429 POLGP54098 1239 aaPredicted RBP11.73□□□□□ -0.53
CXCL12-203ENST00000374429 KLHDC7AQ5VTJ3 777 aa11.73□□□□□ -0.53
CXCL12-203ENST00000374429 H2AFVQ71UI9 128 aa11.73□□□□□ -0.53
CXCL12-203ENST00000374429 RSRC2Q7L4I2 434 aaKnown RBP11.73□□□□□ -0.53
CXCL12-203ENST00000374429 SLC35C1Q96A29 364 aa11.73□□□□□ -0.53
CXCL12-203ENST00000374429 CLMNQ96JQ2 1002 aa11.73□□□□□ -0.53
CXCL12-203ENST00000374429 HSD17B14Q9BPX1 270 aa11.73□□□□□ -0.53
CXCL12-203ENST00000374429 CNTNAP1P78357 1384 aa11.73□□□□□ -0.53
CXCL12-203ENST00000374429 EIF3JO75822 258 aaKnown RBP11.73□□□□□ -0.53
CXCL12-203ENST00000374429 ITGA4P13612 1032 aa11.73□□□□□ -0.53
CXCL12-203ENST00000374429 GGCXP38435 758 aa11.73□□□□□ -0.53
CXCL12-203ENST00000374429 KCNJ6P48051 423 aa11.73□□□□□ -0.53
CXCL12-203ENST00000374429 HDLBPQ00341 1268 aaKnown RBP11.73□□□□□ -0.53
CXCL12-203ENST00000374429 PPP2R5AQ15172 486 aa11.73□□□□□ -0.53
CXCL12-203ENST00000374429 TRAPPC12Q8WVT3 735 aa11.73□□□□□ -0.53
CXCL12-203ENST00000374429 NAP1L4Q99733 375 aaKnown RBP11.73□□□□□ -0.53
CXCL12-203ENST00000374429 TTYH3Q9C0H2 523 aa11.73□□□□□ -0.53
CXCL12-203ENST00000374429 FAM204AQ9H8W3 233 aa11.73□□□□□ -0.53
CXCL12-203ENST00000374429 AMACRQ9UHK6 382 aa11.73□□□□□ -0.53
CXCL12-203ENST00000374429 SUFUQ9UMX1 484 aa11.73□□□□□ -0.53
CXCL12-203ENST00000374429 SNX12Q9UMY4 172 aa11.73□□□□□ -0.53
CXCL12-203ENST00000374429 ZNF541Q9H0D2 1346 aa11.73□□□□□ -0.53
CXCL12-203ENST00000374429 CASZ1Q86V15 1759 aa11.73□□□□□ -0.53
CXCL12-203ENST00000374429 ANKRD63C9JTQ0 380 aa11.72□□□□□ -0.53
CXCL12-203ENST00000374429 KRIT1O00522 736 aa11.72□□□□□ -0.53
CXCL12-203ENST00000374429 RGL2O15211 777 aa11.72□□□□□ -0.53
CXCL12-203ENST00000374429 KRT14P02533 472 aa11.72□□□□□ -0.53
CXCL12-203ENST00000374429 KRT19P08727 400 aa11.72□□□□□ -0.53
CXCL12-203ENST00000374429 TTC31Q49AM3 519 aaPredicted RBP11.72□□□□□ -0.53
CXCL12-203ENST00000374429 CAPN12Q6ZSI9 719 aa11.72□□□□□ -0.53
CXCL12-203ENST00000374429 ZNF720Q7Z2F6 126 aa11.72□□□□□ -0.53
CXCL12-203ENST00000374429 UBLCP1Q8WVY7 318 aaPredicted RBP11.72□□□□□ -0.53
CXCL12-203ENST00000374429 KLHL11Q9NVR0 708 aa11.72□□□□□ -0.53
CXCL12-203ENST00000374429 RNF181Q9P0P0 153 aa11.72□□□□□ -0.53
CXCL12-203ENST00000374429 ADAM21Q9UKJ8 722 aa11.72□□□□□ -0.53
CXCL12-203ENST00000374429 BCORQ6W2J9 1755 aa11.72□□□□□ -0.53
CXCL12-203ENST00000374429 GJB6O95452 261 aa11.72□□□□□ -0.53
CXCL12-203ENST00000374429 FMO5P49326 533 aa11.72□□□□□ -0.53
CXCL12-203ENST00000374429 GALCP54803 685 aa11.72□□□□□ -0.53
CXCL12-203ENST00000374429 CKAP4Q07065 602 aaKnown RBP11.72□□□□□ -0.53
CXCL12-203ENST00000374429 CETN1Q12798 172 aa11.72□□□□□ -0.53
CXCL12-203ENST00000374429 STXBP4Q6ZWJ1 553 aa11.72□□□□□ -0.53
CXCL12-203ENST00000374429 C1orf186Q6ZWK4 172 aa11.72□□□□□ -0.53
CXCL12-203ENST00000374429 CCDC91Q7Z6B0 441 aa11.72□□□□□ -0.53
CXCL12-203ENST00000374429 NLRP4Q96MN2 994 aa11.72□□□□□ -0.53
CXCL12-203ENST00000374429 FNBP1Q96RU3 617 aa11.72□□□□□ -0.53
CXCL12-203ENST00000374429 SPOPO43791 374 aa11.72□□□□□ -0.53
CXCL12-203ENST00000374429 CCNE2O96020 404 aa11.72□□□□□ -0.53
CXCL12-203ENST00000374429 ICAM1P05362 532 aa11.72□□□□□ -0.53
CXCL12-203ENST00000374429 P4HBP07237 508 aaKnown RBP11.72□□□□□ -0.53
CXCL12-203ENST00000374429 PPP1R2P41236 205 aa11.72□□□□□ -0.53
CXCL12-203ENST00000374429 SMTNP53814 917 aa11.72□□□□□ -0.53
CXCL12-203ENST00000374429 PPP3CAQ08209 521 aa11.72□□□□□ -0.53
CXCL12-203ENST00000374429 CFAP221Q4G0U5 840 aa11.72□□□□□ -0.53
CXCL12-203ENST00000374429 TRAPPC11Q7Z392 1133 aa11.72□□□□□ -0.53
CXCL12-203ENST00000374429 TAX1BP1Q86VP1 789 aa11.72□□□□□ -0.53
CXCL12-203ENST00000374429 ZNF280CQ8ND82 737 aa11.72□□□□□ -0.53
CXCL12-203ENST00000374429 CALR3Q96L12 384 aaKnown RBP11.72□□□□□ -0.53
CXCL12-203ENST00000374429 THAP2Q9H0W7 228 aa11.72□□□□□ -0.53
CXCL12-203ENST00000374429 CXorf56Q9H5V9 222 aa11.72□□□□□ -0.53
CXCL12-203ENST00000374429 CCDC151A5D8V7 595 aa11.71□□□□□ -0.53
CXCL12-203ENST00000374429 TUBB4AP04350 444 aa11.71□□□□□ -0.53
CXCL12-203ENST00000374429 DMP1Q13316 513 aaPredicted RBP11.71□□□□□ -0.53
CXCL12-203ENST00000374429 BIRC2Q13490 618 aa11.71□□□□□ -0.53
CXCL12-203ENST00000374429 Q3C1V9 767 aa11.71□□□□□ -0.53
CXCL12-203ENST00000374429 HP1BP3Q5SSJ5 553 aaPredicted RBP11.71□□□□□ -0.53
CXCL12-203ENST00000374429 FAM160B2Q86V87 743 aa11.71□□□□□ -0.53
CXCL12-203ENST00000374429 ARHGEF19Q8IW93 802 aa11.71□□□□□ -0.53
CXCL12-203ENST00000374429 THNSL1Q8IYQ7 743 aa11.71□□□□□ -0.53
CXCL12-203ENST00000374429 SELENOOQ9BVL4 669 aa11.71□□□□□ -0.53
CXCL12-203ENST00000374429 HEMGNQ9BXL5 484 aa11.71□□□□□ -0.53
CXCL12-203ENST00000374429 TLR10Q9BXR5 811 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms