RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 FAM204AQ9H8W3 233 aa31.47■■■□□ 2.63
SSBP3-204ENST00000371320 DAAM1Q9Y4D1 1078 aa31.47■■■□□ 2.63
SSBP3-204ENST00000371320 MYH11P35749 1972 aa31.47■■■□□ 2.63
SSBP3-204ENST00000371320 CCDC172P0C7W6 258 aa31.47■■■□□ 2.63
SSBP3-204ENST00000371320 MYCLP12524 364 aaPredicted RBP31.47■■■□□ 2.63
SSBP3-204ENST00000371320 VCAM1P19320 739 aa31.47■■■□□ 2.63
SSBP3-204ENST00000371320 YWHABP31946 246 aaKnown RBP31.47■■■□□ 2.63
SSBP3-204ENST00000371320 ZNF280AP59817 542 aaPredicted RBP31.47■■■□□ 2.63
SSBP3-204ENST00000371320 SLC16A10Q8TF71 515 aa31.47■■■□□ 2.63
SSBP3-204ENST00000371320 KRT12Q99456 494 aa31.47■■■□□ 2.63
SSBP3-204ENST00000371320 ZBED4O75132 1171 aa31.46■■■□□ 2.63
SSBP3-204ENST00000371320 MTMR2Q13614 643 aa31.46■■■□□ 2.63
SSBP3-204ENST00000371320 GLYCTKQ8IVS8 523 aa31.46■■■□□ 2.63
SSBP3-204ENST00000371320 GPR88Q9GZN0 384 aa31.46■■■□□ 2.63
SSBP3-204ENST00000371320 AGPSO00116 658 aa31.45■■■□□ 2.63
SSBP3-204ENST00000371320 GLI1P08151 1106 aa31.45■■■□□ 2.63
SSBP3-204ENST00000371320 GALCP54803 685 aa31.45■■■□□ 2.63
SSBP3-204ENST00000371320 SPP2Q13103 211 aa31.45■■■□□ 2.63
SSBP3-204ENST00000371320 INTS8Q75QN2 995 aaKnown RBP31.45■■■□□ 2.63
SSBP3-204ENST00000371320 GOLGA6L1Q8N7Z2 621 aa31.45■■■□□ 2.63
SSBP3-204ENST00000371320 RIN2Q8WYP3 895 aaPredicted RBP31.45■■■□□ 2.63
SSBP3-204ENST00000371320 HEXIM1O94992 359 aaKnown RBP31.45■■■□□ 2.62
SSBP3-204ENST00000371320 OLIG1Q8TAK6 271 aa31.45■■■□□ 2.62
SSBP3-204ENST00000371320 TRERF1Q96PN7 1200 aa31.45■■■□□ 2.62
SSBP3-204ENST00000371320 RMDN3Q96TC7 470 aa31.45■■■□□ 2.62
SSBP3-204ENST00000371320 RPAP3Q9H6T3 665 aaPredicted RBP31.45■■■□□ 2.62
SSBP3-204ENST00000371320 GDF3Q9NR23 364 aa31.45■■■□□ 2.62
SSBP3-204ENST00000371320 TISP43B9A030 160 aa31.44■■■□□ 2.62
SSBP3-204ENST00000371320 NPEPPSP55786 919 aa31.44■■■□□ 2.62
SSBP3-204ENST00000371320 TNNC1P63316 161 aa31.44■■■□□ 2.62
SSBP3-204ENST00000371320 PEX26Q7Z412 305 aa31.44■■■□□ 2.62
SSBP3-204ENST00000371320 SYCE1Q8N0S2 351 aa31.44■■■□□ 2.62
SSBP3-204ENST00000371320 CAVIN3Q969G5 261 aa31.44■■■□□ 2.62
SSBP3-204ENST00000371320 SH2D3AQ9BRG2 576 aa31.44■■■□□ 2.62
SSBP3-204ENST00000371320 PNMA2Q9UL42 364 aa31.44■■■□□ 2.62
SSBP3-204ENST00000371320 GUCY2DQ02846 1103 aa31.44■■■□□ 2.62
SSBP3-204ENST00000371320 ARHGAP44Q17R89 818 aa31.44■■■□□ 2.62
SSBP3-204ENST00000371320 SLFN11Q7Z7L1 901 aa31.44■■■□□ 2.62
SSBP3-204ENST00000371320 EPB41L5Q9HCM4 733 aa31.44■■■□□ 2.62
SSBP3-204ENST00000371320 CALCOCO1Q9P1Z2 691 aa31.44■■■□□ 2.62
SSBP3-204ENST00000371320 TCEAL9Q9UHQ7 104 aa31.44■■■□□ 2.62
SSBP3-204ENST00000371320 ASTN2O75129 1339 aaPredicted RBP31.43■■■□□ 2.62
SSBP3-204ENST00000371320 CEP104O60308 925 aa31.43■■■□□ 2.62
SSBP3-204ENST00000371320 RFX1P22670 979 aa31.43■■■□□ 2.62
SSBP3-204ENST00000371320 VAMP7P51809 220 aa31.43■■■□□ 2.62
SSBP3-204ENST00000371320 UGCGQ16739 394 aa31.43■■■□□ 2.62
SSBP3-204ENST00000371320 PTPROQ16827 1216 aa31.43■■■□□ 2.62
SSBP3-204ENST00000371320 DALRD3Q5D0E6 543 aaKnown RBP31.43■■■□□ 2.62
SSBP3-204ENST00000371320 TAF3Q5VWG9 929 aa31.43■■■□□ 2.62
SSBP3-204ENST00000371320 PHLDB3Q6NSJ2 640 aa31.43■■■□□ 2.62
SSBP3-204ENST00000371320 RNF207Q6ZRF8 634 aa31.43■■■□□ 2.62
SSBP3-204ENST00000371320 C12orf56Q8IXR9 622 aa31.43■■■□□ 2.62
SSBP3-204ENST00000371320 C4orf19Q8IY42 314 aa31.43■■■□□ 2.62
SSBP3-204ENST00000371320 TMEM174Q8WUU8 243 aa31.43■■■□□ 2.62
SSBP3-204ENST00000371320 PDCD2LQ9BRP1 358 aa31.43■■■□□ 2.62
SSBP3-204ENST00000371320 CBWD1Q9BRT8 395 aa31.43■■■□□ 2.62
SSBP3-204ENST00000371320 TIPINQ9BVW5 301 aa31.43■■■□□ 2.62
SSBP3-204ENST00000371320 EMSYQ7Z589 1322 aa31.43■■■□□ 2.62
SSBP3-204ENST00000371320 TMCO5BA8MYB1 307 aa31.42■■■□□ 2.62
SSBP3-204ENST00000371320 DLG4P78352 724 aa31.42■■■□□ 2.62
SSBP3-204ENST00000371320 CETN1Q12798 172 aa31.42■■■□□ 2.62
SSBP3-204ENST00000371320 HAUS6Q7Z4H7 955 aa31.42■■■□□ 2.62
SSBP3-204ENST00000371320 LMO3Q8TAP4 145 aa31.42■■■□□ 2.62
SSBP3-204ENST00000371320 SYT11Q9BT88 431 aa31.42■■■□□ 2.62
SSBP3-204ENST00000371320 PXMP2Q9NR77 195 aa31.42■■■□□ 2.62
SSBP3-204ENST00000371320 TMEM59LQ9UK28 342 aa31.42■■■□□ 2.62
SSBP3-204ENST00000371320 TMEM150BA6NC51 233 aa31.42■■■□□ 2.62
SSBP3-204ENST00000371320 BACH1O14867 736 aa31.42■■■□□ 2.62
SSBP3-204ENST00000371320 ATP9AO75110 1047 aa31.42■■■□□ 2.62
SSBP3-204ENST00000371320 CAPN2P17655 700 aa31.42■■■□□ 2.62
SSBP3-204ENST00000371320 JAK3P52333 1124 aa31.42■■■□□ 2.62
SSBP3-204ENST00000371320 HNRNPH2P55795 449 aaKnown RBP31.42■■■□□ 2.62
SSBP3-204ENST00000371320 TGFB2P61812 414 aa31.42■■■□□ 2.62
SSBP3-204ENST00000371320 PSMC5P62195 406 aa31.42■■■□□ 2.62
SSBP3-204ENST00000371320 ARHGEF16Q5VV41 709 aa31.42■■■□□ 2.62
SSBP3-204ENST00000371320 NSMFQ6X4W1 530 aa31.42■■■□□ 2.62
SSBP3-204ENST00000371320 DAAM2Q86T65 1068 aa31.42■■■□□ 2.62
SSBP3-204ENST00000371320 ACTRT1Q8TDG2 376 aa31.42■■■□□ 2.62
SSBP3-204ENST00000371320 AFAP1L1Q8TED9 768 aa31.42■■■□□ 2.62
SSBP3-204ENST00000371320 SUCLA2Q9P2R7 463 aaPredicted RBP31.42■■■□□ 2.62
SSBP3-204ENST00000371320 WDR64B1ANS9 1081 aa31.41■■■□□ 2.62
SSBP3-204ENST00000371320 GTF2BQ00403 316 aa31.41■■■□□ 2.62
SSBP3-204ENST00000371320 NNTQ13423 1086 aa31.41■■■□□ 2.62
SSBP3-204ENST00000371320 TRMT1LQ7Z2T5 733 aaKnown RBP31.41■■■□□ 2.62
SSBP3-204ENST00000371320 XXYLT1Q8NBI6 393 aa31.41■■■□□ 2.62
SSBP3-204ENST00000371320 PLEKHA4Q9H4M7 779 aa31.41■■■□□ 2.62
SSBP3-204ENST00000371320 HSPBP1Q9NZL4 362 aa31.41■■■□□ 2.62
SSBP3-204ENST00000371320 TMEM253P0C7T8 217 aa31.4■■■□□ 2.62
SSBP3-204ENST00000371320 TNFAIP3P21580 790 aa31.4■■■□□ 2.62
SSBP3-204ENST00000371320 RPS12P25398 132 aaKnown RBP31.4■■■□□ 2.62
SSBP3-204ENST00000371320 CARSP49589 748 aaKnown RBP31.4■■■□□ 2.62
SSBP3-204ENST00000371320 PAK2Q13177 524 aa31.4■■■□□ 2.62
SSBP3-204ENST00000371320 IFT81Q8WYA0 676 aa31.4■■■□□ 2.62
SSBP3-204ENST00000371320 ST6GALNAC4Q9H4F1 302 aa31.4■■■□□ 2.62
SSBP3-204ENST00000371320 STXBP5LQ9Y2K9 1186 aa31.4■■■□□ 2.62
SSBP3-204ENST00000371320 TESPA1A2RU30 521 aaPredicted RBP31.4■■■□□ 2.62
SSBP3-204ENST00000371320 KLHL7Q8IXQ5 586 aa31.4■■■□□ 2.62
SSBP3-204ENST00000371320 METTL13Q8N6R0 699 aa31.4■■■□□ 2.62
SSBP3-204ENST00000371320 GPRC5CQ9NQ84 441 aa31.4■■■□□ 2.62
SSBP3-204ENST00000371320 NFU1Q9UMS0 254 aa31.4■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms