RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 ZNF568Q3ZCX4 644 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 XKR3Q5GH77 459 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 GPRASP2Q96D09 838 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 LRCH3Q96II8 777 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 SUFUQ9UMX1 484 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 COLQQ9Y215 455 aaPredicted RBP7.72□□□□□ -1.17
USP1-202ENST00000371146 GOLGA6CA6NDK9 693 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 GOLGA6BA6NDN3 693 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 GOLGA6DP0CG33 693 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 JAK3P52333 1124 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 FPGSQ05932 587 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 ARHGAP1Q07960 439 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 EMC2Q15006 297 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 ZNF394Q53GI3 561 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 SCARA5Q6ZMJ2 495 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 HS2ST1Q7LGA3 356 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 RPAINQ86UA6 219 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 ANKS1AQ92625 1134 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 DNAJC25Q9H1X3 360 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 PRDM12Q9H4Q4 367 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 CDHR5Q9HBB8 845 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 GOLGA6AQ9NYA3 693 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 PCDHB7Q9Y5E2 793 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 SZT2Q5T011 3432 aa7.71□□□□□ -1.17
USP1-202ENST00000371146 GSTTP1A0A1W2PQM5 241 aa7.71□□□□□ -1.17
USP1-202ENST00000371146 SCAMP3O14828 347 aaKnown RBP7.71□□□□□ -1.17
USP1-202ENST00000371146 PER2O15055 1255 aa7.71□□□□□ -1.17
USP1-202ENST00000371146 FGFR1P11362 822 aa7.71□□□□□ -1.17
USP1-202ENST00000371146 CD151P48509 253 aa7.71□□□□□ -1.17
USP1-202ENST00000371146 AMPD3Q01432 767 aa7.71□□□□□ -1.17
USP1-202ENST00000371146 FAM200AQ8TCP9 573 aa7.71□□□□□ -1.17
USP1-202ENST00000371146 LEO1Q8WVC0 666 aaPredicted RBP7.71□□□□□ -1.17
USP1-202ENST00000371146 MRPS27Q92552 414 aaKnown RBP7.71□□□□□ -1.17
USP1-202ENST00000371146 SEPT8Q92599 483 aa7.71□□□□□ -1.17
USP1-202ENST00000371146 LARP4BQ92615 738 aaKnown RBP7.71□□□□□ -1.17
USP1-202ENST00000371146 CRACR2AQ9BSW2 395 aa7.71□□□□□ -1.17
USP1-202ENST00000371146 ATP6V0A4Q9HBG4 840 aa7.71□□□□□ -1.17
USP1-202ENST00000371146 OGFRQ9NZT2 677 aa7.71□□□□□ -1.17
USP1-202ENST00000371146 SLC45A1Q9Y2W3 748 aa7.71□□□□□ -1.17
USP1-202ENST00000371146 CDK5RAP2Q96SN8 1893 aa7.71□□□□□ -1.18
USP1-202ENST00000371146 GOLGA6L19H0YKK7 550 aa7.71□□□□□ -1.18
USP1-202ENST00000371146 HIP1RO75146 1068 aa7.71□□□□□ -1.18
USP1-202ENST00000371146 NPTXRO95502 500 aa7.71□□□□□ -1.18
USP1-202ENST00000371146 TGFB3P10600 412 aa7.71□□□□□ -1.18
USP1-202ENST00000371146 GCFC2P16383 781 aaKnown RBP7.71□□□□□ -1.18
USP1-202ENST00000371146 ATP2A2P16615 1042 aaKnown RBP7.71□□□□□ -1.18
USP1-202ENST00000371146 PURAQ00577 322 aaKnown RBP7.71□□□□□ -1.18
USP1-202ENST00000371146 FUT2Q10981 343 aa7.71□□□□□ -1.18
USP1-202ENST00000371146 SHHQ15465 462 aa7.71□□□□□ -1.18
USP1-202ENST00000371146 PPP2R2DQ66LE6 453 aa7.71□□□□□ -1.18
USP1-202ENST00000371146 GALNT17Q6IS24 598 aa7.71□□□□□ -1.18
USP1-202ENST00000371146 RUFY4Q6ZNE9 571 aa7.71□□□□□ -1.18
USP1-202ENST00000371146 USP37Q86T82 979 aa7.71□□□□□ -1.18
USP1-202ENST00000371146 KIAA0319LQ8IZA0 1049 aa7.71□□□□□ -1.18
USP1-202ENST00000371146 KCNG4Q8TDN1 519 aa7.71□□□□□ -1.18
USP1-202ENST00000371146 AUTS2Q8WXX7 1259 aa7.71□□□□□ -1.18
USP1-202ENST00000371146 SMARCE1Q969G3 411 aa7.71□□□□□ -1.18
USP1-202ENST00000371146 INPP4AQ96PE3 977 aaPredicted RBP7.71□□□□□ -1.18
USP1-202ENST00000371146 ALG13Q9NP73 1137 aaKnown RBP7.71□□□□□ -1.18
USP1-202ENST00000371146 PANK4Q9NVE7 773 aa7.71□□□□□ -1.18
USP1-202ENST00000371146 RSPH14Q9UHP6 348 aa7.71□□□□□ -1.18
USP1-202ENST00000371146 MSRAQ9UJ68 235 aa7.71□□□□□ -1.18
USP1-202ENST00000371146 COL4A3BPQ9Y5P4 624 aa7.71□□□□□ -1.18
USP1-202ENST00000371146 WDR87Q6ZQQ6 2873 aa7.7□□□□□ -1.18
USP1-202ENST00000371146 SPATA31C2B4DYI2 1134 aa7.7□□□□□ -1.18
USP1-202ENST00000371146 TISP43B9A030 160 aa7.7□□□□□ -1.18
USP1-202ENST00000371146 SSTR3P32745 418 aaPredicted RBP7.7□□□□□ -1.18
USP1-202ENST00000371146 CTNNB1P35222 781 aa7.7□□□□□ -1.18
USP1-202ENST00000371146 NDUFA8P51970 172 aa7.7□□□□□ -1.18
USP1-202ENST00000371146 YARSP54577 528 aaKnown RBP7.7□□□□□ -1.18
USP1-202ENST00000371146 PRPF4BQ13523 1007 aaKnown RBP7.7□□□□□ -1.18
USP1-202ENST00000371146 LRRC8DQ7L1W4 858 aa7.7□□□□□ -1.18
USP1-202ENST00000371146 SFR1Q86XK3 245 aa7.7□□□□□ -1.18
USP1-202ENST00000371146 CCDC65Q8IXS2 484 aa7.7□□□□□ -1.18
USP1-202ENST00000371146 KCTD17Q8N5Z5 321 aa7.7□□□□□ -1.18
USP1-202ENST00000371146 ZBTB45Q96K62 511 aaPredicted RBP7.7□□□□□ -1.18
USP1-202ENST00000371146 FAM20AQ96MK3 541 aa7.7□□□□□ -1.18
USP1-202ENST00000371146 NUCKS1Q9H1E3 243 aaKnown RBP7.7□□□□□ -1.18
USP1-202ENST00000371146 PIDD1Q9HB75 910 aa7.7□□□□□ -1.18
USP1-202ENST00000371146 CYP26B1Q9NR63 512 aa7.7□□□□□ -1.18
USP1-202ENST00000371146 CXXC1Q9P0U4 656 aaPredicted RBP7.7□□□□□ -1.18
USP1-202ENST00000371146 ST3GAL5Q9UNP4 418 aa7.7□□□□□ -1.18
USP1-202ENST00000371146 ROBO3Q96MS0 1386 aa7.7□□□□□ -1.18
USP1-202ENST00000371146 SYCE3A1L190 88 aa7.7□□□□□ -1.18
USP1-202ENST00000371146 B4GALT5O43286 388 aa7.7□□□□□ -1.18
USP1-202ENST00000371146 ZNF862O60290 1169 aa7.7□□□□□ -1.18
USP1-202ENST00000371146 PFKFB1P16118 471 aa7.7□□□□□ -1.18
USP1-202ENST00000371146 HSD17B4P51659 736 aa7.7□□□□□ -1.18
USP1-202ENST00000371146 STIM1Q13586 685 aa7.7□□□□□ -1.18
USP1-202ENST00000371146 FAM109BQ6ICB4 259 aaPredicted RBP7.7□□□□□ -1.18
USP1-202ENST00000371146 ARMCX5Q6P1M9 558 aa7.7□□□□□ -1.18
USP1-202ENST00000371146 PALB2Q86YC2 1186 aa7.7□□□□□ -1.18
USP1-202ENST00000371146 ZNF710Q8N1W2 664 aa7.7□□□□□ -1.18
USP1-202ENST00000371146 DDX12PQ92771 950 aa7.7□□□□□ -1.18
USP1-202ENST00000371146 GAD1Q99259 594 aa7.7□□□□□ -1.18
USP1-202ENST00000371146 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.7□□□□□ -1.185e-6■■■□□ 16.3
USP1-202ENST00000371146 CXorf56Q9H5V9 222 aa7.7□□□□□ -1.18
USP1-202ENST00000371146 COL24A1Q17RW2 1714 aa7.7□□□□□ -1.18
USP1-202ENST00000371146 CLDN3O15551 220 aa7.7□□□□□ -1.18
USP1-202ENST00000371146 GTPBP6O43824 516 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms