RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 C17orf75Q9HAS0 396 aa15.25■□□□□ 0.03
SSR4-202ENST00000370085 MAGEF1Q9HAY2 307 aa15.25■□□□□ 0.03
SSR4-202ENST00000370085 PADI3Q9ULW8 664 aa15.25■□□□□ 0.03
SSR4-202ENST00000370085 COLQQ9Y215 455 aaPredicted RBP15.25■□□□□ 0.03
SSR4-202ENST00000370085 PHLPP2Q6ZVD8 1323 aa15.24■□□□□ 0.03
SSR4-202ENST00000370085 DENND3A2RUS2 1198 aa15.24■□□□□ 0.03
SSR4-202ENST00000370085 LRRIQ4A6NIV6 560 aa15.24■□□□□ 0.03
SSR4-202ENST00000370085 AMHP03971 560 aa15.24■□□□□ 0.03
SSR4-202ENST00000370085 ZSCAN20P17040 1043 aaPredicted RBP15.24■□□□□ 0.03
SSR4-202ENST00000370085 CMA1P23946 247 aa15.24■□□□□ 0.03
SSR4-202ENST00000370085 NAMPTP43490 491 aa15.24■□□□□ 0.03
SSR4-202ENST00000370085 EPHB4P54760 987 aa15.24■□□□□ 0.03
SSR4-202ENST00000370085 SLC12A3P55017 1021 aa15.24■□□□□ 0.03
SSR4-202ENST00000370085 DMP1Q13316 513 aaPredicted RBP15.24■□□□□ 0.03
SSR4-202ENST00000370085 DHX8Q14562 1220 aaKnown RBP15.24■□□□□ 0.03
SSR4-202ENST00000370085 RESP18Q5W5W9 173 aa15.24■□□□□ 0.03
SSR4-202ENST00000370085 C1orf186Q6ZWK4 172 aa15.24■□□□□ 0.03
SSR4-202ENST00000370085 C16orf59Q7L2K0 433 aa15.24■□□□□ 0.03
SSR4-202ENST00000370085 KCNK18Q7Z418 384 aa15.24■□□□□ 0.03
SSR4-202ENST00000370085 PDILTQ8N807 584 aa15.24■□□□□ 0.03
SSR4-202ENST00000370085 SLC9A7Q96T83 725 aa15.24■□□□□ 0.03
SSR4-202ENST00000370085 PRO3102Q9H379 93 aa15.24■□□□□ 0.03
SSR4-202ENST00000370085 ODF2LQ9ULJ1 636 aa15.24■□□□□ 0.03
SSR4-202ENST00000370085 NOC2LQ9Y3T9 749 aaKnown RBP15.24■□□□□ 0.03
SSR4-202ENST00000370085 SIP14410 1827 aa15.24■□□□□ 0.03
SSR4-202ENST00000370085 TRIOBPQ9H2D6 2365 aa15.24■□□□□ 0.03
SSR4-202ENST00000370085 MYH11P35749 1972 aa15.24■□□□□ 0.03
SSR4-202ENST00000370085 TBCAO75347 108 aaKnown RBP15.23■□□□□ 0.03
SSR4-202ENST00000370085 ERLIN2O94905 339 aa15.23■□□□□ 0.03
SSR4-202ENST00000370085 SMTNP53814 917 aa15.23■□□□□ 0.03
SSR4-202ENST00000370085 MCM6Q14566 821 aa15.23■□□□□ 0.03
SSR4-202ENST00000370085 GPNMBQ14956 572 aa15.23■□□□□ 0.03
SSR4-202ENST00000370085 C9orf50Q5SZB4 431 aa15.23■□□□□ 0.03
SSR4-202ENST00000370085 SHC4Q6S5L8 630 aa15.23■□□□□ 0.03
SSR4-202ENST00000370085 CATSPER4Q7RTX7 472 aa15.23■□□□□ 0.03
SSR4-202ENST00000370085 KSR1Q8IVT5 923 aa15.23■□□□□ 0.03
SSR4-202ENST00000370085 CEP57L1Q8IYX8 460 aa15.23■□□□□ 0.03
SSR4-202ENST00000370085 DEPTORQ8TB45 409 aa15.23■□□□□ 0.03
SSR4-202ENST00000370085 PHOSPHO2Q8TCD6 241 aa15.23■□□□□ 0.03
SSR4-202ENST00000370085 ZNF668Q96K58 619 aaPredicted RBP15.23■□□□□ 0.03
SSR4-202ENST00000370085 NFKBIZQ9BYH8 718 aa15.23■□□□□ 0.03
SSR4-202ENST00000370085 PANK2Q9BZ23 570 aa15.23■□□□□ 0.03
SSR4-202ENST00000370085 CDHR5Q9HBB8 845 aa15.23■□□□□ 0.03
SSR4-202ENST00000370085 DACT1Q9NYF0 836 aa15.23■□□□□ 0.03
SSR4-202ENST00000370085 PCDH10Q9P2E7 1040 aa15.23■□□□□ 0.03
SSR4-202ENST00000370085 LARSQ9P2J5 1176 aaKnown RBP15.23■□□□□ 0.03
SSR4-202ENST00000370085 USP25Q9UHP3 1055 aa15.23■□□□□ 0.03
SSR4-202ENST00000370085 KCNH3Q9ULD8 1083 aa15.23■□□□□ 0.03
SSR4-202ENST00000370085 ST3GAL5Q9UNP4 418 aa15.23■□□□□ 0.03
SSR4-202ENST00000370085 RANBP2P49792 3224 aaKnown RBP15.23■□□□□ 0.03
SSR4-202ENST00000370085 A0A1W2PQ27 194 aa15.22■□□□□ 0.03
SSR4-202ENST00000370085 A0A1W2PQ64 194 aa15.22■□□□□ 0.03
SSR4-202ENST00000370085 A0A1W2PQD8 194 aa15.22■□□□□ 0.03
SSR4-202ENST00000370085 H0YCG3 227 aa15.22■□□□□ 0.03
SSR4-202ENST00000370085 POLR2DO15514 142 aaKnown RBP15.22■□□□□ 0.03
SSR4-202ENST00000370085 HIP1RO75146 1068 aa15.22■□□□□ 0.03
SSR4-202ENST00000370085 FAM13AO94988 1023 aa15.22■□□□□ 0.03
SSR4-202ENST00000370085 SCP2P22307 547 aa15.22■□□□□ 0.03
SSR4-202ENST00000370085 GLRA2P23416 452 aa15.22■□□□□ 0.03
SSR4-202ENST00000370085 ABCD1P33897 745 aa15.22■□□□□ 0.03
SSR4-202ENST00000370085 EFNA5P52803 228 aa15.22■□□□□ 0.03
SSR4-202ENST00000370085 PTENP60484 403 aa15.22■□□□□ 0.03
SSR4-202ENST00000370085 CAPSQ13938 189 aa15.22■□□□□ 0.03
SSR4-202ENST00000370085 FAM228AQ86W67 206 aa15.22■□□□□ 0.03
SSR4-202ENST00000370085 ASAP3Q8TDY4 903 aa15.22■□□□□ 0.03
SSR4-202ENST00000370085 TMEM40Q8WWA1 233 aa15.22■□□□□ 0.03
SSR4-202ENST00000370085 RUSC1Q9BVN2 902 aa15.22■□□□□ 0.03
SSR4-202ENST00000370085 TNMDQ9H2S6 317 aa15.22■□□□□ 0.03
SSR4-202ENST00000370085 AGO3Q9H9G7 860 aaKnown RBP15.22■□□□□ 0.03
SSR4-202ENST00000370085 ERVK-5Q9HDB9 667 aa15.22■□□□□ 0.03
SSR4-202ENST00000370085 GPRC5CQ9NQ84 441 aa15.22■□□□□ 0.03
SSR4-202ENST00000370085 CHST12Q9NRB3 414 aa15.22■□□□□ 0.03
SSR4-202ENST00000370085 BLOC1S4Q9NUP1 217 aa15.22■□□□□ 0.03
SSR4-202ENST00000370085 MICAL3Q7RTP6 2002 aa15.22■□□□□ 0.03
SSR4-202ENST00000370085 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.21■□□□□ 0.03
SSR4-202ENST00000370085 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.21■□□□□ 0.03
SSR4-202ENST00000370085 CCDC169A6NNP5 214 aa15.21■□□□□ 0.03
SSR4-202ENST00000370085 INO80B-WBP1J3KQ70 363 aa15.21■□□□□ 0.03
SSR4-202ENST00000370085 ATP2A2P16615 1042 aaKnown RBP15.21■□□□□ 0.03
SSR4-202ENST00000370085 AXLP30530 894 aa15.21■□□□□ 0.03
SSR4-202ENST00000370085 WDR5P61964 334 aaKnown RBP15.21■□□□□ 0.03
SSR4-202ENST00000370085 RAD51AP2Q09MP3 1159 aa15.21■□□□□ 0.03
SSR4-202ENST00000370085 RASIP1Q5U651 963 aa15.21■□□□□ 0.03
SSR4-202ENST00000370085 IFNLR1Q8IU57 520 aaPredicted RBP15.21■□□□□ 0.03
SSR4-202ENST00000370085 SLC17A8Q8NDX2 589 aa15.21■□□□□ 0.03
SSR4-202ENST00000370085 MRPS27Q92552 414 aaKnown RBP15.21■□□□□ 0.03
SSR4-202ENST00000370085 DHX58Q96C10 678 aa15.21■□□□□ 0.03
SSR4-202ENST00000370085 IFT122Q9HBG6 1241 aa15.21■□□□□ 0.03
SSR4-202ENST00000370085 PARVGQ9HBI0 331 aa15.21■□□□□ 0.03
SSR4-202ENST00000370085 GDPD2Q9HCC8 539 aa15.21■□□□□ 0.03
SSR4-202ENST00000370085 C1orf112Q9NSG2 853 aa15.21■□□□□ 0.03
SSR4-202ENST00000370085 STAG3L1P0CL83 205 aa15.2■□□□□ 0.02
SSR4-202ENST00000370085 SKIP12755 728 aa15.2■□□□□ 0.02
SSR4-202ENST00000370085 PLS3P13797 630 aa15.2■□□□□ 0.02
SSR4-202ENST00000370085 SYKP43405 635 aa15.2■□□□□ 0.02
SSR4-202ENST00000370085 PEX3P56589 373 aa15.2■□□□□ 0.02
SSR4-202ENST00000370085 MAPK6Q16659 721 aa15.2■□□□□ 0.02
SSR4-202ENST00000370085 TMEM132AQ24JP5 1023 aa15.2■□□□□ 0.02
SSR4-202ENST00000370085 LRIT3Q3SXY7 679 aa15.2■□□□□ 0.02
SSR4-202ENST00000370085 MYOCDQ8IZQ8 938 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms