RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 PHKA2P46019 1235 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 MAPK7Q13164 816 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 GIT2Q14161 759 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 KANK3Q6NY19 840 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 CNNM4Q6P4Q7 775 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 TSHZ1Q6ZSZ6 1077 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 KSR1Q8IVT5 923 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 DAW1Q8N136 415 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 RNF149Q8NC42 400 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 CNNM3Q8NE01 707 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 ENGASEQ8NFI3 743 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 ASAP3Q8TDY4 903 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 OSMRQ99650 979 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 LTBP2Q14767 1821 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 EVPLQ92817 2033 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 A0A087WZ62 844 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 MYMKA6NI61 221 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 NBNO60934 754 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 SRGAP2CP0DJJ0 459 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 PLS3P13797 630 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 DARSP14868 501 aaKnown RBP17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 ZNF131P52739 623 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 RAD51AP2Q09MP3 1159 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 DMP1Q13316 513 aaPredicted RBP17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 SNW1Q13573 536 aaKnown RBP17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 CAPSQ13938 189 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 MBTPS1Q14703 1052 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 PCBP1Q15365 356 aaKnown RBP eCLIP17.19■□□□□ 0.343e-6■■□□□ 11.6
PRPF38B-202ENST00000370022 KRBA2Q6ZNG9 492 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 SRGAP1Q7Z6B7 1085 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 IFNLR1Q8IU57 520 aaPredicted RBP17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 TIGD1Q96MW7 591 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 PPP1R16BQ96T49 567 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 C7orf25Q9BPX7 421 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 FDXACB1Q9BRP7 624 aaPredicted RBP17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 TRIM9Q9C026 710 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 CDHR5Q9HBB8 845 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 IFT122Q9HBG6 1241 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 PARVGQ9HBI0 331 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 IL23AQ9NPF7 189 aa17.19■□□□□ 0.34
PRPF38B-202ENST00000370022 NPHP3-ACAD11A0A0J9YXS1 232 aa17.18■□□□□ 0.34
PRPF38B-202ENST00000370022 H0YGN5 161 aa17.18■□□□□ 0.34
PRPF38B-202ENST00000370022 GPR182O15218 404 aa17.18■□□□□ 0.34
PRPF38B-202ENST00000370022 FAM13AO94988 1023 aa17.18■□□□□ 0.34
PRPF38B-202ENST00000370022 SCP2P22307 547 aa17.18■□□□□ 0.34
PRPF38B-202ENST00000370022 PTENP60484 403 aa17.18■□□□□ 0.34
PRPF38B-202ENST00000370022 LPIN1Q14693 890 aa17.18■□□□□ 0.34
PRPF38B-202ENST00000370022 GPNMBQ14956 572 aa17.18■□□□□ 0.34
PRPF38B-202ENST00000370022 DYMQ7RTS9 669 aa17.18■□□□□ 0.34
PRPF38B-202ENST00000370022 APBB2Q92870 758 aa17.18■□□□□ 0.34
PRPF38B-202ENST00000370022 NTPCRQ9BSD7 190 aaKnown RBP17.18■□□□□ 0.34
PRPF38B-202ENST00000370022 C2orf40Q9H1Z8 148 aa17.18■□□□□ 0.34
PRPF38B-202ENST00000370022 PHLPP2Q6ZVD8 1323 aa17.18■□□□□ 0.34
PRPF38B-202ENST00000370022 LRRIQ4A6NIV6 560 aa17.17■□□□□ 0.34
PRPF38B-202ENST00000370022 RPS6KA5O75582 802 aa17.17■□□□□ 0.34
PRPF38B-202ENST00000370022 GHRP10912 638 aa17.17■□□□□ 0.34
PRPF38B-202ENST00000370022 GAP43P17677 238 aa17.17■□□□□ 0.34
PRPF38B-202ENST00000370022 SFPQP23246 707 aaKnown RBP eCLIP17.17■□□□□ 0.34
PRPF38B-202ENST00000370022 SMTNP53814 917 aa17.17■□□□□ 0.34
PRPF38B-202ENST00000370022 MDM2Q00987 491 aaPredicted RBP17.17■□□□□ 0.34
PRPF38B-202ENST00000370022 PLEKHG4Q58EX7 1191 aa17.17■□□□□ 0.34
PRPF38B-202ENST00000370022 CDCA2Q69YH5 1023 aaPredicted RBP17.17■□□□□ 0.34
PRPF38B-202ENST00000370022 ZBTB8OSQ8IWT0 167 aa17.17■□□□□ 0.34
PRPF38B-202ENST00000370022 SLC17A8Q8NDX2 589 aa17.17■□□□□ 0.34
PRPF38B-202ENST00000370022 DEPTORQ8TB45 409 aa17.17■□□□□ 0.34
PRPF38B-202ENST00000370022 TMEM40Q8WWA1 233 aa17.17■□□□□ 0.34
PRPF38B-202ENST00000370022 SPIRE2Q8WWL2 714 aa17.17■□□□□ 0.34
PRPF38B-202ENST00000370022 SEPT8Q92599 483 aa17.17■□□□□ 0.34
PRPF38B-202ENST00000370022 DNAJC19Q96DA6 116 aa17.17■□□□□ 0.34
PRPF38B-202ENST00000370022 PAGE5Q96GU1 130 aa17.17■□□□□ 0.34
PRPF38B-202ENST00000370022 IFIH1Q9BYX4 1025 aaKnown RBP17.17■□□□□ 0.34
PRPF38B-202ENST00000370022 SEL1LQ9UBV2 794 aa17.17■□□□□ 0.34
PRPF38B-202ENST00000370022 H0YCG3 227 aa17.16■□□□□ 0.34
PRPF38B-202ENST00000370022 KINO60870 393 aaKnown RBP17.16■□□□□ 0.34
PRPF38B-202ENST00000370022 ABCD1P33897 745 aa17.16■□□□□ 0.34
PRPF38B-202ENST00000370022 MAGEA10P43363 369 aaPredicted RBP17.16■□□□□ 0.34
PRPF38B-202ENST00000370022 EFNA5P52803 228 aa17.16■□□□□ 0.34
PRPF38B-202ENST00000370022 PEX3P56589 373 aa17.16■□□□□ 0.34
PRPF38B-202ENST00000370022 CACNB1Q02641 598 aaPredicted RBP17.16■□□□□ 0.34
PRPF38B-202ENST00000370022 PAK2Q13177 524 aa17.16■□□□□ 0.34
PRPF38B-202ENST00000370022 CNKSR3Q6P9H4 555 aa17.16■□□□□ 0.34
PRPF38B-202ENST00000370022 PSRC1Q6PGN9 363 aaPredicted RBP17.16■□□□□ 0.34
PRPF38B-202ENST00000370022 DEFB128Q7Z7B8 93 aa17.16■□□□□ 0.34
PRPF38B-202ENST00000370022 CCDC65Q8IXS2 484 aa17.16■□□□□ 0.34
PRPF38B-202ENST00000370022 ELOA2Q8IYF1 753 aaPredicted RBP17.16■□□□□ 0.34
PRPF38B-202ENST00000370022 MYCT1Q8N699 235 aa17.16■□□□□ 0.34
PRPF38B-202ENST00000370022 BSNDQ8WZ55 320 aa17.16■□□□□ 0.34
PRPF38B-202ENST00000370022 STAMQ92783 540 aa17.16■□□□□ 0.34
PRPF38B-202ENST00000370022 LMBRD1Q9NUN5 540 aa17.16■□□□□ 0.34
PRPF38B-202ENST00000370022 HOOK1Q9UJC3 728 aaKnown RBP17.16■□□□□ 0.34
PRPF38B-202ENST00000370022 NOC2LQ9Y3T9 749 aaKnown RBP17.16■□□□□ 0.34
PRPF38B-202ENST00000370022 FRMD3A2A2Y4 597 aa17.15■□□□□ 0.34
PRPF38B-202ENST00000370022 CCDC169A6NNP5 214 aa17.15■□□□□ 0.34
PRPF38B-202ENST00000370022 SFI1A8K8P3 1242 aa17.15■□□□□ 0.34
PRPF38B-202ENST00000370022 NR1I2O75469 434 aa17.15■□□□□ 0.34
PRPF38B-202ENST00000370022 ACTN1P12814 892 aa17.15■□□□□ 0.34
PRPF38B-202ENST00000370022 LIG1P18858 919 aa17.15■□□□□ 0.34
PRPF38B-202ENST00000370022 AFMP43652 599 aa17.15■□□□□ 0.34
PRPF38B-202ENST00000370022 NPTX2P47972 431 aa17.15■□□□□ 0.34
PRPF38B-202ENST00000370022 KCNN1Q92952 543 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms