RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 PPP1R11O60927 126 aaPredicted RBP9.83□□□□□ -0.84
TPM3-213ENST00000368545 PAGE1O75459 146 aa9.83□□□□□ -0.84
TPM3-213ENST00000368545 ZNF202O95125 648 aa9.83□□□□□ -0.84
TPM3-213ENST00000368545 ACPPP15309 386 aa9.83□□□□□ -0.84
TPM3-213ENST00000368545 TARSP26639 723 aaKnown RBP9.83□□□□□ -0.84
TPM3-213ENST00000368545 SYKP43405 635 aa9.83□□□□□ -0.84
TPM3-213ENST00000368545 GRIA4P48058 902 aa9.83□□□□□ -0.84
TPM3-213ENST00000368545 CAMK4Q16566 473 aa9.83□□□□□ -0.84
TPM3-213ENST00000368545 NEK8Q86SG6 692 aa9.83□□□□□ -0.84
TPM3-213ENST00000368545 ALYREFQ86V81 257 aaKnown RBP9.83□□□□□ -0.84
TPM3-213ENST00000368545 SCYL3Q8IZE3 742 aa9.83□□□□□ -0.84
TPM3-213ENST00000368545 SPICE1Q8N0Z3 855 aa9.83□□□□□ -0.84
TPM3-213ENST00000368545 NUP88Q99567 741 aaPredicted RBP9.83□□□□□ -0.84
TPM3-213ENST00000368545 FUCA2Q9BTY2 467 aa9.83□□□□□ -0.84
TPM3-213ENST00000368545 KIAA1683Q9H0B3 1180 aa9.83□□□□□ -0.84
TPM3-213ENST00000368545 AS3MTQ9HBK9 375 aa9.83□□□□□ -0.84
TPM3-213ENST00000368545 FEM1BQ9UK73 627 aa9.83□□□□□ -0.84
TPM3-213ENST00000368545 PCDHA1Q9Y5I3 950 aa9.83□□□□□ -0.84
TPM3-213ENST00000368545 MYH7BA7E2Y1 1941 aa9.82□□□□□ -0.84
TPM3-213ENST00000368545 WDR46O15213 610 aaKnown RBP9.82□□□□□ -0.84
TPM3-213ENST00000368545 PDGFRBP09619 1106 aa9.82□□□□□ -0.84
TPM3-213ENST00000368545 MCM7P33993 719 aa9.82□□□□□ -0.84
TPM3-213ENST00000368545 USP14P54578 494 aa9.82□□□□□ -0.84
TPM3-213ENST00000368545 VGLL4Q14135 290 aa9.82□□□□□ -0.84
TPM3-213ENST00000368545 ZNF174Q15697 407 aa9.82□□□□□ -0.84
TPM3-213ENST00000368545 INF2Q27J81 1249 aa9.82□□□□□ -0.84
TPM3-213ENST00000368545 FAM83BQ5T0W9 1011 aa9.82□□□□□ -0.84
TPM3-213ENST00000368545 FBXW10Q5XX13 1052 aa9.82□□□□□ -0.84
TPM3-213ENST00000368545 FBXO11Q86XK2 927 aa9.82□□□□□ -0.84
TPM3-213ENST00000368545 ELOA2Q8IYF1 753 aaPredicted RBP9.82□□□□□ -0.84
TPM3-213ENST00000368545 OR13H1Q8NG92 308 aa9.82□□□□□ -0.84
TPM3-213ENST00000368545 CLIC6Q96NY7 704 aa9.82□□□□□ -0.84
TPM3-213ENST00000368545 PYM1Q9BRP8 204 aaKnown RBP9.82□□□□□ -0.84
TPM3-213ENST00000368545 TNKS2Q9H2K2 1166 aa9.82□□□□□ -0.84
TPM3-213ENST00000368545 DZANK1Q9NVP4 752 aa9.82□□□□□ -0.84
TPM3-213ENST00000368545 PRR12Q9ULL5 1215 aa9.82□□□□□ -0.84
TPM3-213ENST00000368545 PARP14Q460N5 1801 aa9.82□□□□□ -0.84
TPM3-213ENST00000368545 PDHXO00330 501 aa9.82□□□□□ -0.84
TPM3-213ENST00000368545 TNPO2O14787 897 aaKnown RBP9.82□□□□□ -0.84
TPM3-213ENST00000368545 ADAMTS3O15072 1205 aa9.82□□□□□ -0.84
TPM3-213ENST00000368545 MMP20O60882 483 aa9.82□□□□□ -0.84
TPM3-213ENST00000368545 CAVIN2O95810 425 aa9.82□□□□□ -0.84
TPM3-213ENST00000368545 PRPHP41219 470 aa9.82□□□□□ -0.84
TPM3-213ENST00000368545 FOXC1Q12948 553 aa9.82□□□□□ -0.84
TPM3-213ENST00000368545 NOL9Q5SY16 702 aaKnown RBP9.82□□□□□ -0.84
TPM3-213ENST00000368545 SASS6Q6UVJ0 657 aa9.82□□□□□ -0.84
TPM3-213ENST00000368545 TRIM42Q8IWZ5 723 aa9.82□□□□□ -0.84
TPM3-213ENST00000368545 CCDC34Q96HJ3 373 aa9.82□□□□□ -0.84
TPM3-213ENST00000368545 NECAB3Q96P71 396 aaPredicted RBP9.82□□□□□ -0.84
TPM3-213ENST00000368545 WRNIP1Q96S55 665 aa9.82□□□□□ -0.84
TPM3-213ENST00000368545 NAP1L4Q99733 375 aaKnown RBP9.82□□□□□ -0.84
TPM3-213ENST00000368545 SDF4Q9BRK5 362 aa9.82□□□□□ -0.84
TPM3-213ENST00000368545 CEP44Q9C0F1 390 aa9.82□□□□□ -0.84
TPM3-213ENST00000368545 PSTPIP2Q9H939 334 aa9.82□□□□□ -0.84
TPM3-213ENST00000368545 PICK1Q9NRD5 415 aa9.82□□□□□ -0.84
TPM3-213ENST00000368545 HOOK1Q9UJC3 728 aaKnown RBP9.82□□□□□ -0.84
TPM3-213ENST00000368545 KCNH3Q9ULD8 1083 aa9.82□□□□□ -0.84
TPM3-213ENST00000368545 LOC102724159A0A0B4J2E5 919 aa9.81□□□□□ -0.84
TPM3-213ENST00000368545 LONP1P36776 959 aaKnown RBP9.81□□□□□ -0.84
TPM3-213ENST00000368545 AP3B2Q13367 1082 aa9.81□□□□□ -0.84
TPM3-213ENST00000368545 PWP2Q15269 919 aaKnown RBP9.81□□□□□ -0.84
TPM3-213ENST00000368545 ZYXQ15942 572 aaKnown RBP9.81□□□□□ -0.84
TPM3-213ENST00000368545 KIAA1755Q5JYT7 1200 aa9.81□□□□□ -0.84
TPM3-213ENST00000368545 SNIP1Q8TAD8 396 aaKnown RBP9.81□□□□□ -0.84
TPM3-213ENST00000368545 TBCKQ8TEA7 893 aa9.81□□□□□ -0.84
TPM3-213ENST00000368545 ANP32BQ92688 251 aaKnown RBP9.81□□□□□ -0.84
TPM3-213ENST00000368545 TSEN34Q9BSV6 310 aaKnown RBP9.81□□□□□ -0.84
TPM3-213ENST00000368545 WDR18Q9BV38 432 aa9.81□□□□□ -0.84
TPM3-213ENST00000368545 CSRNP2Q9H175 543 aa9.81□□□□□ -0.84
TPM3-213ENST00000368545 RANBP17Q9H2T7 1088 aaKnown RBP9.81□□□□□ -0.84
TPM3-213ENST00000368545 TMX1Q9H3N1 280 aa9.81□□□□□ -0.84
TPM3-213ENST00000368545 C11orf16Q9NQ32 467 aa9.81□□□□□ -0.84
TPM3-213ENST00000368545 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.81□□□□□ -0.84
TPM3-213ENST00000368545 METTL12A8MUP2 240 aa9.8□□□□□ -0.84
TPM3-213ENST00000368545 NEMFO60524 1076 aa9.8□□□□□ -0.84
TPM3-213ENST00000368545 MSCO60682 206 aa9.8□□□□□ -0.84
TPM3-213ENST00000368545 XRCC6P12956 609 aaKnown RBP eCLIP9.8□□□□□ -0.84
TPM3-213ENST00000368545 GCFC2P16383 781 aaKnown RBP9.8□□□□□ -0.84
TPM3-213ENST00000368545 FLT3LGP49771 235 aa9.8□□□□□ -0.84
TPM3-213ENST00000368545 JAKMIP3Q5VZ66 844 aa9.8□□□□□ -0.84
TPM3-213ENST00000368545 FERD3LQ96RJ6 166 aa9.8□□□□□ -0.84
TPM3-213ENST00000368545 OSMRQ99650 979 aa9.8□□□□□ -0.84
TPM3-213ENST00000368545 RBSNQ9H1K0 784 aa9.8□□□□□ -0.84
TPM3-213ENST00000368545 RAPGEFL1Q9UHV5 662 aa9.8□□□□□ -0.84
TPM3-213ENST00000368545 CPA4Q9UI42 421 aa9.8□□□□□ -0.84
TPM3-213ENST00000368545 A0A1B0GTH6 734 aa9.8□□□□□ -0.84
TPM3-213ENST00000368545 CCNT1O60563 726 aaKnown RBP9.8□□□□□ -0.84
TPM3-213ENST00000368545 PTPRAP18433 802 aa9.8□□□□□ -0.84
TPM3-213ENST00000368545 STX1AQ16623 288 aa9.8□□□□□ -0.84
TPM3-213ENST00000368545 LETM2Q2VYF4 491 aa9.8□□□□□ -0.84
TPM3-213ENST00000368545 UVSSAQ2YD98 709 aa9.8□□□□□ -0.84
TPM3-213ENST00000368545 C4orf32Q8N8J7 132 aa9.8□□□□□ -0.84
TPM3-213ENST00000368545 PRRX2Q99811 253 aa9.8□□□□□ -0.84
TPM3-213ENST00000368545 LRRC3Q9BY71 257 aa9.8□□□□□ -0.84
TPM3-213ENST00000368545 PKD2L1Q9P0L9 805 aa9.8□□□□□ -0.84
TPM3-213ENST00000368545 USP25Q9UHP3 1055 aa9.8□□□□□ -0.84
TPM3-213ENST00000368545 PNMA2Q9UL42 364 aa9.8□□□□□ -0.84
TPM3-213ENST00000368545 VWA3AA6NCI4 1184 aa9.79□□□□□ -0.84
TPM3-213ENST00000368545 C19orf81C9J6K1 198 aa9.79□□□□□ -0.84
TPM3-213ENST00000368545 FOSP01100 380 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms