RNA–Protein interactions for RNA: ENST00000367404.8

NUP43-203, Transcript of nucleoporin 43, humanhuman

TSL 2 BASIC

Gene NUP43, Length 1,089 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-203ENST00000367404 SPOUT1Q5T280 376 aaKnown RBP11.15□□□□□ -0.62
NUP43-203ENST00000367404 CREB3L3Q68CJ9 461 aa11.15□□□□□ -0.62
NUP43-203ENST00000367404 SYCE2Q6PIF2 218 aa11.15□□□□□ -0.62
NUP43-203ENST00000367404 APOA5Q6Q788 366 aa11.15□□□□□ -0.62
NUP43-203ENST00000367404 THNSL1Q8IYQ7 743 aa11.15□□□□□ -0.62
NUP43-203ENST00000367404 MICAL1Q8TDZ2 1067 aa11.15□□□□□ -0.62
NUP43-203ENST00000367404 MRPS27Q92552 414 aaKnown RBP11.15□□□□□ -0.62
NUP43-203ENST00000367404 SPSB2Q99619 263 aa11.15□□□□□ -0.62
NUP43-203ENST00000367404 OSMRQ99650 979 aa11.15□□□□□ -0.62
NUP43-203ENST00000367404 LRRC2Q9BYS8 371 aa11.15□□□□□ -0.62
NUP43-203ENST00000367404 TMEM117Q9H0C3 514 aa11.15□□□□□ -0.62
NUP43-203ENST00000367404 ATP6V0A4Q9HBG4 840 aa11.15□□□□□ -0.62
NUP43-203ENST00000367404 ZNF302Q9NR11 478 aa11.15□□□□□ -0.62
NUP43-203ENST00000367404 RBM28Q9NW13 759 aaKnown RBP11.15□□□□□ -0.62
NUP43-203ENST00000367404 TMEM260Q9NX78 707 aa11.15□□□□□ -0.62
NUP43-203ENST00000367404 BARHL2Q9NY43 387 aa11.15□□□□□ -0.62
NUP43-203ENST00000367404 GINS2Q9Y248 185 aa11.15□□□□□ -0.62
NUP43-203ENST00000367404 KMT2EQ8IZD2 1858 aa11.15□□□□□ -0.63
NUP43-203ENST00000367404 CFAP54Q96N23 3096 aa11.14□□□□□ -0.63
NUP43-203ENST00000367404 FAM86B1E9PN63 330 aa11.14□□□□□ -0.63
NUP43-203ENST00000367404 NRG2O14511 850 aaPredicted RBP11.14□□□□□ -0.63
NUP43-203ENST00000367404 BACH1O14867 736 aa11.14□□□□□ -0.63
NUP43-203ENST00000367404 FAM86B2P0C5J1 330 aa11.14□□□□□ -0.63
NUP43-203ENST00000367404 HOXB8P17481 243 aaPredicted RBP11.14□□□□□ -0.63
NUP43-203ENST00000367404 SLC19A1P41440 591 aa11.14□□□□□ -0.63
NUP43-203ENST00000367404 KIZQ2M2Z5 673 aa11.14□□□□□ -0.63
NUP43-203ENST00000367404 PLPP4Q5VZY2 271 aa11.14□□□□□ -0.63
NUP43-203ENST00000367404 MIS18BP1Q6P0N0 1132 aa11.14□□□□□ -0.63
NUP43-203ENST00000367404 PDXDC2PQ6P474 469 aa11.14□□□□□ -0.63
NUP43-203ENST00000367404 LRRC55Q6ZSA7 311 aa11.14□□□□□ -0.63
NUP43-203ENST00000367404 LINC01465Q8N7H1 131 aa11.14□□□□□ -0.63
NUP43-203ENST00000367404 SNX27Q96L92 541 aa11.14□□□□□ -0.63
NUP43-203ENST00000367404 CASD1Q96PB1 797 aa11.14□□□□□ -0.63
NUP43-203ENST00000367404 TCF25Q9BQ70 676 aa11.14□□□□□ -0.63
NUP43-203ENST00000367404 GLT8D2Q9H1C3 349 aa11.14□□□□□ -0.63
NUP43-203ENST00000367404 NGRNQ9NPE2 291 aaKnown RBP11.14□□□□□ -0.63
NUP43-203ENST00000367404 MAFBQ9Y5Q3 323 aaPredicted RBP11.14□□□□□ -0.63
NUP43-203ENST00000367404 SMCO2A6NFE2 343 aa11.13□□□□□ -0.63
NUP43-203ENST00000367404 HIDE1A8MVS5 230 aa11.13□□□□□ -0.63
NUP43-203ENST00000367404 DDX39AO00148 427 aaKnown RBP11.13□□□□□ -0.63
NUP43-203ENST00000367404 IPO5O00410 1097 aaKnown RBP11.13□□□□□ -0.63
NUP43-203ENST00000367404 HOXA2O43364 376 aa11.13□□□□□ -0.63
NUP43-203ENST00000367404 CYP3A4P08684 503 aa11.13□□□□□ -0.63
NUP43-203ENST00000367404 IBSPP21815 317 aaPredicted RBP11.13□□□□□ -0.63
NUP43-203ENST00000367404 AVPR2P30518 371 aa11.13□□□□□ -0.63
NUP43-203ENST00000367404 PPM1AP35813 382 aa11.13□□□□□ -0.63
NUP43-203ENST00000367404 TECP42680 631 aa11.13□□□□□ -0.63
NUP43-203ENST00000367404 APOBRQ0VD83 1088 aa11.13□□□□□ -0.63
NUP43-203ENST00000367404 ZNF746Q6NUN9 644 aaPredicted RBP11.13□□□□□ -0.63
NUP43-203ENST00000367404 LRRC43Q8N309 656 aa11.13□□□□□ -0.63
NUP43-203ENST00000367404 THAP11Q96EK4 314 aa11.13□□□□□ -0.63
NUP43-203ENST00000367404 ESYT1Q9BSJ8 1104 aa11.13□□□□□ -0.63
NUP43-203ENST00000367404 IRF2BPLQ9H1B7 796 aa11.13□□□□□ -0.63
NUP43-203ENST00000367404 ZDBF2Q9HCK1 2354 aa11.12□□□□□ -0.63
NUP43-203ENST00000367404 PROB1E7EW31 1015 aa11.12□□□□□ -0.63
NUP43-203ENST00000367404 VTNP04004 478 aa11.12□□□□□ -0.63
NUP43-203ENST00000367404 CD46P15529 392 aa11.12□□□□□ -0.63
NUP43-203ENST00000367404 RCAN1P53805 252 aa11.12□□□□□ -0.63
NUP43-203ENST00000367404 SETQ01105 290 aaPredicted RBP11.12□□□□□ -0.63
NUP43-203ENST00000367404 EXOSC10Q01780 885 aaKnown RBP11.12□□□□□ -0.63
NUP43-203ENST00000367404 RTN1Q16799 776 aa11.12□□□□□ -0.63
NUP43-203ENST00000367404 SWSAP1Q6NVH7 229 aa11.12□□□□□ -0.63
NUP43-203ENST00000367404 KCNT2Q6UVM3 1135 aa11.12□□□□□ -0.63
NUP43-203ENST00000367404 SYNE3Q6ZMZ3 975 aa11.12□□□□□ -0.63
NUP43-203ENST00000367404 LIAT1Q6ZQX7 453 aa11.12□□□□□ -0.63
NUP43-203ENST00000367404 PLA2G4DQ86XP0 818 aa11.12□□□□□ -0.63
NUP43-203ENST00000367404 SMAP1Q8IYB5 467 aaPredicted RBP11.12□□□□□ -0.63
NUP43-203ENST00000367404 CASP10Q92851 521 aa11.12□□□□□ -0.63
NUP43-203ENST00000367404 RIPOR3Q96MK2 946 aa11.12□□□□□ -0.63
NUP43-203ENST00000367404 ZNF558Q96NG5 402 aa11.12□□□□□ -0.63
NUP43-203ENST00000367404 PPP1R16BQ96T49 567 aa11.12□□□□□ -0.63
NUP43-203ENST00000367404 ADAMTS10Q9H324 1103 aa11.12□□□□□ -0.63
NUP43-203ENST00000367404 ENTPD7Q9NQZ7 604 aa11.12□□□□□ -0.63
NUP43-203ENST00000367404 FAM217BQ9NTX9 383 aaPredicted RBP11.12□□□□□ -0.63
NUP43-203ENST00000367404 FAM86C1Q9NVL1 165 aa11.12□□□□□ -0.63
NUP43-203ENST00000367404 PUF60Q9UHX1 559 aaKnown RBP11.12□□□□□ -0.63
NUP43-203ENST00000367404 CEP131Q9UPN4 1083 aa11.12□□□□□ -0.63
NUP43-203ENST00000367404 SLC27A5Q9Y2P5 690 aa11.12□□□□□ -0.63
NUP43-203ENST00000367404 FNDC1Q4ZHG4 1894 aaPredicted RBP11.12□□□□□ -0.63
NUP43-203ENST00000367404 KAT6AQ92794 2004 aa11.11□□□□□ -0.63
NUP43-203ENST00000367404 CACNA1HO95180 2353 aa11.11□□□□□ -0.63
NUP43-203ENST00000367404 ESYT2A0FGR8 921 aa11.11□□□□□ -0.63
NUP43-203ENST00000367404 MAGEB2O15479 319 aa11.11□□□□□ -0.63
NUP43-203ENST00000367404 ZBTB43O43298 467 aa11.11□□□□□ -0.63
NUP43-203ENST00000367404 PDGFBP01127 241 aaPredicted RBP11.11□□□□□ -0.63
NUP43-203ENST00000367404 ZNF76P36508 570 aa11.11□□□□□ -0.63
NUP43-203ENST00000367404 PBX3P40426 434 aa11.11□□□□□ -0.63
NUP43-203ENST00000367404 CLCN3P51790 818 aa11.11□□□□□ -0.63
NUP43-203ENST00000367404 CLLU1OSQ5K130 101 aa11.11□□□□□ -0.63
NUP43-203ENST00000367404 LLGL2Q6P1M3 1020 aa11.11□□□□□ -0.63
NUP43-203ENST00000367404 ZNF598Q86UK7 904 aaKnown RBP11.11□□□□□ -0.63
NUP43-203ENST00000367404 ECHDC2Q86YB7 292 aa11.11□□□□□ -0.63
NUP43-203ENST00000367404 UBALD2Q8IYN6 164 aa11.11□□□□□ -0.63
NUP43-203ENST00000367404 SLC39A11Q8N1S5 342 aa11.11□□□□□ -0.63
NUP43-203ENST00000367404 NECTIN4Q96NY8 510 aa11.11□□□□□ -0.63
NUP43-203ENST00000367404 ZNF577Q9BSK1 485 aa11.11□□□□□ -0.63
NUP43-203ENST00000367404 POMKQ9H5K3 350 aa11.11□□□□□ -0.63
NUP43-203ENST00000367404 TBC1D22BQ9NU19 505 aa11.11□□□□□ -0.63
NUP43-203ENST00000367404 BRPF3Q9ULD4 1205 aa11.11□□□□□ -0.63
NUP43-203ENST00000367404 NR2E1Q9Y466 385 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms