RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 TLR3O15455 904 aaKnown RBP12.29□□□□□ -0.44
RD3-201ENST00000367002 PRPSAP2O60256 369 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 GPC4O75487 556 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 EYA4O95677 639 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 KLRC1P26715 233 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 ERVK-24P63145 666 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 KRT39Q6A163 491 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 HVCN1Q96D96 273 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 SAAL1Q96ER3 474 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 CHMP6Q96FZ7 201 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 SH2D3AQ9BRG2 576 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 ZWILCHQ9H900 591 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 IFT122Q9HBG6 1241 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 HPCAL4Q9UM19 191 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 ZBTB22O15209 634 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 MED7O43513 233 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 PLS3P13797 630 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 GARSP41250 739 aaKnown RBP12.28□□□□□ -0.44
RD3-201ENST00000367002 ACTN3Q08043 901 aaPredicted RBP12.28□□□□□ -0.44
RD3-201ENST00000367002 CEP55Q53EZ4 464 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 FBXO33Q7Z6M2 555 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 SEPT12Q8IYM1 358 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 DNAAF3Q8N9W5 541 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 ERGIC2Q96RQ1 377 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 PNKPQ96T60 521 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 SMYD2Q9NRG4 433 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 PDS5AQ29RF7 1337 aaKnown RBP12.28□□□□□ -0.44
RD3-201ENST00000367002 CEP170BQ9Y4F5 1589 aaPredicted RBP12.28□□□□□ -0.44
RD3-201ENST00000367002 CLDN3O15551 220 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 TTI1O43156 1089 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 PPM1FP49593 454 aaPredicted RBP12.28□□□□□ -0.44
RD3-201ENST00000367002 IFRD2Q12894 506 aaPredicted RBP12.28□□□□□ -0.44
RD3-201ENST00000367002 NBPF9Q3BBW0 867 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 HAUS6Q7Z4H7 955 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 SULF1Q8IWU6 871 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 NLRP4Q96MN2 994 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 DAGLAQ9Y4D2 1042 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 ABCB11O95342 1321 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 FLT1P17948 1338 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 A0A0G2JND7 137 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 PSMA2P25787 234 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 IRAK1P51617 712 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 PCGF5Q86SE9 256 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 C1orf54Q8WWF1 131 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 RAVER2Q9HCJ3 691 aaKnown RBP12.28□□□□□ -0.44
RD3-201ENST00000367002 CAMSAP1Q5T5Y3 1602 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 C21orf2O43822 256 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 NTSR2O95665 410 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 ZBED1O96006 694 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 PLEKP08567 350 aaPredicted RBP12.28□□□□□ -0.44
RD3-201ENST00000367002 PDHBP11177 359 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 JAK3P52333 1124 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 GABPAQ06546 454 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 DBN1Q16643 649 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 SH2D4BQ5SQS7 431 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 HP1BP3Q5SSJ5 553 aaPredicted RBP12.28□□□□□ -0.44
RD3-201ENST00000367002 RBM41Q96IZ5 413 aaKnown RBP12.28□□□□□ -0.44
RD3-201ENST00000367002 CCT8L2Q96SF2 557 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 DDX23Q9BUQ8 820 aaKnown RBP12.28□□□□□ -0.44
RD3-201ENST00000367002 ZNF277Q9NRM2 450 aaPredicted RBP12.28□□□□□ -0.44
RD3-201ENST00000367002 FHOD1Q9Y613 1164 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 DUSP10Q9Y6W6 482 aa12.28□□□□□ -0.44
RD3-201ENST00000367002 MEFVO15553 781 aaPredicted RBP12.27□□□□□ -0.44
RD3-201ENST00000367002 LDHAP00338 332 aaKnown RBP12.27□□□□□ -0.44
RD3-201ENST00000367002 GSTA1P08263 222 aa12.27□□□□□ -0.44
RD3-201ENST00000367002 GSTA2P09210 222 aa12.27□□□□□ -0.44
RD3-201ENST00000367002 MDH1P40925 334 aaKnown RBP12.27□□□□□ -0.44
RD3-201ENST00000367002 FAM47CQ5HY64 1035 aa12.27□□□□□ -0.44
RD3-201ENST00000367002 ANKS1AQ92625 1134 aa12.27□□□□□ -0.44
RD3-201ENST00000367002 TTC17Q96AE7 1141 aa12.27□□□□□ -0.44
RD3-201ENST00000367002 LACRTQ9GZZ8 138 aa12.27□□□□□ -0.44
RD3-201ENST00000367002 GOLPH3Q9H4A6 298 aa12.27□□□□□ -0.44
RD3-201ENST00000367002 NOP53Q9NZM5 478 aaKnown RBP12.27□□□□□ -0.44
RD3-201ENST00000367002 L1RE1Q9UN81 338 aa12.27□□□□□ -0.44
RD3-201ENST00000367002 PFASO15067 1338 aa12.27□□□□□ -0.44
RD3-201ENST00000367002 COL3A1P02461 1466 aaPredicted RBP12.27□□□□□ -0.44
RD3-201ENST00000367002 H0Y3Z8 333 aa12.27□□□□□ -0.45
RD3-201ENST00000367002 TOM1L1O75674 476 aa12.27□□□□□ -0.45
RD3-201ENST00000367002 ARL4AP40617 200 aa12.27□□□□□ -0.45
RD3-201ENST00000367002 ECE1P42892 770 aa12.27□□□□□ -0.45
RD3-201ENST00000367002 CDO1Q16878 200 aa12.27□□□□□ -0.45
RD3-201ENST00000367002 RAPH1Q70E73 1250 aa12.27□□□□□ -0.45
RD3-201ENST00000367002 EPM2AIP1Q7L775 607 aaPredicted RBP12.27□□□□□ -0.45
RD3-201ENST00000367002 KRT27Q7Z3Y8 459 aa12.27□□□□□ -0.45
RD3-201ENST00000367002 REEP2Q9BRK0 252 aa12.27□□□□□ -0.45
RD3-201ENST00000367002 KIAA1586Q9HCI6 787 aa12.27□□□□□ -0.45
RD3-201ENST00000367002 PLEKHG2Q9H7P9 1386 aa12.27□□□□□ -0.45
RD3-201ENST00000367002 GOLGA8MH3BSY2 632 aa12.27□□□□□ -0.45
RD3-201ENST00000367002 EIF3HO15372 352 aaKnown RBP eCLIP12.27□□□□□ -0.45
RD3-201ENST00000367002 MARK3P27448 753 aa12.27□□□□□ -0.45
RD3-201ENST00000367002 BAG6P46379 1132 aa12.27□□□□□ -0.45
RD3-201ENST00000367002 KRT76Q01546 638 aa12.27□□□□□ -0.45
RD3-201ENST00000367002 EDRF1Q3B7T1 1238 aa12.27□□□□□ -0.45
RD3-201ENST00000367002 CCDC93Q567U6 631 aa12.27□□□□□ -0.45
RD3-201ENST00000367002 RPAINQ86UA6 219 aa12.27□□□□□ -0.45
RD3-201ENST00000367002 HEXIM2Q96MH2 286 aaKnown RBP12.27□□□□□ -0.45
RD3-201ENST00000367002 MAGED2Q9UNF1 606 aaPredicted RBP12.27□□□□□ -0.45
RD3-201ENST00000367002 BYSLQ13895 437 aaKnown RBP12.26□□□□□ -0.45
RD3-201ENST00000367002 DHX34Q14147 1143 aaKnown RBP12.26□□□□□ -0.45
RD3-201ENST00000367002 EPHA7Q15375 998 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms