RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 LPAR1Q92633 364 aa12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 WDR46O15213 610 aaKnown RBP12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 ZNF710Q8N1W2 664 aa12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 STK33Q9BYT3 514 aa12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 ESRRAP11474 423 aaPredicted RBP12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 MDM2Q00987 491 aaPredicted RBP12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 SCG3Q8WXD2 468 aaKnown RBP12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 PSD3Q9NYI0 1048 aa12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 DCCP43146 1447 aa12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 EIF3DO15371 548 aaKnown RBP eCLIP12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 SERPINB4P48594 390 aa12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 VAMP7P51809 220 aa12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 NR1I3Q14994 352 aa12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 FBXL16Q8N461 479 aa12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 PHF20Q9BVI0 1012 aa12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 CNOT8Q9UFF9 292 aaKnown RBP12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 CPSF3Q9UKF6 684 aaKnown RBP12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 SMG5Q9UPR3 1016 aaKnown RBP12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 KPNA7A9QM74 516 aa12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 ZMYND10O75800 440 aa12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 EYA4O95677 639 aa12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 SESN3P58005 492 aa12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 AP1ARQ63HQ0 302 aa12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 SLC16A2P36021 539 aa12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 TRMT10CQ7L0Y3 403 aaKnown RBP12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 TRAIPQ9BWF2 469 aa12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 CD209Q9NNX6 404 aa12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 CYP2D7A0A087X1C5 515 aa12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 PSMD14O00487 310 aa12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 GGCXP38435 758 aa12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 THOC5Q13769 683 aaKnown RBP12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 ZKSCAN8Q15776 578 aaPredicted RBP12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 HLFQ16534 295 aa12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 POTEMA6NI47 508 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 ACSL3O95573 720 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 SRGNP10124 158 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 CDC25AP30304 524 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 ZNF699Q32M78 642 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 SPATA4Q8NEY3 305 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 NUP85Q9BW27 656 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 C1orf167Q5SNV9 1468 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 PLS3P13797 630 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 MX2P20592 715 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 STAT3P40763 770 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 PPWD1Q96BP3 646 aaKnown RBP12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 MYO1CO00159 1063 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 DPYDQ12882 1025 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 PDCD2Q16342 344 aaPredicted RBP12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 NUGGCQ68CJ6 796 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 SFR1Q86XK3 245 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 FBXL13Q8NEE6 735 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 ZNF564Q8TBZ8 553 aaPredicted RBP12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 STXBP2Q15833 593 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 CEP55Q53EZ4 464 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 APOBEC3FQ8IUX4 373 aaKnown RBP12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 PRPF38AQ8NAV1 312 aaKnown RBP12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 IGDCC4Q8TDY8 1250 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 FAM149B1Q96BN6 582 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 UIMC1Q96RL1 719 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 STAP1Q9ULZ2 295 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 ZNF341Q9BYN7 854 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 PLEKHA4Q9H4M7 779 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 CTIFO43310 598 aaKnown RBP12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 SPAG6O75602 509 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 DEPDC1BQ8WUY9 529 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 FRMD8Q9BZ67 464 aaPredicted RBP12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 CEP170BQ9Y4F5 1589 aaPredicted RBP12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 CDC27P30260 824 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 CYP2C19P33261 490 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 CRKP46108 304 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 STAT4Q14765 748 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 C12orf60Q5U649 245 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 SP8Q8IXZ3 490 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 COPEO14579 308 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 GDF11O95390 407 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 ST13P4Q8IZP2 240 aaPredicted RBP12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 GINM1Q9NU53 330 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 WDR35Q9P2L0 1181 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 DTNBO60941 627 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 ART3Q13508 389 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 PDXDC1Q6P996 788 aa12.84□□□□□ -0.35
CDC42BPA-203ENST00000366766 MEIS1O00470 390 aa12.83□□□□□ -0.35
CDC42BPA-203ENST00000366766 ITPRIPL1Q6GPH6 555 aa12.83□□□□□ -0.35
CDC42BPA-203ENST00000366766 ABI1Q8IZP0 508 aa12.83□□□□□ -0.35
CDC42BPA-203ENST00000366766 STILQ15468 1287 aa12.83□□□□□ -0.36
CDC42BPA-203ENST00000366766 CATSPER1Q8NEC5 780 aa12.83□□□□□ -0.36
CDC42BPA-203ENST00000366766 CHMP6Q96FZ7 201 aa12.83□□□□□ -0.36
CDC42BPA-203ENST00000366766 GOLGA8SH3BPF8 625 aa12.83□□□□□ -0.36
CDC42BPA-203ENST00000366766 RTN2O75298 545 aa12.83□□□□□ -0.36
CDC42BPA-203ENST00000366766 GH2P01242 217 aa12.83□□□□□ -0.36
CDC42BPA-203ENST00000366766 GOLGA8FQ08AF8 430 aa12.83□□□□□ -0.36
CDC42BPA-203ENST00000366766 GOLGA8DPQ0D2H9 430 aa12.83□□□□□ -0.36
CDC42BPA-203ENST00000366766 KRT27Q7Z3Y8 459 aa12.83□□□□□ -0.36
CDC42BPA-203ENST00000366766 ADSSL1Q8N142 457 aa12.83□□□□□ -0.36
CDC42BPA-203ENST00000366766 PPP1R12AO14974 1030 aaPredicted RBP12.83□□□□□ -0.36
CDC42BPA-203ENST00000366766 MMP14P50281 582 aa12.83□□□□□ -0.36
CDC42BPA-203ENST00000366766 SF3B3Q15393 1217 aaKnown RBP12.83□□□□□ -0.36
CDC42BPA-203ENST00000366766 RIBC1Q8N443 379 aaPredicted RBP12.83□□□□□ -0.36
CDC42BPA-203ENST00000366766 PARVAQ9NVD7 372 aa12.83□□□□□ -0.36
CDC42BPA-203ENST00000366766 ITKQ08881 620 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms