RNA–Protein interactions for RNA: ENST00000363904.1

RNU6-478P-201, Transcript of RNA, U6 small nuclear 478, pseudogene, humanhuman

BASIC

Gene RNU6-478P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-478P-201ENST00000363904 SEZ6Q53EL9 994 aa0.92□□□□□ -2.26
RNU6-478P-201ENST00000363904 CUZD1Q86UP6 607 aa0.92□□□□□ -2.26
RNU6-478P-201ENST00000363904 NR2C2APQ86WQ0 139 aa0.92□□□□□ -2.26
RNU6-478P-201ENST00000363904 PLXDC1Q8IUK5 500 aa0.92□□□□□ -2.26
RNU6-478P-201ENST00000363904 SYT12Q8IV01 421 aa0.92□□□□□ -2.26
RNU6-478P-201ENST00000363904 RBM12BQ8IXT5 1001 aaKnown RBP0.92□□□□□ -2.26
RNU6-478P-201ENST00000363904 ANKRD53Q8N9V6 530 aa0.92□□□□□ -2.26
RNU6-478P-201ENST00000363904 GOLM1Q8NBJ4 401 aa0.92□□□□□ -2.26
RNU6-478P-201ENST00000363904 GCDHQ92947 438 aaPredicted RBP0.92□□□□□ -2.26
RNU6-478P-201ENST00000363904 SARAFQ96BY9 339 aa0.92□□□□□ -2.26
RNU6-478P-201ENST00000363904 LMLNQ96KR4 655 aa0.92□□□□□ -2.26
RNU6-478P-201ENST00000363904 Q96MF0 132 aa0.92□□□□□ -2.26
RNU6-478P-201ENST00000363904 VPS16Q9H269 839 aa0.92□□□□□ -2.26
RNU6-478P-201ENST00000363904 CLDND1Q9NY35 253 aa0.92□□□□□ -2.26
RNU6-478P-201ENST00000363904 WWC3Q9ULE0 1092 aa0.92□□□□□ -2.26
RNU6-478P-201ENST00000363904 TP53BP1Q12888 1972 aaPredicted RBP0.92□□□□□ -2.26
RNU6-478P-201ENST00000363904 SOCS2O14508 198 aa0.91□□□□□ -2.26
RNU6-478P-201ENST00000363904 BRINP1O60477 761 aa0.91□□□□□ -2.26
RNU6-478P-201ENST00000363904 CBFA2T3O75081 653 aa0.91□□□□□ -2.26
RNU6-478P-201ENST00000363904 PPM1BO75688 479 aa0.91□□□□□ -2.26
RNU6-478P-201ENST00000363904 SPDEFO95238 335 aa0.91□□□□□ -2.26
RNU6-478P-201ENST00000363904 SERPINB4P48594 390 aa0.91□□□□□ -2.26
RNU6-478P-201ENST00000363904 JAM2P57087 298 aa0.91□□□□□ -2.26
RNU6-478P-201ENST00000363904 KRTAP12-2P59991 146 aa0.91□□□□□ -2.26
RNU6-478P-201ENST00000363904 FAM160A1Q05DH4 1040 aa0.91□□□□□ -2.26
RNU6-478P-201ENST00000363904 DSC3Q14574 896 aa0.91□□□□□ -2.26
RNU6-478P-201ENST00000363904 ZNF585BQ52M93 769 aa0.91□□□□□ -2.26
RNU6-478P-201ENST00000363904 KIAA0825Q8IV33 1275 aa0.91□□□□□ -2.26
RNU6-478P-201ENST00000363904 ZBTB38Q8NAP3 1195 aaPredicted RBP0.91□□□□□ -2.26
RNU6-478P-201ENST00000363904 TAF15Q92804 592 aaKnown RBP eCLIP0.91□□□□□ -2.26
RNU6-478P-201ENST00000363904 DIO2Q92813 273 aa0.91□□□□□ -2.26
RNU6-478P-201ENST00000363904 PBXIP1Q96AQ6 731 aa0.91□□□□□ -2.26
RNU6-478P-201ENST00000363904 SLC7A6OSQ96CW6 309 aaPredicted RBP0.91□□□□□ -2.26
RNU6-478P-201ENST00000363904 PDLIM2Q96JY6 352 aa0.91□□□□□ -2.26
RNU6-478P-201ENST00000363904 FRMD6Q96NE9 622 aa0.91□□□□□ -2.26
RNU6-478P-201ENST00000363904 GPHA2Q96T91 129 aa0.91□□□□□ -2.26
RNU6-478P-201ENST00000363904 TMEM79Q9BSE2 394 aa0.91□□□□□ -2.26
RNU6-478P-201ENST00000363904 DKK2Q9UBU2 259 aa0.91□□□□□ -2.26
RNU6-478P-201ENST00000363904 CGGBP1Q9UFW8 167 aaPredicted RBP0.91□□□□□ -2.26
RNU6-478P-201ENST00000363904 WNT6Q9Y6F9 365 aa0.91□□□□□ -2.26
RNU6-478P-201ENST00000363904 LINC01548A6NM66 108 aa0.9□□□□□ -2.27
RNU6-478P-201ENST00000363904 C4orf47A7E2U8 309 aa0.9□□□□□ -2.27
RNU6-478P-201ENST00000363904 ORC4O43929 436 aa0.9□□□□□ -2.27
RNU6-478P-201ENST00000363904 PLGP00747 810 aaPredicted RBP0.9□□□□□ -2.27
RNU6-478P-201ENST00000363904 LTFP02788 710 aa0.9□□□□□ -2.27
RNU6-478P-201ENST00000363904 CERS1P27544 350 aa0.9□□□□□ -2.27
RNU6-478P-201ENST00000363904 PTTG1IPP53801 180 aa0.9□□□□□ -2.27
RNU6-478P-201ENST00000363904 ST5P78524 1137 aa0.9□□□□□ -2.27
RNU6-478P-201ENST00000363904 LSAMPQ13449 338 aa0.9□□□□□ -2.27
RNU6-478P-201ENST00000363904 KRT40Q6A162 431 aa0.9□□□□□ -2.27
RNU6-478P-201ENST00000363904 KRTAP5-7Q6L8G8 165 aa0.9□□□□□ -2.27
RNU6-478P-201ENST00000363904 APBB1IPQ7Z5R6 666 aaPredicted RBP0.9□□□□□ -2.27
RNU6-478P-201ENST00000363904 PIP4K2CQ8TBX8 421 aa0.9□□□□□ -2.27
RNU6-478P-201ENST00000363904 WFIKKN2Q8TEU8 576 aa0.9□□□□□ -2.27
RNU6-478P-201ENST00000363904 COPS5Q92905 334 aa0.9□□□□□ -2.27
RNU6-478P-201ENST00000363904 NDC1Q9BTX1 674 aa0.9□□□□□ -2.27
RNU6-478P-201ENST00000363904 NOC4LQ9BVI4 516 aaKnown RBP0.9□□□□□ -2.27
RNU6-478P-201ENST00000363904 EHMT1Q9H9B1 1298 aa0.9□□□□□ -2.27
RNU6-478P-201ENST00000363904 SLC6A20Q9NP91 592 aa0.9□□□□□ -2.27
RNU6-478P-201ENST00000363904 GJB4Q9NTQ9 266 aa0.9□□□□□ -2.27
RNU6-478P-201ENST00000363904 NCDNQ9UBB6 729 aa0.9□□□□□ -2.27
RNU6-478P-201ENST00000363904 EFR3BQ9Y2G0 817 aa0.9□□□□□ -2.27
RNU6-478P-201ENST00000363904 CTDP1Q9Y5B0 961 aaPredicted RBP0.9□□□□□ -2.27
RNU6-478P-201ENST00000363904 RBM8AQ9Y5S9 174 aaKnown RBP0.9□□□□□ -2.27
RNU6-478P-201ENST00000363904 TREHO43280 583 aa0.89□□□□□ -2.27
RNU6-478P-201ENST00000363904 CBFA2T2O43439 604 aa0.89□□□□□ -2.27
RNU6-478P-201ENST00000363904 H2AFYO75367 372 aaKnown RBP0.89□□□□□ -2.27
RNU6-478P-201ENST00000363904 FOSP01100 380 aaPredicted RBP0.89□□□□□ -2.27
RNU6-478P-201ENST00000363904 SPATA31D3P0C874 917 aa0.89□□□□□ -2.27
RNU6-478P-201ENST00000363904 MPGP29372 298 aa0.89□□□□□ -2.27
RNU6-478P-201ENST00000363904 GBP2P32456 591 aaPredicted RBP0.89□□□□□ -2.27
RNU6-478P-201ENST00000363904 SESN2P58004 480 aaPredicted RBP0.89□□□□□ -2.27
RNU6-478P-201ENST00000363904 CD83Q01151 205 aa0.89□□□□□ -2.27
RNU6-478P-201ENST00000363904 DBPQ10586 325 aaPredicted RBP0.89□□□□□ -2.27
RNU6-478P-201ENST00000363904 RESTQ13127 1097 aa0.89□□□□□ -2.27
RNU6-478P-201ENST00000363904 LCE3EQ5T5B0 92 aa0.89□□□□□ -2.27
RNU6-478P-201ENST00000363904 INTS3Q68E01 1043 aaKnown RBP0.89□□□□□ -2.27
RNU6-478P-201ENST00000363904 TMEM200BQ69YZ2 307 aa0.89□□□□□ -2.27
RNU6-478P-201ENST00000363904 PHLDB3Q6NSJ2 640 aa0.89□□□□□ -2.27
RNU6-478P-201ENST00000363904 SLC18B1Q6NT16 456 aa0.89□□□□□ -2.27
RNU6-478P-201ENST00000363904 SLC2A7Q6PXP3 512 aa0.89□□□□□ -2.27
RNU6-478P-201ENST00000363904 GK5Q6ZS86 529 aa0.89□□□□□ -2.27
RNU6-478P-201ENST00000363904 FAM196AQ6ZSG2 479 aa0.89□□□□□ -2.27
RNU6-478P-201ENST00000363904 SPATA31D4Q6ZUB0 917 aa0.89□□□□□ -2.27
RNU6-478P-201ENST00000363904 IRF2BP2Q7Z5L9 587 aa0.89□□□□□ -2.27
RNU6-478P-201ENST00000363904 PNPLA5Q7Z6Z6 429 aaPredicted RBP0.89□□□□□ -2.27
RNU6-478P-201ENST00000363904 RELL1Q8IUW5 271 aa0.89□□□□□ -2.27
RNU6-478P-201ENST00000363904 TIMP4Q99727 224 aa0.89□□□□□ -2.27
RNU6-478P-201ENST00000363904 CPPED1Q9BRF8 314 aaPredicted RBP0.89□□□□□ -2.27
RNU6-478P-201ENST00000363904 HAPLN2Q9GZV7 340 aa0.89□□□□□ -2.27
RNU6-478P-201ENST00000363904 EPC1Q9H2F5 836 aa0.89□□□□□ -2.27
RNU6-478P-201ENST00000363904 CASS4Q9NQ75 786 aa0.89□□□□□ -2.27
RNU6-478P-201ENST00000363904 FBXL7Q9UJT9 491 aa0.89□□□□□ -2.27
RNU6-478P-201ENST00000363904 SUGT1Q9Y2Z0 365 aa0.89□□□□□ -2.27
RNU6-478P-201ENST00000363904 PCDHA2Q9Y5H9 948 aa0.89□□□□□ -2.27
RNU6-478P-201ENST00000363904 KLF2Q9Y5W3 355 aaPredicted RBP0.89□□□□□ -2.27
RNU6-478P-201ENST00000363904 AOX1Q06278 1338 aa0.89□□□□□ -2.27
RNU6-478P-201ENST00000363904 CD8B2A6NJW9 211 aa0.88□□□□□ -2.27
RNU6-478P-201ENST00000363904 MEIS3P2A8K0S8 358 aa0.88□□□□□ -2.27
RNU6-478P-201ENST00000363904 RTL8CO15255 209 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms