RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 TSHZ1Q6ZSZ6 1077 aa15.3■□□□□ 0.04
NSMCE1-201ENST00000361439 RNF149Q8NC42 400 aa15.3■□□□□ 0.04
NSMCE1-201ENST00000361439 CNNM3Q8NE01 707 aa15.3■□□□□ 0.04
NSMCE1-201ENST00000361439 SPIRE2Q8WWL2 714 aa15.3■□□□□ 0.04
NSMCE1-201ENST00000361439 NLRP7Q8WX94 980 aa15.3■□□□□ 0.04
NSMCE1-201ENST00000361439 DDX12PQ92771 950 aa15.3■□□□□ 0.04
NSMCE1-201ENST00000361439 C7orf25Q9BPX7 421 aa15.3■□□□□ 0.04
NSMCE1-201ENST00000361439 REEP2Q9BRK0 252 aa15.3■□□□□ 0.04
NSMCE1-201ENST00000361439 TRIM9Q9C026 710 aa15.3■□□□□ 0.04
NSMCE1-201ENST00000361439 C2orf40Q9H1Z8 148 aa15.3■□□□□ 0.04
NSMCE1-201ENST00000361439 IFT122Q9HBG6 1241 aa15.3■□□□□ 0.04
NSMCE1-201ENST00000361439 PARVGQ9HBI0 331 aa15.3■□□□□ 0.04
NSMCE1-201ENST00000361439 SEL1LQ9UBV2 794 aa15.3■□□□□ 0.04
NSMCE1-201ENST00000361439 HOOK1Q9UJC3 728 aaKnown RBP15.3■□□□□ 0.04
NSMCE1-201ENST00000361439 ZMYND8Q9ULU4 1186 aaPredicted RBP15.3■□□□□ 0.04
NSMCE1-201ENST00000361439 FRMD3A2A2Y4 597 aa15.29■□□□□ 0.04
NSMCE1-201ENST00000361439 MYMKA6NI61 221 aa15.29■□□□□ 0.04
NSMCE1-201ENST00000361439 GPR182O15218 404 aa15.29■□□□□ 0.04
NSMCE1-201ENST00000361439 TBCAO75347 108 aaKnown RBP15.29■□□□□ 0.04
NSMCE1-201ENST00000361439 CTSHP09668 335 aa15.29■□□□□ 0.04
NSMCE1-201ENST00000361439 DARSP14868 501 aaKnown RBP15.29■□□□□ 0.04
NSMCE1-201ENST00000361439 GAP43P17677 238 aa15.29■□□□□ 0.04
NSMCE1-201ENST00000361439 SFPQP23246 707 aaKnown RBP eCLIP15.29■□□□□ 0.04
NSMCE1-201ENST00000361439 EFNA5P52803 228 aa15.29■□□□□ 0.04
NSMCE1-201ENST00000361439 CCL23P55773 120 aa15.29■□□□□ 0.04
NSMCE1-201ENST00000361439 PTENP60484 403 aa15.29■□□□□ 0.04
NSMCE1-201ENST00000361439 CDCA2Q69YH5 1023 aaPredicted RBP15.29■□□□□ 0.04
NSMCE1-201ENST00000361439 DAW1Q8N136 415 aa15.29■□□□□ 0.04
NSMCE1-201ENST00000361439 ASAP3Q8TDY4 903 aa15.29■□□□□ 0.04
NSMCE1-201ENST00000361439 BADQ92934 168 aa15.29■□□□□ 0.04
NSMCE1-201ENST00000361439 DNAJC19Q96DA6 116 aa15.29■□□□□ 0.04
NSMCE1-201ENST00000361439 PAGE5Q96GU1 130 aa15.29■□□□□ 0.04
NSMCE1-201ENST00000361439 SCLT1Q96NL6 688 aa15.29■□□□□ 0.04
NSMCE1-201ENST00000361439 IL23AQ9NPF7 189 aa15.29■□□□□ 0.04
NSMCE1-201ENST00000361439 GPRC5CQ9NQ84 441 aa15.29■□□□□ 0.04
NSMCE1-201ENST00000361439 SERTAD1Q9UHV2 236 aa15.29■□□□□ 0.04
NSMCE1-201ENST00000361439 PDE4DIPQ5VU43 2346 aa15.29■□□□□ 0.04
NSMCE1-201ENST00000361439 EVPLQ92817 2033 aa15.29■□□□□ 0.04
NSMCE1-201ENST00000361439 A0A087WZ62 844 aa15.28■□□□□ 0.04
NSMCE1-201ENST00000361439 PVALEFA0A1B0GWK0 134 aa15.28■□□□□ 0.04
NSMCE1-201ENST00000361439 NBNO60934 754 aa15.28■□□□□ 0.04
NSMCE1-201ENST00000361439 EFCAB14O75071 495 aa15.28■□□□□ 0.04
NSMCE1-201ENST00000361439 GADD45BO75293 160 aaPredicted RBP15.28■□□□□ 0.04
NSMCE1-201ENST00000361439 RPS6KA5O75582 802 aa15.28■□□□□ 0.04
NSMCE1-201ENST00000361439 FAM13AO94988 1023 aa15.28■□□□□ 0.04
NSMCE1-201ENST00000361439 SRGAP2CP0DJJ0 459 aa15.28■□□□□ 0.04
NSMCE1-201ENST00000361439 MAPTP10636 758 aaKnown RBP15.28■□□□□ 0.04
NSMCE1-201ENST00000361439 CSF2RAP15509 400 aa15.28■□□□□ 0.04
NSMCE1-201ENST00000361439 SYN1P17600 705 aa15.28■□□□□ 0.04
NSMCE1-201ENST00000361439 TMEM62Q0P6H9 643 aa15.28■□□□□ 0.04
NSMCE1-201ENST00000361439 CAPSQ13938 189 aa15.28■□□□□ 0.04
NSMCE1-201ENST00000361439 LPIN1Q14693 890 aa15.28■□□□□ 0.04
NSMCE1-201ENST00000361439 MBTPS1Q14703 1052 aa15.28■□□□□ 0.04
NSMCE1-201ENST00000361439 PLEKHG4Q58EX7 1191 aa15.28■□□□□ 0.04
NSMCE1-201ENST00000361439 PSRC1Q6PGN9 363 aaPredicted RBP15.28■□□□□ 0.04
NSMCE1-201ENST00000361439 MAEAQ7L5Y9 396 aa15.28■□□□□ 0.04
NSMCE1-201ENST00000361439 ZBTB8OSQ8IWT0 167 aa15.28■□□□□ 0.04
NSMCE1-201ENST00000361439 SEPT8Q92599 483 aa15.28■□□□□ 0.04
NSMCE1-201ENST00000361439 SCLYQ96I15 445 aa15.28■□□□□ 0.04
NSMCE1-201ENST00000361439 NLRP4Q96MN2 994 aa15.28■□□□□ 0.04
NSMCE1-201ENST00000361439 OSMRQ99650 979 aa15.28■□□□□ 0.04
NSMCE1-201ENST00000361439 FDXACB1Q9BRP7 624 aaPredicted RBP15.28■□□□□ 0.04
NSMCE1-201ENST00000361439 FTHL17Q9BXU8 183 aa15.28■□□□□ 0.04
NSMCE1-201ENST00000361439 LMBRD1Q9NUN5 540 aa15.28■□□□□ 0.04
NSMCE1-201ENST00000361439 CEP290O15078 2479 aa15.28■□□□□ 0.04
NSMCE1-201ENST00000361439 KINO60870 393 aaKnown RBP15.27■□□□□ 0.04
NSMCE1-201ENST00000361439 PTMSP20962 102 aa15.27■□□□□ 0.04
NSMCE1-201ENST00000361439 NPTX2P47972 431 aa15.27■□□□□ 0.04
NSMCE1-201ENST00000361439 GPNMBQ14956 572 aa15.27■□□□□ 0.04
NSMCE1-201ENST00000361439 CNKSR3Q6P9H4 555 aa15.27■□□□□ 0.04
NSMCE1-201ENST00000361439 KSR1Q8IVT5 923 aa15.27■□□□□ 0.04
NSMCE1-201ENST00000361439 CCDC65Q8IXS2 484 aa15.27■□□□□ 0.04
NSMCE1-201ENST00000361439 PRIMPOLQ96LW4 560 aa15.27■□□□□ 0.04
NSMCE1-201ENST00000361439 IFIH1Q9BYX4 1025 aaKnown RBP15.27■□□□□ 0.04
NSMCE1-201ENST00000361439 ST6GALNAC4Q9H4F1 302 aa15.27■□□□□ 0.04
NSMCE1-201ENST00000361439 TMEM134Q9H6X4 195 aa15.27■□□□□ 0.04
NSMCE1-201ENST00000361439 CDHR5Q9HBB8 845 aa15.27■□□□□ 0.04
NSMCE1-201ENST00000361439 CHST12Q9NRB3 414 aa15.27■□□□□ 0.04
NSMCE1-201ENST00000361439 OLFML3Q9NRN5 406 aa15.27■□□□□ 0.04
NSMCE1-201ENST00000361439 ARHGAP28Q9P2N2 729 aa15.27■□□□□ 0.04
NSMCE1-201ENST00000361439 GINS2Q9Y248 185 aa15.27■□□□□ 0.04
NSMCE1-201ENST00000361439 TANC1Q9C0D5 1861 aa15.27■□□□□ 0.03
NSMCE1-201ENST00000361439 NPHP3-ACAD11A0A0J9YXS1 232 aa15.26■□□□□ 0.03
NSMCE1-201ENST00000361439 LRRIQ4A6NIV6 560 aa15.26■□□□□ 0.03
NSMCE1-201ENST00000361439 H0YGN5 161 aa15.26■□□□□ 0.03
NSMCE1-201ENST00000361439 GTPBP6O43824 516 aaPredicted RBP15.26■□□□□ 0.03
NSMCE1-201ENST00000361439 NR1I2O75469 434 aa15.26■□□□□ 0.03
NSMCE1-201ENST00000361439 BAIAP3O94812 1187 aa15.26■□□□□ 0.03
NSMCE1-201ENST00000361439 GHRP10912 638 aa15.26■□□□□ 0.03
NSMCE1-201ENST00000361439 ACTN1P12814 892 aa15.26■□□□□ 0.03
NSMCE1-201ENST00000361439 AXLP30530 894 aa15.26■□□□□ 0.03
NSMCE1-201ENST00000361439 BMP8BP34820 402 aa15.26■□□□□ 0.03
NSMCE1-201ENST00000361439 MAGEA10P43363 369 aaPredicted RBP15.26■□□□□ 0.03
NSMCE1-201ENST00000361439 PEX3P56589 373 aa15.26■□□□□ 0.03
NSMCE1-201ENST00000361439 NCBP1Q09161 790 aaKnown RBP15.26■□□□□ 0.03
NSMCE1-201ENST00000361439 RAD51AP2Q09MP3 1159 aa15.26■□□□□ 0.03
NSMCE1-201ENST00000361439 PAK2Q13177 524 aa15.26■□□□□ 0.03
NSMCE1-201ENST00000361439 FAM187BQ17R55 369 aa15.26■□□□□ 0.03
NSMCE1-201ENST00000361439 UNC13DQ70J99 1090 aa15.26■□□□□ 0.03
NSMCE1-201ENST00000361439 DYMQ7RTS9 669 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms