RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 HOXC10Q9NYD6 342 aa13.52□□□□□ -0.25
UBA3-202ENST00000361055 FAM169AQ9Y6X4 670 aa13.52□□□□□ -0.25
UBA3-202ENST00000361055 CALUO43852 315 aaPredicted RBP13.51□□□□□ -0.25
UBA3-202ENST00000361055 ZBED4O75132 1171 aa13.51□□□□□ -0.25
UBA3-202ENST00000361055 KIF4AO95239 1232 aa13.51□□□□□ -0.25
UBA3-202ENST00000361055 AFPP02771 609 aaKnown RBP13.51□□□□□ -0.25
UBA3-202ENST00000361055 UCHL3P15374 230 aa13.51□□□□□ -0.25
UBA3-202ENST00000361055 PABPC4Q13310 644 aaKnown RBP eCLIP13.51□□□□□ -0.25
UBA3-202ENST00000361055 CCDC174Q6PII3 467 aa13.51□□□□□ -0.25
UBA3-202ENST00000361055 ZNF571Q7Z3V5 609 aaPredicted RBP13.51□□□□□ -0.25
UBA3-202ENST00000361055 ERMNQ8TAM6 284 aa13.51□□□□□ -0.25
UBA3-202ENST00000361055 MS4A4AQ96JQ5 239 aa13.51□□□□□ -0.25
UBA3-202ENST00000361055 CALR3Q96L12 384 aaKnown RBP13.51□□□□□ -0.25
UBA3-202ENST00000361055 METTL14Q9HCE5 456 aaKnown RBP13.51□□□□□ -0.25
UBA3-202ENST00000361055 ADAMTS5Q9UNA0 930 aa13.51□□□□□ -0.25
UBA3-202ENST00000361055 DNM3Q9UQ16 869 aa13.51□□□□□ -0.25
UBA3-202ENST00000361055 TLL2Q9Y6L7 1015 aa13.51□□□□□ -0.25
UBA3-202ENST00000361055 SRRM3A6NNA2 597 aaPredicted RBP13.51□□□□□ -0.25
UBA3-202ENST00000361055 BHMG1C9JSJ3 638 aaPredicted RBP13.51□□□□□ -0.25
UBA3-202ENST00000361055 ANKRD65E5RJM6 399 aa13.51□□□□□ -0.25
UBA3-202ENST00000361055 VWA5AO00534 786 aa13.51□□□□□ -0.25
UBA3-202ENST00000361055 RAD51CO43502 376 aa13.51□□□□□ -0.25
UBA3-202ENST00000361055 KRT14P02533 472 aa13.51□□□□□ -0.25
UBA3-202ENST00000361055 CETPP11597 493 aa13.51□□□□□ -0.25
UBA3-202ENST00000361055 SLC9A1P19634 815 aa13.51□□□□□ -0.25
UBA3-202ENST00000361055 PON1P27169 355 aa13.51□□□□□ -0.25
UBA3-202ENST00000361055 RPA1P27694 616 aa13.51□□□□□ -0.25
UBA3-202ENST00000361055 ZNF157P51786 506 aaPredicted RBP13.51□□□□□ -0.25
UBA3-202ENST00000361055 AP3B2Q13367 1082 aa13.51□□□□□ -0.25
UBA3-202ENST00000361055 CUL1Q13616 776 aa13.51□□□□□ -0.25
UBA3-202ENST00000361055 EXOC3L4Q17RC7 722 aa13.51□□□□□ -0.25
UBA3-202ENST00000361055 SKIDA1Q1XH10 827 aa13.51□□□□□ -0.25
UBA3-202ENST00000361055 USH1GQ495M9 461 aa13.51□□□□□ -0.25
UBA3-202ENST00000361055 USP17L6PQ6QN14 398 aa13.51□□□□□ -0.25
UBA3-202ENST00000361055 LRIG3Q6UXM1 1119 aa13.51□□□□□ -0.25
UBA3-202ENST00000361055 PACS2Q86VP3 889 aa13.51□□□□□ -0.25
UBA3-202ENST00000361055 CATSPER3Q86XQ3 398 aa13.51□□□□□ -0.25
UBA3-202ENST00000361055 CRYGNQ8WXF5 182 aa13.51□□□□□ -0.25
UBA3-202ENST00000361055 SPAG5Q96R06 1193 aa13.51□□□□□ -0.25
UBA3-202ENST00000361055 ANO3Q9BYT9 981 aa13.51□□□□□ -0.25
UBA3-202ENST00000361055 NAGPAQ9UK23 515 aa13.51□□□□□ -0.25
UBA3-202ENST00000361055 PNMA2Q9UL42 364 aa13.51□□□□□ -0.25
UBA3-202ENST00000361055 INTUQ9ULD6 942 aa13.51□□□□□ -0.25
UBA3-202ENST00000361055 CTDP1Q9Y5B0 961 aaPredicted RBP13.51□□□□□ -0.25
UBA3-202ENST00000361055 A0A0A6YYK5 440 aaPredicted RBP13.5□□□□□ -0.25
UBA3-202ENST00000361055 ZSCAN5CA6NGD5 496 aaPredicted RBP13.5□□□□□ -0.25
UBA3-202ENST00000361055 TMEM88BA6NKF7 163 aa13.5□□□□□ -0.25
UBA3-202ENST00000361055 HMGB1P1B2RPK0 211 aaPredicted RBP13.5□□□□□ -0.25
UBA3-202ENST00000361055 ICAM1P05362 532 aa13.5□□□□□ -0.25
UBA3-202ENST00000361055 RPL13P26373 211 aaKnown RBP13.5□□□□□ -0.25
UBA3-202ENST00000361055 CACNB1Q02641 598 aaPredicted RBP13.5□□□□□ -0.25
UBA3-202ENST00000361055 Q4G0T1 1027 aa13.5□□□□□ -0.25
UBA3-202ENST00000361055 RGMBQ6NW40 437 aa13.5□□□□□ -0.25
UBA3-202ENST00000361055 ALKBH5Q6P6C2 394 aaKnown RBP13.5□□□□□ -0.25
UBA3-202ENST00000361055 KCTD17Q8N5Z5 321 aa13.5□□□□□ -0.25
UBA3-202ENST00000361055 LRRC57Q8N9N7 239 aa13.5□□□□□ -0.25
UBA3-202ENST00000361055 ATG4CQ96DT6 458 aa13.5□□□□□ -0.25
UBA3-202ENST00000361055 NENFQ9UMX5 172 aa13.5□□□□□ -0.25
UBA3-202ENST00000361055 PACSIN2Q9UNF0 486 aaPredicted RBP13.5□□□□□ -0.25
UBA3-202ENST00000361055 ZNF536O15090 1300 aa13.5□□□□□ -0.25
UBA3-202ENST00000361055 ESYT3A0FGR9 886 aa13.49□□□□□ -0.25
UBA3-202ENST00000361055 SPDYE16A6NNV3 312 aaPredicted RBP13.49□□□□□ -0.25
UBA3-202ENST00000361055 KCNK3O14649 394 aa13.49□□□□□ -0.25
UBA3-202ENST00000361055 ACTN1P12814 892 aa13.49□□□□□ -0.25
UBA3-202ENST00000361055 HOXD13P35453 343 aa13.49□□□□□ -0.25
UBA3-202ENST00000361055 NPEPPSP55786 919 aa13.49□□□□□ -0.25
UBA3-202ENST00000361055 IRX3P78415 501 aaPredicted RBP13.49□□□□□ -0.25
UBA3-202ENST00000361055 SPIRE1Q08AE8 756 aa13.49□□□□□ -0.25
UBA3-202ENST00000361055 MKRN3Q13064 507 aaKnown RBP13.49□□□□□ -0.25
UBA3-202ENST00000361055 BMT2Q1RMZ1 405 aa13.49□□□□□ -0.25
UBA3-202ENST00000361055 GPAT2Q6NUI2 795 aa13.49□□□□□ -0.25
UBA3-202ENST00000361055 SLFN11Q7Z7L1 901 aa13.49□□□□□ -0.25
UBA3-202ENST00000361055 ETNPPLQ8TBG4 499 aa13.49□□□□□ -0.25
UBA3-202ENST00000361055 ATP6V1G3Q96LB4 118 aa13.49□□□□□ -0.25
UBA3-202ENST00000361055 FAM20AQ96MK3 541 aa13.49□□□□□ -0.25
UBA3-202ENST00000361055 ZHX3Q9H4I2 956 aa13.49□□□□□ -0.25
UBA3-202ENST00000361055 ATXN2Q99700 1313 aaKnown RBP13.49□□□□□ -0.25
UBA3-202ENST00000361055 A0A0G2JMZ2 1700 aa13.49□□□□□ -0.25
UBA3-202ENST00000361055 CCL15-CCL14A0A0B4J2E2 113 aa13.49□□□□□ -0.25
UBA3-202ENST00000361055 GTPBP10A4D1E9 387 aaKnown RBP13.49□□□□□ -0.25
UBA3-202ENST00000361055 CCDC188H7C350 402 aa13.49□□□□□ -0.25
UBA3-202ENST00000361055 MEIS2O14770 477 aa13.49□□□□□ -0.25
UBA3-202ENST00000361055 SLC16A3O15427 465 aaKnown RBP13.49□□□□□ -0.25
UBA3-202ENST00000361055 GFPT2O94808 682 aa13.49□□□□□ -0.25
UBA3-202ENST00000361055 SPATA31C1P0DKV0 1188 aa13.49□□□□□ -0.25
UBA3-202ENST00000361055 XRCC5P13010 732 aaKnown RBP13.49□□□□□ -0.25
UBA3-202ENST00000361055 OSBPP22059 807 aa13.49□□□□□ -0.25
UBA3-202ENST00000361055 STAT3P40763 770 aa13.49□□□□□ -0.25
UBA3-202ENST00000361055 GUCY2FP51841 1108 aa13.49□□□□□ -0.25
UBA3-202ENST00000361055 OAZ1P54368 228 aa13.49□□□□□ -0.25
UBA3-202ENST00000361055 EPHA7Q15375 998 aa13.49□□□□□ -0.25
UBA3-202ENST00000361055 ENOX2Q16206 610 aaKnown RBP13.49□□□□□ -0.25
UBA3-202ENST00000361055 CCL15Q16663 113 aa13.49□□□□□ -0.25
UBA3-202ENST00000361055 VPS36Q86VN1 386 aa13.49□□□□□ -0.25
UBA3-202ENST00000361055 RASAL3Q86YV0 1011 aa13.49□□□□□ -0.25
UBA3-202ENST00000361055 HHIPL1Q96JK4 782 aa13.49□□□□□ -0.25
UBA3-202ENST00000361055 PAGR1Q9BTK6 254 aa13.49□□□□□ -0.25
UBA3-202ENST00000361055 EPN3Q9H201 632 aa13.49□□□□□ -0.25
UBA3-202ENST00000361055 CCPG1Q9ULG6 757 aa13.49□□□□□ -0.25
UBA3-202ENST00000361055 POTEFA5A3E0 1075 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms