RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 POLD1P28340 1107 aa13.2□□□□□ -0.3
COL20A1-201ENST00000358894 STX2P32856 288 aa13.2□□□□□ -0.3
COL20A1-201ENST00000358894 QARSP47897 775 aaKnown RBP13.2□□□□□ -0.3
COL20A1-201ENST00000358894 MAGOHP61326 146 aaKnown RBP13.2□□□□□ -0.3
COL20A1-201ENST00000358894 CYP4F22Q6NT55 531 aa13.2□□□□□ -0.3
COL20A1-201ENST00000358894 CROCCP2Q86T23 111 aa13.2□□□□□ -0.3
COL20A1-201ENST00000358894 TTLL6Q8N841 843 aa13.2□□□□□ -0.3
COL20A1-201ENST00000358894 RNPC3Q96LT9 517 aaKnown RBP13.2□□□□□ -0.3
COL20A1-201ENST00000358894 TRIM51Q9BSJ1 452 aa13.2□□□□□ -0.3
COL20A1-201ENST00000358894 SEL1LQ9UBV2 794 aa13.2□□□□□ -0.3
COL20A1-201ENST00000358894 ZNF148Q9UQR1 794 aa13.2□□□□□ -0.3
COL20A1-201ENST00000358894 ACSL3O95573 720 aa13.2□□□□□ -0.3
COL20A1-201ENST00000358894 ECEL1O95672 775 aa13.2□□□□□ -0.3
COL20A1-201ENST00000358894 P4HBP07237 508 aaKnown RBP13.2□□□□□ -0.3
COL20A1-201ENST00000358894 ATF2P15336 505 aa13.2□□□□□ -0.3
COL20A1-201ENST00000358894 GIT2Q14161 759 aa13.2□□□□□ -0.3
COL20A1-201ENST00000358894 ZKSCAN8Q15776 578 aaPredicted RBP13.2□□□□□ -0.3
COL20A1-201ENST00000358894 RNF207Q6ZRF8 634 aa13.2□□□□□ -0.3
COL20A1-201ENST00000358894 EEPD1Q7L9B9 569 aa13.2□□□□□ -0.3
COL20A1-201ENST00000358894 HAUS6Q7Z4H7 955 aa13.2□□□□□ -0.3
COL20A1-201ENST00000358894 SLC35G2Q8TBE7 412 aa13.2□□□□□ -0.3
COL20A1-201ENST00000358894 CELF4Q9BZC1 486 aaKnown RBP13.2□□□□□ -0.3
COL20A1-201ENST00000358894 TBK1Q9UHD2 729 aa13.2□□□□□ -0.3
COL20A1-201ENST00000358894 COPB2P35606 906 aa13.2□□□□□ -0.3
COL20A1-201ENST00000358894 CDK17Q00537 523 aa13.2□□□□□ -0.3
COL20A1-201ENST00000358894 RINT1Q6NUQ1 792 aa13.2□□□□□ -0.3
COL20A1-201ENST00000358894 TRIM59Q8IWR1 403 aa13.2□□□□□ -0.3
COL20A1-201ENST00000358894 PRMT6Q96LA8 375 aaPredicted RBP13.2□□□□□ -0.3
COL20A1-201ENST00000358894 HERC5Q9UII4 1024 aaKnown RBP13.2□□□□□ -0.3
COL20A1-201ENST00000358894 DENND3A2RUS2 1198 aa13.19□□□□□ -0.3
COL20A1-201ENST00000358894 GPC5P78333 572 aa13.19□□□□□ -0.3
COL20A1-201ENST00000358894 DDR1Q08345 913 aa13.19□□□□□ -0.3
COL20A1-201ENST00000358894 EPHA7Q15375 998 aa13.19□□□□□ -0.3
COL20A1-201ENST00000358894 APTXQ7Z2E3 356 aaKnown RBP13.19□□□□□ -0.3
COL20A1-201ENST00000358894 CNOT8Q9UFF9 292 aaKnown RBP13.19□□□□□ -0.3
COL20A1-201ENST00000358894 ANAPC7Q9UJX3 599 aa13.19□□□□□ -0.3
COL20A1-201ENST00000358894 PON1P27169 355 aa13.19□□□□□ -0.3
COL20A1-201ENST00000358894 SEPT14Q6ZU15 432 aa13.19□□□□□ -0.3
COL20A1-201ENST00000358894 HIBCHQ6NVY1 386 aaPredicted RBP13.19□□□□□ -0.3
COL20A1-201ENST00000358894 PASD1Q8IV76 773 aa13.19□□□□□ -0.3
COL20A1-201ENST00000358894 PPP1R14CQ8TAE6 165 aa13.19□□□□□ -0.3
COL20A1-201ENST00000358894 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.19□□□□□ -0.3
COL20A1-201ENST00000358894 MAIP1Q8WWC4 291 aa13.19□□□□□ -0.3
COL20A1-201ENST00000358894 HAS1Q92839 578 aa13.19□□□□□ -0.3
COL20A1-201ENST00000358894 HEMGNQ9BXL5 484 aa13.19□□□□□ -0.3
COL20A1-201ENST00000358894 TUFT1Q9NNX1 390 aa13.19□□□□□ -0.3
COL20A1-201ENST00000358894 SIK3Q9Y2K2 1263 aa13.19□□□□□ -0.3
COL20A1-201ENST00000358894 PCDHAC2Q9Y5I4 1007 aa13.19□□□□□ -0.3
COL20A1-201ENST00000358894 IRAK1P51617 712 aa13.18□□□□□ -0.3
COL20A1-201ENST00000358894 SETDB1Q15047 1291 aa13.18□□□□□ -0.3
COL20A1-201ENST00000358894 LMBRD2Q68DH5 695 aaPredicted RBP13.18□□□□□ -0.3
COL20A1-201ENST00000358894 METTL13Q8N6R0 699 aa13.18□□□□□ -0.3
COL20A1-201ENST00000358894 USP38Q8NB14 1042 aa13.18□□□□□ -0.3
COL20A1-201ENST00000358894 SLC7A3Q8WY07 619 aa13.18□□□□□ -0.3
COL20A1-201ENST00000358894 ARL8AQ96BM9 186 aa13.18□□□□□ -0.3
COL20A1-201ENST00000358894 FAM163AQ96GL9 167 aaPredicted RBP13.18□□□□□ -0.3
COL20A1-201ENST00000358894 ATP6V1G3Q96LB4 118 aa13.18□□□□□ -0.3
COL20A1-201ENST00000358894 FAM213AQ9BRX8 229 aa13.18□□□□□ -0.3
COL20A1-201ENST00000358894 TLR10Q9BXR5 811 aa13.18□□□□□ -0.3
COL20A1-201ENST00000358894 MAK16Q9BXY0 300 aaKnown RBP13.18□□□□□ -0.3
COL20A1-201ENST00000358894 APEX2Q9UBZ4 518 aa13.18□□□□□ -0.3
COL20A1-201ENST00000358894 MYH2Q9UKX2 1941 aa13.18□□□□□ -0.3
COL20A1-201ENST00000358894 CYP26A1O43174 497 aa13.18□□□□□ -0.3
COL20A1-201ENST00000358894 SPP2Q13103 211 aa13.18□□□□□ -0.3
COL20A1-201ENST00000358894 BRDTQ58F21 947 aaPredicted RBP13.18□□□□□ -0.3
COL20A1-201ENST00000358894 ZNF571Q7Z3V5 609 aaPredicted RBP13.18□□□□□ -0.3
COL20A1-201ENST00000358894 CERS5Q8N5B7 392 aa13.18□□□□□ -0.3
COL20A1-201ENST00000358894 STK33Q9BYT3 514 aa13.18□□□□□ -0.3
COL20A1-201ENST00000358894 IRAK4Q9NWZ3 460 aa13.18□□□□□ -0.3
COL20A1-201ENST00000358894 GLI1P08151 1106 aa13.18□□□□□ -0.3
COL20A1-201ENST00000358894 CD58P19256 250 aa13.18□□□□□ -0.3
COL20A1-201ENST00000358894 TM4SF1P30408 202 aa13.18□□□□□ -0.3
COL20A1-201ENST00000358894 RWDD2BP57060 319 aa13.18□□□□□ -0.3
COL20A1-201ENST00000358894 VSIG1Q86XK7 387 aa13.18□□□□□ -0.3
COL20A1-201ENST00000358894 PRPF38AQ8NAV1 312 aaKnown RBP13.18□□□□□ -0.3
COL20A1-201ENST00000358894 AGBL1Q96MI9 1066 aa13.18□□□□□ -0.3
COL20A1-201ENST00000358894 TMEM39BQ9GZU3 492 aa13.18□□□□□ -0.3
COL20A1-201ENST00000358894 RAB20Q9NX57 234 aa13.18□□□□□ -0.3
COL20A1-201ENST00000358894 PSD3Q9NYI0 1048 aa13.18□□□□□ -0.3
COL20A1-201ENST00000358894 FEM1BQ9UK73 627 aa13.18□□□□□ -0.3
COL20A1-201ENST00000358894 NID2Q14112 1375 aa13.18□□□□□ -0.3
COL20A1-201ENST00000358894 SPEF2Q9C093 1822 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 FAM86B1E9PN63 330 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 MAP2K7O14733 419 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 RASGRF2O14827 1237 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 FAM86B2P0C5J1 330 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 SLC8A1P32418 973 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 BFSP1Q12934 665 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 KCTD19Q17RG1 926 aaPredicted RBP13.17□□□□□ -0.3
COL20A1-201ENST00000358894 TMEM119Q4V9L6 283 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 ZNF394Q53GI3 561 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 DCAF15Q66K64 600 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 PARP4Q9UKK3 1724 aaKnown RBP13.17□□□□□ -0.3
COL20A1-201ENST00000358894 WDR64B1ANS9 1081 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 POC1B-GALNT4F8VUJ3 575 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 SLC16A3O15427 465 aaKnown RBP13.17□□□□□ -0.3
COL20A1-201ENST00000358894 ATMINO43313 823 aaPredicted RBP13.17□□□□□ -0.3
COL20A1-201ENST00000358894 HSPA6P17066 643 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 SSTR3P32745 418 aaPredicted RBP13.17□□□□□ -0.3
COL20A1-201ENST00000358894 CASP5P51878 434 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms