RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 NECTIN4Q96NY8 510 aa9.72□□□□□ -0.85
COL4A3BP-202ENST00000357457 ZNF577Q9BSK1 485 aa9.72□□□□□ -0.85
COL4A3BP-202ENST00000357457 ZMYND12Q9H0C1 365 aa9.72□□□□□ -0.85
COL4A3BP-202ENST00000357457 SORCS3Q9UPU3 1222 aa9.72□□□□□ -0.85
COL4A3BP-202ENST00000357457 HCFC2Q9Y5Z7 792 aa9.72□□□□□ -0.85
COL4A3BP-202ENST00000357457 DNAH14Q0VDD8 3507 aa9.72□□□□□ -0.85
COL4A3BP-202ENST00000357457 C2CD4DB7Z1M9 353 aa9.71□□□□□ -0.86
COL4A3BP-202ENST00000357457 ADAMTS3O15072 1205 aa9.71□□□□□ -0.86
COL4A3BP-202ENST00000357457 EDIL3O43854 480 aa9.71□□□□□ -0.86
COL4A3BP-202ENST00000357457 ZNF862O60290 1169 aa9.71□□□□□ -0.86
COL4A3BP-202ENST00000357457 CLASP2O75122 1294 aaKnown RBP9.71□□□□□ -0.86
COL4A3BP-202ENST00000357457 BRD1O95696 1058 aa9.71□□□□□ -0.86
COL4A3BP-202ENST00000357457 PSAPP07602 524 aa9.71□□□□□ -0.86
COL4A3BP-202ENST00000357457 TMOD1P28289 359 aa9.71□□□□□ -0.86
COL4A3BP-202ENST00000357457 PBX3P40426 434 aa9.71□□□□□ -0.86
COL4A3BP-202ENST00000357457 CLCN3P51790 818 aa9.71□□□□□ -0.86
COL4A3BP-202ENST00000357457 SETQ01105 290 aaPredicted RBP9.71□□□□□ -0.86
COL4A3BP-202ENST00000357457 SMC1AQ14683 1233 aaKnown RBP9.71□□□□□ -0.86
COL4A3BP-202ENST00000357457 PFKFB3Q16875 520 aaPredicted RBP9.71□□□□□ -0.86
COL4A3BP-202ENST00000357457 CES5AQ6NT32 575 aa9.71□□□□□ -0.86
COL4A3BP-202ENST00000357457 LLGL2Q6P1M3 1020 aa9.71□□□□□ -0.86
COL4A3BP-202ENST00000357457 MAMSTRQ6ZN01 415 aa9.71□□□□□ -0.86
COL4A3BP-202ENST00000357457 RSPH1Q8WYR4 309 aa9.71□□□□□ -0.86
COL4A3BP-202ENST00000357457 LENG9Q96B70 501 aa9.71□□□□□ -0.86
COL4A3BP-202ENST00000357457 FAM167AQ96KS9 214 aa9.71□□□□□ -0.86
COL4A3BP-202ENST00000357457 PPP1R16BQ96T49 567 aa9.71□□□□□ -0.86
COL4A3BP-202ENST00000357457 TRAIPQ9BWF2 469 aa9.71□□□□□ -0.86
COL4A3BP-202ENST00000357457 POMKQ9H5K3 350 aa9.71□□□□□ -0.86
COL4A3BP-202ENST00000357457 NRBP2Q9NSY0 501 aa9.71□□□□□ -0.86
COL4A3BP-202ENST00000357457 FAM86C1Q9NVL1 165 aa9.71□□□□□ -0.86
COL4A3BP-202ENST00000357457 GABBR1Q9UBS5 961 aa9.71□□□□□ -0.86
COL4A3BP-202ENST00000357457 CDH22Q9UJ99 828 aa9.71□□□□□ -0.86
COL4A3BP-202ENST00000357457 USTQ9Y2C2 406 aa9.71□□□□□ -0.86
COL4A3BP-202ENST00000357457 IRAK3Q9Y616 596 aa9.71□□□□□ -0.86
COL4A3BP-202ENST00000357457 GVINP1Q7Z2Y8 2422 aa9.71□□□□□ -0.86
COL4A3BP-202ENST00000357457 H0Y858 1186 aa9.7□□□□□ -0.86
COL4A3BP-202ENST00000357457 CXCL14O95715 111 aa9.7□□□□□ -0.86
COL4A3BP-202ENST00000357457 DARSP14868 501 aaKnown RBP9.7□□□□□ -0.86
COL4A3BP-202ENST00000357457 ADD1P35611 737 aaKnown RBP9.7□□□□□ -0.86
COL4A3BP-202ENST00000357457 MTHFRP42898 656 aa9.7□□□□□ -0.86
COL4A3BP-202ENST00000357457 ALDH7A1P49419 539 aaKnown RBP9.7□□□□□ -0.86
COL4A3BP-202ENST00000357457 GPC3P51654 580 aa9.7□□□□□ -0.86
COL4A3BP-202ENST00000357457 BCAR1P56945 870 aa9.7□□□□□ -0.86
COL4A3BP-202ENST00000357457 CDC42EP1Q00587 391 aa9.7□□□□□ -0.86
COL4A3BP-202ENST00000357457 MTMR3Q13615 1198 aa9.7□□□□□ -0.86
COL4A3BP-202ENST00000357457 TARBP2Q15633 366 aaKnown RBP9.7□□□□□ -0.86
COL4A3BP-202ENST00000357457 RNF20Q5VTR2 975 aa9.7□□□□□ -0.86
COL4A3BP-202ENST00000357457 ZDHHC14Q8IZN3 488 aa9.7□□□□□ -0.86
COL4A3BP-202ENST00000357457 ABI1Q8IZP0 508 aa9.7□□□□□ -0.86
COL4A3BP-202ENST00000357457 MAP7D2Q96T17 732 aa9.7□□□□□ -0.86
COL4A3BP-202ENST00000357457 APOL5Q9BWW9 433 aa9.7□□□□□ -0.86
COL4A3BP-202ENST00000357457 CHST12Q9NRB3 414 aa9.7□□□□□ -0.86
COL4A3BP-202ENST00000357457 DACT1Q9NYF0 836 aa9.7□□□□□ -0.86
COL4A3BP-202ENST00000357457 AKT3Q9Y243 479 aa9.7□□□□□ -0.86
COL4A3BP-202ENST00000357457 BOLA1Q9Y3E2 137 aa9.7□□□□□ -0.86
COL4A3BP-202ENST00000357457 EP300Q09472 2414 aaPredicted RBP9.7□□□□□ -0.86
COL4A3BP-202ENST00000357457 IGKV6-21A0A0C4DH24 114 aa9.69□□□□□ -0.86
COL4A3BP-202ENST00000357457 CCDC196A0A1B0GTZ2 297 aa9.69□□□□□ -0.86
COL4A3BP-202ENST00000357457 CARNS1A5YM72 827 aa9.69□□□□□ -0.86
COL4A3BP-202ENST00000357457 WDR64B1ANS9 1081 aa9.69□□□□□ -0.86
COL4A3BP-202ENST00000357457 OATP04181 439 aa9.69□□□□□ -0.86
COL4A3BP-202ENST00000357457 GNA11P29992 359 aa9.69□□□□□ -0.86
COL4A3BP-202ENST00000357457 NBL1P41271 181 aa9.69□□□□□ -0.86
COL4A3BP-202ENST00000357457 CLCN5P51795 746 aa9.69□□□□□ -0.86
COL4A3BP-202ENST00000357457 POLGP54098 1239 aaPredicted RBP9.69□□□□□ -0.86
COL4A3BP-202ENST00000357457 FOXK2Q01167 660 aa9.69□□□□□ -0.86
COL4A3BP-202ENST00000357457 BMS1Q14692 1282 aaKnown RBP9.69□□□□□ -0.86
COL4A3BP-202ENST00000357457 ADCK5Q3MIX3 580 aa9.69□□□□□ -0.86
COL4A3BP-202ENST00000357457 PRR16Q569H4 304 aa9.69□□□□□ -0.86
COL4A3BP-202ENST00000357457 ATAT1Q5SQI0 421 aa9.69□□□□□ -0.86
COL4A3BP-202ENST00000357457 KIAA1841Q6NSI8 718 aa9.69□□□□□ -0.86
COL4A3BP-202ENST00000357457 TRMT1LQ7Z2T5 733 aaKnown RBP9.69□□□□□ -0.86
COL4A3BP-202ENST00000357457 ZBTB33Q86T24 672 aa9.69□□□□□ -0.86
COL4A3BP-202ENST00000357457 LRRC71Q8N4P6 559 aa9.69□□□□□ -0.86
COL4A3BP-202ENST00000357457 TMEM105Q8N8V8 129 aa9.69□□□□□ -0.86
COL4A3BP-202ENST00000357457 HELQQ8TDG4 1101 aa9.69□□□□□ -0.86
COL4A3BP-202ENST00000357457 SLC22A17Q8WUG5 538 aa9.69□□□□□ -0.86
COL4A3BP-202ENST00000357457 TCEANC2Q96MN5 208 aa9.69□□□□□ -0.86
COL4A3BP-202ENST00000357457 CEP89Q96ST8 783 aa9.69□□□□□ -0.86
COL4A3BP-202ENST00000357457 MRPL9Q9BYD2 267 aaKnown RBP9.69□□□□□ -0.86
COL4A3BP-202ENST00000357457 ZBP1Q9H171 429 aa9.69□□□□□ -0.86
COL4A3BP-202ENST00000357457 C6orf50Q9HD87 102 aa9.69□□□□□ -0.86
COL4A3BP-202ENST00000357457 ANO2Q9NQ90 1003 aa9.69□□□□□ -0.86
COL4A3BP-202ENST00000357457 DISC1Q9NRI5 854 aa9.69□□□□□ -0.86
COL4A3BP-202ENST00000357457 ZNF292O60281 2723 aa9.69□□□□□ -0.86
COL4A3BP-202ENST00000357457 KLF18A0A0U1RQI7 1052 aa9.68□□□□□ -0.86
COL4A3BP-202ENST00000357457 GOLGA8AA7E2F4 631 aa9.68□□□□□ -0.86
COL4A3BP-202ENST00000357457 GOLGA8BA8MQT2 603 aa9.68□□□□□ -0.86
COL4A3BP-202ENST00000357457 NT5C1B-RDH14C9J2C7 533 aa9.68□□□□□ -0.86
COL4A3BP-202ENST00000357457 PRPF3O43395 683 aaKnown RBP9.68□□□□□ -0.86
COL4A3BP-202ENST00000357457 ZNF623O75123 536 aa9.68□□□□□ -0.86
COL4A3BP-202ENST00000357457 STBD1O95210 358 aa9.68□□□□□ -0.86
COL4A3BP-202ENST00000357457 GALTP07902 379 aa9.68□□□□□ -0.86
COL4A3BP-202ENST00000357457 CTSAP10619 480 aa9.68□□□□□ -0.86
COL4A3BP-202ENST00000357457 SP100P23497 879 aaPredicted RBP9.68□□□□□ -0.86
COL4A3BP-202ENST00000357457 PHKA2P46019 1235 aa9.68□□□□□ -0.86
COL4A3BP-202ENST00000357457 USP11P51784 963 aa9.68□□□□□ -0.86
COL4A3BP-202ENST00000357457 GIT2Q14161 759 aa9.68□□□□□ -0.86
COL4A3BP-202ENST00000357457 ASCL5Q7RTU5 278 aa9.68□□□□□ -0.86
COL4A3BP-202ENST00000357457 DDX53Q86TM3 631 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms