RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 GAS7O60861 476 aa13.5□□□□□ -0.25
BDNF-202ENST00000356660 ECEL1O95672 775 aa13.5□□□□□ -0.25
BDNF-202ENST00000356660 NQO1P15559 274 aaKnown RBP13.5□□□□□ -0.25
BDNF-202ENST00000356660 MSH2P43246 934 aa13.5□□□□□ -0.25
BDNF-202ENST00000356660 USP37Q86T82 979 aa13.5□□□□□ -0.25
BDNF-202ENST00000356660 MREGQ8N565 214 aa13.5□□□□□ -0.25
BDNF-202ENST00000356660 PABPC3Q9H361 631 aaKnown RBP13.5□□□□□ -0.25
BDNF-202ENST00000356660 PCIF1Q9H4Z3 704 aa13.5□□□□□ -0.25
BDNF-202ENST00000356660 TRPC6Q9Y210 931 aa13.5□□□□□ -0.25
BDNF-202ENST00000356660 RICTORQ6R327 1708 aa13.5□□□□□ -0.25
BDNF-202ENST00000356660 CCDC160A6NGH7 325 aa13.49□□□□□ -0.25
BDNF-202ENST00000356660 TLR2O60603 784 aa13.49□□□□□ -0.25
BDNF-202ENST00000356660 IFNB1P01574 187 aa13.49□□□□□ -0.25
BDNF-202ENST00000356660 NR3C1P04150 777 aa13.49□□□□□ -0.25
BDNF-202ENST00000356660 ALAS1P13196 640 aa13.49□□□□□ -0.25
BDNF-202ENST00000356660 SPATA21Q7Z572 469 aa13.49□□□□□ -0.25
BDNF-202ENST00000356660 SCYL3Q8IZE3 742 aa13.49□□□□□ -0.25
BDNF-202ENST00000356660 GBP7Q8N8V2 638 aaPredicted RBP13.49□□□□□ -0.25
BDNF-202ENST00000356660 PIGOQ8TEQ8 1089 aa13.49□□□□□ -0.25
BDNF-202ENST00000356660 CCDC127Q96BQ5 260 aa13.49□□□□□ -0.25
BDNF-202ENST00000356660 C18orf8Q96DM3 657 aa13.49□□□□□ -0.25
BDNF-202ENST00000356660 FNBP1Q96RU3 617 aa13.49□□□□□ -0.25
BDNF-202ENST00000356660 SERPINB13Q9UIV8 391 aa13.49□□□□□ -0.25
BDNF-202ENST00000356660 NRXN3Q9Y4C0 1643 aa13.49□□□□□ -0.25
BDNF-202ENST00000356660 TNFRSF8P28908 595 aa13.49□□□□□ -0.25
BDNF-202ENST00000356660 C12orf60Q5U649 245 aa13.49□□□□□ -0.25
BDNF-202ENST00000356660 TTC16Q8NEE8 873 aa13.49□□□□□ -0.25
BDNF-202ENST00000356660 C1orf54Q8WWF1 131 aa13.49□□□□□ -0.25
BDNF-202ENST00000356660 UBE2TQ9NPD8 197 aaPredicted RBP13.49□□□□□ -0.25
BDNF-202ENST00000356660 BLOC1S4Q9NUP1 217 aa13.49□□□□□ -0.25
BDNF-202ENST00000356660 AP1G2O75843 785 aa13.49□□□□□ -0.25
BDNF-202ENST00000356660 DRD4P21917 467 aa13.49□□□□□ -0.25
BDNF-202ENST00000356660 HNRNPH3P31942 346 aaKnown RBP13.49□□□□□ -0.25
BDNF-202ENST00000356660 ALDH5A1P51649 535 aaPredicted RBP13.49□□□□□ -0.25
BDNF-202ENST00000356660 RWDD2BP57060 319 aa13.49□□□□□ -0.25
BDNF-202ENST00000356660 IL9RQ01113 521 aa13.49□□□□□ -0.25
BDNF-202ENST00000356660 BATF3Q9NR55 127 aa13.49□□□□□ -0.25
BDNF-202ENST00000356660 PCDHGC5Q9Y5F6 944 aa13.49□□□□□ -0.25
BDNF-202ENST00000356660 SPAG7O75391 227 aa13.48□□□□□ -0.25
BDNF-202ENST00000356660 ARHGEF18Q6ZSZ5 1173 aa13.48□□□□□ -0.25
BDNF-202ENST00000356660 FAM178BQ8IXR5 827 aa13.48□□□□□ -0.25
BDNF-202ENST00000356660 ACTRT1Q8TDG2 376 aa13.48□□□□□ -0.25
BDNF-202ENST00000356660 NUDCD1Q96RS6 583 aa13.48□□□□□ -0.25
BDNF-202ENST00000356660 C15orf41Q9Y2V0 281 aa13.48□□□□□ -0.25
BDNF-202ENST00000356660 ATF2P15336 505 aa13.48□□□□□ -0.25
BDNF-202ENST00000356660 KNOP1Q1ED39 458 aaKnown RBP13.48□□□□□ -0.25
BDNF-202ENST00000356660 SPRED3Q2MJR0 410 aa13.48□□□□□ -0.25
BDNF-202ENST00000356660 RASIP1Q5U651 963 aa13.48□□□□□ -0.25
BDNF-202ENST00000356660 TBC1D9BQ66K14 1250 aa13.48□□□□□ -0.25
BDNF-202ENST00000356660 LRRC8CQ8TDW0 803 aa13.48□□□□□ -0.25
BDNF-202ENST00000356660 RFFLQ8WZ73 363 aa13.48□□□□□ -0.25
BDNF-202ENST00000356660 TRIM4Q9C037 500 aa13.48□□□□□ -0.25
BDNF-202ENST00000356660 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.48□□□□□ -0.25
BDNF-202ENST00000356660 BSDC1Q9NW68 430 aaPredicted RBP13.48□□□□□ -0.25
BDNF-202ENST00000356660 TESPA1A2RU30 521 aaPredicted RBP13.48□□□□□ -0.25
BDNF-202ENST00000356660 IRF6O14896 467 aa13.48□□□□□ -0.25
BDNF-202ENST00000356660 AGTP01019 485 aa13.48□□□□□ -0.25
BDNF-202ENST00000356660 FYB2Q5VWT5 728 aa13.48□□□□□ -0.25
BDNF-202ENST00000356660 HGSNATQ68CP4 663 aa13.48□□□□□ -0.25
BDNF-202ENST00000356660 PNMA5Q96PV4 448 aa13.48□□□□□ -0.25
BDNF-202ENST00000356660 IL17RBQ9NRM6 502 aa13.48□□□□□ -0.25
BDNF-202ENST00000356660 CLEC11AQ9Y240 323 aa13.48□□□□□ -0.25
BDNF-202ENST00000356660 IKBKGQ9Y6K9 419 aa13.48□□□□□ -0.25
BDNF-202ENST00000356660 FTLP02792 175 aaPredicted RBP13.48□□□□□ -0.25
BDNF-202ENST00000356660 PSMC2P35998 433 aaKnown RBP13.48□□□□□ -0.25
BDNF-202ENST00000356660 RASSF2P50749 326 aa13.48□□□□□ -0.25
BDNF-202ENST00000356660 RFX8Q6ZV50 586 aa13.48□□□□□ -0.25
BDNF-202ENST00000356660 FBXO11Q86XK2 927 aa13.48□□□□□ -0.25
BDNF-202ENST00000356660 ZNF653Q96CK0 615 aa13.48□□□□□ -0.25
BDNF-202ENST00000356660 HEMGNQ9BXL5 484 aa13.48□□□□□ -0.25
BDNF-202ENST00000356660 RASA4BC9J798 803 aa13.47□□□□□ -0.25
BDNF-202ENST00000356660 RASA4O43374 803 aa13.47□□□□□ -0.25
BDNF-202ENST00000356660 CCND1P24385 295 aa13.47□□□□□ -0.25
BDNF-202ENST00000356660 MYL7Q01449 175 aa13.47□□□□□ -0.25
BDNF-202ENST00000356660 C6orf163Q5TEZ5 329 aa13.47□□□□□ -0.25
BDNF-202ENST00000356660 RCSD1Q6JBY9 416 aa13.47□□□□□ -0.25
BDNF-202ENST00000356660 AADACL2Q6P093 401 aa13.47□□□□□ -0.25
BDNF-202ENST00000356660 LRRC55Q6ZSA7 311 aa13.47□□□□□ -0.25
BDNF-202ENST00000356660 GBP5Q96PP8 586 aa13.47□□□□□ -0.25
BDNF-202ENST00000356660 A1CFQ9NQ94 594 aaKnown RBP13.47□□□□□ -0.25
BDNF-202ENST00000356660 TXLNGQ9NUQ3 528 aa13.47□□□□□ -0.25
BDNF-202ENST00000356660 ANAPC5Q9UJX4 755 aa13.47□□□□□ -0.25
BDNF-202ENST00000356660 ARL2BPQ9Y2Y0 163 aa13.47□□□□□ -0.25
BDNF-202ENST00000356660 PODXLO00592 558 aa13.47□□□□□ -0.25
BDNF-202ENST00000356660 BAG2O95816 211 aa13.47□□□□□ -0.25
BDNF-202ENST00000356660 DLATP10515 647 aaKnown RBP13.47□□□□□ -0.25
BDNF-202ENST00000356660 ALDH1B1P30837 517 aa13.47□□□□□ -0.25
BDNF-202ENST00000356660 CASP4P49662 377 aa13.47□□□□□ -0.25
BDNF-202ENST00000356660 COPS2P61201 443 aa13.47□□□□□ -0.25
BDNF-202ENST00000356660 KYNUQ16719 465 aa13.47□□□□□ -0.25
BDNF-202ENST00000356660 ANKRD20A3Q5VUR7 823 aa13.47□□□□□ -0.25
BDNF-202ENST00000356660 KAZNQ674X7 775 aa13.47□□□□□ -0.25
BDNF-202ENST00000356660 C3orf20Q8ND61 904 aa13.47□□□□□ -0.25
BDNF-202ENST00000356660 SPDYE1Q8NFV5 336 aaPredicted RBP13.47□□□□□ -0.25
BDNF-202ENST00000356660 ERP27Q96DN0 273 aa13.47□□□□□ -0.25
BDNF-202ENST00000356660 QTRT2Q9H974 415 aaKnown RBP13.47□□□□□ -0.25
BDNF-202ENST00000356660 DCTN4Q9UJW0 460 aa13.47□□□□□ -0.25
BDNF-202ENST00000356660 TRIM33Q9UPN9 1127 aa13.47□□□□□ -0.25
BDNF-202ENST00000356660 RABGAP1Q9Y3P9 1069 aa13.47□□□□□ -0.25
BDNF-202ENST00000356660 TNS3Q68CZ2 1445 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms