RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 EIF5BO60841 1220 aaKnown RBP11.96□□□□□ -0.49
CAPN3-204ENST00000356316 BAG4O95429 457 aaKnown RBP11.96□□□□□ -0.49
CAPN3-204ENST00000356316 SKIP12755 728 aa11.96□□□□□ -0.49
CAPN3-204ENST00000356316 GCFC2P16383 781 aaKnown RBP11.96□□□□□ -0.49
CAPN3-204ENST00000356316 SFPQP23246 707 aaKnown RBP eCLIP11.96□□□□□ -0.49
CAPN3-204ENST00000356316 PPM1AP35813 382 aa11.96□□□□□ -0.49
CAPN3-204ENST00000356316 QARSP47897 775 aaKnown RBP11.96□□□□□ -0.49
CAPN3-204ENST00000356316 ALDH7A1P49419 539 aaKnown RBP11.96□□□□□ -0.49
CAPN3-204ENST00000356316 ERVFC1P60507 584 aa11.96□□□□□ -0.49
CAPN3-204ENST00000356316 PLCB3Q01970 1234 aa11.96□□□□□ -0.49
CAPN3-204ENST00000356316 COASYQ13057 564 aa11.96□□□□□ -0.49
CAPN3-204ENST00000356316 TARBP2Q15633 366 aaKnown RBP11.96□□□□□ -0.49
CAPN3-204ENST00000356316 KCNT2Q6UVM3 1135 aa11.96□□□□□ -0.49
CAPN3-204ENST00000356316 NEK8Q86SG6 692 aa11.96□□□□□ -0.49
CAPN3-204ENST00000356316 RHPN2Q8IUC4 686 aa11.96□□□□□ -0.49
CAPN3-204ENST00000356316 LRRC43Q8N309 656 aa11.96□□□□□ -0.49
CAPN3-204ENST00000356316 MRPS27Q92552 414 aaKnown RBP11.96□□□□□ -0.49
CAPN3-204ENST00000356316 MSLNLQ96KJ4 702 aa11.96□□□□□ -0.49
CAPN3-204ENST00000356316 MBOAT7Q96N66 472 aa11.96□□□□□ -0.49
CAPN3-204ENST00000356316 AIFM3Q96NN9 605 aa11.96□□□□□ -0.49
CAPN3-204ENST00000356316 CASD1Q96PB1 797 aa11.96□□□□□ -0.49
CAPN3-204ENST00000356316 CWH43Q9H720 699 aa11.96□□□□□ -0.49
CAPN3-204ENST00000356316 NGRNQ9NPE2 291 aaKnown RBP11.96□□□□□ -0.49
CAPN3-204ENST00000356316 ENTPD7Q9NQZ7 604 aa11.96□□□□□ -0.49
CAPN3-204ENST00000356316 SPG21Q9NZD8 308 aa11.96□□□□□ -0.49
CAPN3-204ENST00000356316 SUCLA2Q9P2R7 463 aaPredicted RBP11.96□□□□□ -0.49
CAPN3-204ENST00000356316 LZTS1Q9Y250 596 aa11.96□□□□□ -0.49
CAPN3-204ENST00000356316 MYO7AQ13402 2215 aa11.95□□□□□ -0.5
CAPN3-204ENST00000356316 A0A087WZ62 844 aa11.95□□□□□ -0.5
CAPN3-204ENST00000356316 MAFO75444 373 aaPredicted RBP11.95□□□□□ -0.5
CAPN3-204ENST00000356316 CSDE1O75534 798 aaKnown RBP11.95□□□□□ -0.5
CAPN3-204ENST00000356316 EYA4O95677 639 aa11.95□□□□□ -0.5
CAPN3-204ENST00000356316 FGFR4P22455 802 aa11.95□□□□□ -0.5
CAPN3-204ENST00000356316 SCRN1Q12765 414 aa11.95□□□□□ -0.5
CAPN3-204ENST00000356316 TWF2Q6IBS0 349 aaKnown RBP11.95□□□□□ -0.5
CAPN3-204ENST00000356316 PPP4R3AQ6IN85 833 aa11.95□□□□□ -0.5
CAPN3-204ENST00000356316 OTUD6AQ7L8S5 288 aa11.95□□□□□ -0.5
CAPN3-204ENST00000356316 TMC7Q7Z402 723 aa11.95□□□□□ -0.5
CAPN3-204ENST00000356316 ZNF410Q86VK4 478 aa11.95□□□□□ -0.5
CAPN3-204ENST00000356316 TMEM87AQ8NBN3 555 aa11.95□□□□□ -0.5
CAPN3-204ENST00000356316 ETNPPLQ8TBG4 499 aa11.95□□□□□ -0.5
CAPN3-204ENST00000356316 SLC7A3Q8WY07 619 aa11.95□□□□□ -0.5
CAPN3-204ENST00000356316 KIF12Q96FN5 646 aa11.95□□□□□ -0.5
CAPN3-204ENST00000356316 TCF25Q9BQ70 676 aa11.95□□□□□ -0.5
CAPN3-204ENST00000356316 SH2D3AQ9BRG2 576 aa11.95□□□□□ -0.5
CAPN3-204ENST00000356316 FDXACB1Q9BRP7 624 aaPredicted RBP11.95□□□□□ -0.5
CAPN3-204ENST00000356316 PHF20Q9BVI0 1012 aa11.95□□□□□ -0.5
CAPN3-204ENST00000356316 MRPL9Q9BYD2 267 aaKnown RBP11.95□□□□□ -0.5
CAPN3-204ENST00000356316 BRMS1Q9HCU9 246 aa11.95□□□□□ -0.5
CAPN3-204ENST00000356316 C11orf16Q9NQ32 467 aa11.95□□□□□ -0.5
CAPN3-204ENST00000356316 CLEC1BQ9P126 229 aa11.95□□□□□ -0.5
CAPN3-204ENST00000356316 BARX2Q9UMQ3 279 aaPredicted RBP11.95□□□□□ -0.5
CAPN3-204ENST00000356316 STK36Q9NRP7 1315 aa11.94□□□□□ -0.5
CAPN3-204ENST00000356316 TRIOO75962 3097 aa11.94□□□□□ -0.5
CAPN3-204ENST00000356316 CARNS1A5YM72 827 aa11.94□□□□□ -0.5
CAPN3-204ENST00000356316 TMEM150BA6NC51 233 aa11.94□□□□□ -0.5
CAPN3-204ENST00000356316 PFKFB2O60825 505 aa11.94□□□□□ -0.5
CAPN3-204ENST00000356316 P4HBP07237 508 aaKnown RBP11.94□□□□□ -0.5
CAPN3-204ENST00000356316 CA8P35219 290 aa11.94□□□□□ -0.5
CAPN3-204ENST00000356316 POLGP54098 1239 aaPredicted RBP11.94□□□□□ -0.5
CAPN3-204ENST00000356316 ANAPC15P60006 121 aa11.94□□□□□ -0.5
CAPN3-204ENST00000356316 PPP2R5CQ13362 524 aa11.94□□□□□ -0.5
CAPN3-204ENST00000356316 DRP2Q13474 957 aa11.94□□□□□ -0.5
CAPN3-204ENST00000356316 DUSP6Q16828 381 aa11.94□□□□□ -0.5
CAPN3-204ENST00000356316 PLPP4Q5VZY2 271 aa11.94□□□□□ -0.5
CAPN3-204ENST00000356316 B3GNT9Q6UX72 402 aa11.94□□□□□ -0.5
CAPN3-204ENST00000356316 LRRC55Q6ZSA7 311 aa11.94□□□□□ -0.5
CAPN3-204ENST00000356316 PIK3AP1Q6ZUJ8 805 aa11.94□□□□□ -0.5
CAPN3-204ENST00000356316 ANO5Q75V66 913 aa11.94□□□□□ -0.5
CAPN3-204ENST00000356316 CATSPER4Q7RTX7 472 aa11.94□□□□□ -0.5
CAPN3-204ENST00000356316 RNF135Q8IUD6 432 aa11.94□□□□□ -0.5
CAPN3-204ENST00000356316 SMRP1Q8NCR6 262 aa11.94□□□□□ -0.5
CAPN3-204ENST00000356316 HELQQ8TDG4 1101 aa11.94□□□□□ -0.5
CAPN3-204ENST00000356316 RSPH1Q8WYR4 309 aa11.94□□□□□ -0.5
CAPN3-204ENST00000356316 CEP170P1Q96L14 293 aa11.94□□□□□ -0.5
CAPN3-204ENST00000356316 NLRP4Q96MN2 994 aa11.94□□□□□ -0.5
CAPN3-204ENST00000356316 CYP26B1Q9NR63 512 aa11.94□□□□□ -0.5
CAPN3-204ENST00000356316 ORC3Q9UBD5 711 aaPredicted RBP11.94□□□□□ -0.5
CAPN3-204ENST00000356316 HCSTQ9UBK5 93 aa11.94□□□□□ -0.5
CAPN3-204ENST00000356316 TPCN1Q9ULQ1 816 aa11.94□□□□□ -0.5
CAPN3-204ENST00000356316 PIN4Q9Y237 131 aaKnown RBP11.94□□□□□ -0.5
CAPN3-204ENST00000356316 PCDHGC5Q9Y5F6 944 aa11.94□□□□□ -0.5
CAPN3-204ENST00000356316 IGKV6-21A0A0C4DH24 114 aa11.93□□□□□ -0.5
CAPN3-204ENST00000356316 TBX3O15119 743 aa11.93□□□□□ -0.5
CAPN3-204ENST00000356316 SLC37A4O43826 429 aa11.93□□□□□ -0.5
CAPN3-204ENST00000356316 STBD1O95210 358 aa11.93□□□□□ -0.5
CAPN3-204ENST00000356316 PHKA2P46019 1235 aa11.93□□□□□ -0.5
CAPN3-204ENST00000356316 RNASELQ05823 741 aaKnown RBP11.93□□□□□ -0.5
CAPN3-204ENST00000356316 NCBP1Q09161 790 aaKnown RBP11.93□□□□□ -0.5
CAPN3-204ENST00000356316 TRIM29Q14134 588 aa11.93□□□□□ -0.5
CAPN3-204ENST00000356316 SMC1AQ14683 1233 aaKnown RBP11.93□□□□□ -0.5
CAPN3-204ENST00000356316 NPY5RQ15761 445 aa11.93□□□□□ -0.5
CAPN3-204ENST00000356316 CLLU1OSQ5K130 101 aa11.93□□□□□ -0.5
CAPN3-204ENST00000356316 GLB1LQ6UWU2 654 aa11.93□□□□□ -0.5
CAPN3-204ENST00000356316 KSR1Q8IVT5 923 aa11.93□□□□□ -0.5
CAPN3-204ENST00000356316 SLFN12Q8IYM2 578 aa11.93□□□□□ -0.5
CAPN3-204ENST00000356316 TCP11Q8WWU5 503 aa11.93□□□□□ -0.5
CAPN3-204ENST00000356316 PGBD4Q96DM1 585 aa11.93□□□□□ -0.5
CAPN3-204ENST00000356316 MUTYHQ9UIF7 546 aa11.93□□□□□ -0.5
CAPN3-204ENST00000356316 USP15Q9Y4E8 981 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms