RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 RIBC1Q8N443 379 aaPredicted RBP16.94■□□□□ 0.3
RTN3-205ENST00000356000 DIS3LQ8TF46 1054 aaKnown RBP16.94■□□□□ 0.3
RTN3-205ENST00000356000 GRAMD1AQ96CP6 724 aa16.94■□□□□ 0.3
RTN3-205ENST00000356000 KIAA1683Q9H0B3 1180 aa16.94■□□□□ 0.3
RTN3-205ENST00000356000 TBCCD1Q9NVR7 557 aa16.94■□□□□ 0.3
RTN3-205ENST00000356000 SIK3Q9Y2K2 1263 aa16.94■□□□□ 0.3
RTN3-205ENST00000356000 SMIM23A6NLE4 172 aa16.94■□□□□ 0.3
RTN3-205ENST00000356000 PSMA7O14818 248 aa16.94■□□□□ 0.3
RTN3-205ENST00000356000 MAP3K7O43318 606 aa16.94■□□□□ 0.3
RTN3-205ENST00000356000 MARK3P27448 753 aa16.94■□□□□ 0.3
RTN3-205ENST00000356000 CERKLQ49MI3 558 aaPredicted RBP16.94■□□□□ 0.3
RTN3-205ENST00000356000 PDCD7Q8N8D1 485 aaKnown RBP16.94■□□□□ 0.3
RTN3-205ENST00000356000 CNOT6LQ96LI5 555 aaKnown RBP16.94■□□□□ 0.3
RTN3-205ENST00000356000 SIKE1Q9BRV8 207 aa16.94■□□□□ 0.3
RTN3-205ENST00000356000 PTTG2Q9NZH5 202 aa16.94■□□□□ 0.3
RTN3-205ENST00000356000 BMP15O95972 392 aa16.93■□□□□ 0.3
RTN3-205ENST00000356000 ALDH2P05091 517 aa16.93■□□□□ 0.3
RTN3-205ENST00000356000 T-ENOLP0DO92 83 aa16.93■□□□□ 0.3
RTN3-205ENST00000356000 IGHMBP2P38935 993 aaKnown RBP16.93■□□□□ 0.3
RTN3-205ENST00000356000 CFAP157Q5JU67 520 aa16.93■□□□□ 0.3
RTN3-205ENST00000356000 FAM182BQ5T319 152 aa16.93■□□□□ 0.3
RTN3-205ENST00000356000 NELFCDQ8IXH7 590 aa16.93■□□□□ 0.3
RTN3-205ENST00000356000 CSGALNACT2Q8N6G5 542 aa16.93■□□□□ 0.3
RTN3-205ENST00000356000 ERP27Q96DN0 273 aa16.93■□□□□ 0.3
RTN3-205ENST00000356000 METTL14Q9HCE5 456 aaKnown RBP16.93■□□□□ 0.3
RTN3-205ENST00000356000 ARHGEF38Q9NXL2 777 aa16.93■□□□□ 0.3
RTN3-205ENST00000356000 RGPD5Q99666 1765 aa16.93■□□□□ 0.3
RTN3-205ENST00000356000 WDR46O15213 610 aaKnown RBP16.93■□□□□ 0.3
RTN3-205ENST00000356000 PORP16435 677 aaPredicted RBP16.93■□□□□ 0.3
RTN3-205ENST00000356000 MTIF2P46199 727 aaKnown RBP16.93■□□□□ 0.3
RTN3-205ENST00000356000 POLGP54098 1239 aaPredicted RBP16.93■□□□□ 0.3
RTN3-205ENST00000356000 YARSP54577 528 aaKnown RBP16.93■□□□□ 0.3
RTN3-205ENST00000356000 MTTPP55157 894 aa16.93■□□□□ 0.3
RTN3-205ENST00000356000 KCNMA1Q12791 1236 aa16.93■□□□□ 0.3
RTN3-205ENST00000356000 MTFR1Q15390 333 aa16.93■□□□□ 0.3
RTN3-205ENST00000356000 KBTBD2Q8IY47 623 aa16.93■□□□□ 0.3
RTN3-205ENST00000356000 CYP4X1Q8N118 509 aa16.93■□□□□ 0.3
RTN3-205ENST00000356000 RBM46Q8TBY0 533 aaKnown RBP16.93■□□□□ 0.3
RTN3-205ENST00000356000 GPCPD1Q9NPB8 672 aa16.93■□□□□ 0.3
RTN3-205ENST00000356000 KRT82Q9NSB4 513 aa16.93■□□□□ 0.3
RTN3-205ENST00000356000 TUBA8Q9NY65 449 aaPredicted RBP16.93■□□□□ 0.3
RTN3-205ENST00000356000 USP11P51784 963 aa16.92■□□□□ 0.3
RTN3-205ENST00000356000 SLC29A2Q14542 456 aa16.92■□□□□ 0.3
RTN3-205ENST00000356000 FAM47EQ6ZV65 393 aa16.92■□□□□ 0.3
RTN3-205ENST00000356000 RRAGAQ7L523 313 aa16.92■□□□□ 0.3
RTN3-205ENST00000356000 HS2ST1Q7LGA3 356 aa16.92■□□□□ 0.3
RTN3-205ENST00000356000 SGMS1Q86VZ5 419 aa16.92■□□□□ 0.3
RTN3-205ENST00000356000 ST13P4Q8IZP2 240 aaPredicted RBP16.92■□□□□ 0.3
RTN3-205ENST00000356000 NKX2-3Q8TAU0 364 aa16.92■□□□□ 0.3
RTN3-205ENST00000356000 SLC16A10Q8TF71 515 aa16.92■□□□□ 0.3
RTN3-205ENST00000356000 BAP1Q92560 729 aa16.92■□□□□ 0.3
RTN3-205ENST00000356000 PFDN4Q9NQP4 134 aa16.92■□□□□ 0.3
RTN3-205ENST00000356000 ZDHHC18Q9NUE0 388 aa16.92■□□□□ 0.3
RTN3-205ENST00000356000 DENND2AQ9ULE3 1009 aa16.92■□□□□ 0.3
RTN3-205ENST00000356000 NOC2LQ9Y3T9 749 aaKnown RBP16.92■□□□□ 0.3
RTN3-205ENST00000356000 SMIM31A0A1B0GVY4 71 aa16.92■□□□□ 0.3
RTN3-205ENST00000356000 KRIT1O00522 736 aa16.92■□□□□ 0.3
RTN3-205ENST00000356000 CAPN9O14815 690 aa16.92■□□□□ 0.3
RTN3-205ENST00000356000 EMP3P54852 163 aa16.92■□□□□ 0.3
RTN3-205ENST00000356000 POU5F1Q01860 360 aaKnown RBP16.92■□□□□ 0.3
RTN3-205ENST00000356000 AUHQ13825 339 aaKnown RBP16.92■□□□□ 0.3
RTN3-205ENST00000356000 ZCWPW2Q504Y3 356 aa16.92■□□□□ 0.3
RTN3-205ENST00000356000 SH3D19Q5HYK7 790 aa16.92■□□□□ 0.3
RTN3-205ENST00000356000 HGSNATQ68CP4 663 aa16.92■□□□□ 0.3
RTN3-205ENST00000356000 MFSD5Q6N075 450 aa16.92■□□□□ 0.3
RTN3-205ENST00000356000 MARCH10Q8NA82 808 aaPredicted RBP16.92■□□□□ 0.3
RTN3-205ENST00000356000 MGARPQ8TDB4 240 aa16.92■□□□□ 0.3
RTN3-205ENST00000356000 ANKS1AQ92625 1134 aa16.92■□□□□ 0.3
RTN3-205ENST00000356000 TMEM87BQ96K49 555 aa16.92■□□□□ 0.3
RTN3-205ENST00000356000 CUEDC2Q9H467 287 aa16.92■□□□□ 0.3
RTN3-205ENST00000356000 EPB41L1Q9H4G0 881 aa16.92■□□□□ 0.3
RTN3-205ENST00000356000 NLRC4Q9NPP4 1024 aa16.92■□□□□ 0.3
RTN3-205ENST00000356000 ZNF180Q9UJW8 692 aa16.92■□□□□ 0.3
RTN3-205ENST00000356000 P4HA2O15460 535 aa16.91■□□□□ 0.3
RTN3-205ENST00000356000 TBX10O75333 385 aa16.91■□□□□ 0.3
RTN3-205ENST00000356000 ZBTB48P10074 688 aaPredicted RBP16.91■□□□□ 0.3
RTN3-205ENST00000356000 ITGA9Q13797 1035 aa16.91■□□□□ 0.3
RTN3-205ENST00000356000 CYLC2Q14093 348 aaPredicted RBP16.91■□□□□ 0.3
RTN3-205ENST00000356000 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.91■□□□□ 0.3
RTN3-205ENST00000356000 SLC27A3Q5K4L6 730 aa16.91■□□□□ 0.3
RTN3-205ENST00000356000 PHLDB3Q6NSJ2 640 aa16.91■□□□□ 0.3
RTN3-205ENST00000356000 UNC13DQ70J99 1090 aa16.91■□□□□ 0.3
RTN3-205ENST00000356000 DEPTORQ8TB45 409 aa16.91■□□□□ 0.3
RTN3-205ENST00000356000 IGDCC4Q8TDY8 1250 aa16.91■□□□□ 0.3
RTN3-205ENST00000356000 EPS8L3Q8TE67 593 aaKnown RBP16.91■□□□□ 0.3
RTN3-205ENST00000356000 CCDC113Q9H0I3 377 aa16.91■□□□□ 0.3
RTN3-205ENST00000356000 METTL5Q9NRN9 209 aaKnown RBP16.91■□□□□ 0.3
RTN3-205ENST00000356000 STX18Q9P2W9 335 aaKnown RBP16.91■□□□□ 0.3
RTN3-205ENST00000356000 ZNF212Q9UDV6 495 aa16.91■□□□□ 0.3
RTN3-205ENST00000356000 CHKBQ9Y259 395 aa16.91■□□□□ 0.3
RTN3-205ENST00000356000 KRT36O76013 467 aa16.91■□□□□ 0.3
RTN3-205ENST00000356000 ITGA4P13612 1032 aa16.91■□□□□ 0.3
RTN3-205ENST00000356000 RGS2P41220 211 aa16.91■□□□□ 0.3
RTN3-205ENST00000356000 TXKP42681 527 aa16.91■□□□□ 0.3
RTN3-205ENST00000356000 MAP7D1Q3KQU3 841 aa16.91■□□□□ 0.3
RTN3-205ENST00000356000 MYL10Q9BUA6 226 aa16.91■□□□□ 0.3
RTN3-205ENST00000356000 CELF4Q9BZC1 486 aaKnown RBP16.91■□□□□ 0.3
RTN3-205ENST00000356000 FAM207AQ9NSI2 230 aaPredicted RBP16.91■□□□□ 0.3
RTN3-205ENST00000356000 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.91■□□□□ 0.3
RTN3-205ENST00000356000 NDUFA13Q9P0J0 144 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms