RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 TM6SF1Q9BZW5 370 aa17.86■□□□□ 0.45
PDGFA-201ENST00000354513 VAV3Q9UKW4 847 aa17.86■□□□□ 0.45
PDGFA-201ENST00000354513 KCNJ14Q9UNX9 436 aa17.86■□□□□ 0.45
PDGFA-201ENST00000354513 A0A087WZ62 844 aa17.85■□□□□ 0.45
PDGFA-201ENST00000354513 MEIS3P2A8K0S8 358 aa17.85■□□□□ 0.45
PDGFA-201ENST00000354513 ZSCAN20P17040 1043 aaPredicted RBP17.85■□□□□ 0.45
PDGFA-201ENST00000354513 INF2Q27J81 1249 aa17.85■□□□□ 0.45
PDGFA-201ENST00000354513 XKR3Q5GH77 459 aa17.85■□□□□ 0.45
PDGFA-201ENST00000354513 PLA2G4FQ68DD2 849 aa17.85■□□□□ 0.45
PDGFA-201ENST00000354513 ANKRD54Q6NXT1 300 aa17.85■□□□□ 0.45
PDGFA-201ENST00000354513 TMEM173Q86WV6 379 aaPredicted RBP17.85■□□□□ 0.45
PDGFA-201ENST00000354513 ZNF710Q8N1W2 664 aa17.85■□□□□ 0.45
PDGFA-201ENST00000354513 RNF169Q8NCN4 708 aa17.85■□□□□ 0.45
PDGFA-201ENST00000354513 NLRP7Q8WX94 980 aa17.85■□□□□ 0.45
PDGFA-201ENST00000354513 FBXL18Q96ME1 805 aa17.85■□□□□ 0.45
PDGFA-201ENST00000354513 FDXACB1Q9BRP7 624 aaPredicted RBP17.85■□□□□ 0.45
PDGFA-201ENST00000354513 PHF7Q9BWX1 381 aaPredicted RBP17.85■□□□□ 0.45
PDGFA-201ENST00000354513 GJB4Q9NTQ9 266 aa17.85■□□□□ 0.45
PDGFA-201ENST00000354513 WRAP73Q9P2S5 460 aaPredicted RBP17.85■□□□□ 0.45
PDGFA-201ENST00000354513 CYP46A1Q9Y6A2 500 aa17.85■□□□□ 0.45
PDGFA-201ENST00000354513 B4GALT3O60512 393 aa17.84■□□□□ 0.45
PDGFA-201ENST00000354513 MAFO75444 373 aaPredicted RBP17.84■□□□□ 0.45
PDGFA-201ENST00000354513 SCRN1Q12765 414 aa17.84■□□□□ 0.45
PDGFA-201ENST00000354513 KSR1Q8IVT5 923 aa17.84■□□□□ 0.45
PDGFA-201ENST00000354513 ZNF579Q8NAF0 562 aaKnown RBP17.84■□□□□ 0.45
PDGFA-201ENST00000354513 LPPQ93052 612 aa17.84■□□□□ 0.45
PDGFA-201ENST00000354513 PHF20Q9BVI0 1012 aa17.84■□□□□ 0.45
PDGFA-201ENST00000354513 C22orf23Q9BZE7 217 aa17.84■□□□□ 0.45
PDGFA-201ENST00000354513 KCNMB3Q9NPA1 279 aa17.84■□□□□ 0.45
PDGFA-201ENST00000354513 ENTPD7Q9NQZ7 604 aa17.84■□□□□ 0.45
PDGFA-201ENST00000354513 NT5C1B-RDH14C9J2C7 533 aa17.83■□□□□ 0.44
PDGFA-201ENST00000354513 EOMESO95936 686 aa17.83■□□□□ 0.44
PDGFA-201ENST00000354513 PPM1AP35813 382 aa17.83■□□□□ 0.44
PDGFA-201ENST00000354513 TECP42680 631 aa17.83■□□□□ 0.44
PDGFA-201ENST00000354513 PHKA2P46019 1235 aa17.83■□□□□ 0.44
PDGFA-201ENST00000354513 ZXDAP98168 799 aa17.83■□□□□ 0.44
PDGFA-201ENST00000354513 NHLH1Q02575 133 aa17.83■□□□□ 0.44
PDGFA-201ENST00000354513 NONOQ15233 471 aaKnown RBP eCLIP17.83■□□□□ 0.44
PDGFA-201ENST00000354513 EARS2Q5JPH6 523 aaKnown RBP17.83■□□□□ 0.44
PDGFA-201ENST00000354513 LLGL2Q6P1M3 1020 aa17.83■□□□□ 0.44
PDGFA-201ENST00000354513 BCL7CQ8WUZ0 217 aaPredicted RBP17.83■□□□□ 0.44
PDGFA-201ENST00000354513 SCLT1Q96NL6 688 aa17.83■□□□□ 0.44
PDGFA-201ENST00000354513 TRAIPQ9BWF2 469 aa17.83■□□□□ 0.44
PDGFA-201ENST00000354513 APOL5Q9BWW9 433 aa17.83■□□□□ 0.44
PDGFA-201ENST00000354513 SPG21Q9NZD8 308 aa17.83■□□□□ 0.44
PDGFA-201ENST00000354513 DDX25Q9UHL0 483 aaKnown RBP17.83■□□□□ 0.44
PDGFA-201ENST00000354513 FSD2A1L4K1 749 aa17.82■□□□□ 0.44
PDGFA-201ENST00000354513 C2orf71A6NGG8 1288 aa17.82■□□□□ 0.44
PDGFA-201ENST00000354513 BCAR1P56945 870 aa17.82■□□□□ 0.44
PDGFA-201ENST00000354513 PPP2R5CQ13362 524 aa17.82■□□□□ 0.44
PDGFA-201ENST00000354513 GALNT17Q6IS24 598 aa17.82■□□□□ 0.44
PDGFA-201ENST00000354513 TRIM67Q6ZTA4 783 aa17.82■□□□□ 0.44
PDGFA-201ENST00000354513 BMP8AQ7Z5Y6 402 aa17.82■□□□□ 0.44
PDGFA-201ENST00000354513 ZNF410Q86VK4 478 aa17.82■□□□□ 0.44
PDGFA-201ENST00000354513 ABI1Q8IZP0 508 aa17.82■□□□□ 0.44
PDGFA-201ENST00000354513 FAM177A1Q8N128 213 aaPredicted RBP17.82■□□□□ 0.44
PDGFA-201ENST00000354513 FEZF2Q8TBJ5 459 aa17.82■□□□□ 0.44
PDGFA-201ENST00000354513 OXER1Q8TDS5 423 aa17.82■□□□□ 0.44
PDGFA-201ENST00000354513 RPGRIP1Q96KN7 1286 aa17.82■□□□□ 0.44
PDGFA-201ENST00000354513 GCOM2Q9BZD3 368 aaPredicted RBP17.82■□□□□ 0.44
PDGFA-201ENST00000354513 IFT122Q9HBG6 1241 aa17.82■□□□□ 0.44
PDGFA-201ENST00000354513 NGRNQ9NPE2 291 aaKnown RBP17.82■□□□□ 0.44
PDGFA-201ENST00000354513 SUCLA2Q9P2R7 463 aaPredicted RBP17.82■□□□□ 0.44
PDGFA-201ENST00000354513 MYO10Q9HD67 2058 aa17.82■□□□□ 0.44
PDGFA-201ENST00000354513 STK36Q9NRP7 1315 aa17.82■□□□□ 0.44
PDGFA-201ENST00000354513 FAM205CA6NFA0 338 aa17.81■□□□□ 0.44
PDGFA-201ENST00000354513 TMEM221A6NGB7 291 aa17.81■□□□□ 0.44
PDGFA-201ENST00000354513 DDX11L8A8MPP1 907 aa17.81■□□□□ 0.44
PDGFA-201ENST00000354513 M0R296 226 aa17.81■□□□□ 0.44
PDGFA-201ENST00000354513 CPLX1O14810 134 aa17.81■□□□□ 0.44
PDGFA-201ENST00000354513 CTDNEP1O95476 244 aa17.81■□□□□ 0.44
PDGFA-201ENST00000354513 NPEPPSP55786 919 aa17.81■□□□□ 0.44
PDGFA-201ENST00000354513 LONRF3Q496Y0 759 aa17.81■□□□□ 0.44
PDGFA-201ENST00000354513 KRT25Q7Z3Z0 450 aa17.81■□□□□ 0.44
PDGFA-201ENST00000354513 ALYREFQ86V81 257 aaKnown RBP17.81■□□□□ 0.44
PDGFA-201ENST00000354513 RHPN2Q8IUC4 686 aa17.81■□□□□ 0.44
PDGFA-201ENST00000354513 PRSS33Q8NF86 280 aa17.81■□□□□ 0.44
PDGFA-201ENST00000354513 HAS1Q92839 578 aa17.81■□□□□ 0.44
PDGFA-201ENST00000354513 VN1R3Q9BXE9 311 aa17.81■□□□□ 0.44
PDGFA-201ENST00000354513 ZBP1Q9H171 429 aa17.81■□□□□ 0.44
PDGFA-201ENST00000354513 CHST12Q9NRB3 414 aa17.81■□□□□ 0.44
PDGFA-201ENST00000354513 PDRG1Q9NUG6 133 aa17.81■□□□□ 0.44
PDGFA-201ENST00000354513 DACT1Q9NYF0 836 aa17.81■□□□□ 0.44
PDGFA-201ENST00000354513 HCFC2Q9Y5Z7 792 aa17.81■□□□□ 0.44
PDGFA-201ENST00000354513 CLASP2O75122 1294 aaKnown RBP17.8■□□□□ 0.44
PDGFA-201ENST00000354513 PSMC5P62195 406 aa17.8■□□□□ 0.44
PDGFA-201ENST00000354513 SPIRE1Q08AE8 756 aa17.8■□□□□ 0.44
PDGFA-201ENST00000354513 SMC1AQ14683 1233 aaKnown RBP17.8■□□□□ 0.44
PDGFA-201ENST00000354513 LETM2Q2VYF4 491 aa17.8■□□□□ 0.44
PDGFA-201ENST00000354513 TMC7Q7Z402 723 aa17.8■□□□□ 0.44
PDGFA-201ENST00000354513 MRPL43Q8N983 215 aaKnown RBP17.8■□□□□ 0.44
PDGFA-201ENST00000354513 AUTS2Q8WXX7 1259 aa17.8■□□□□ 0.44
PDGFA-201ENST00000354513 ASIC4Q96FT7 647 aa17.8■□□□□ 0.44
PDGFA-201ENST00000354513 KCNH6Q9H252 994 aa17.8■□□□□ 0.44
PDGFA-201ENST00000354513 NRDE2Q9H7Z3 1164 aa17.8■□□□□ 0.44
PDGFA-201ENST00000354513 MINDY3Q9H8M7 445 aa17.8■□□□□ 0.44
PDGFA-201ENST00000354513 CYP26B1Q9NR63 512 aa17.8■□□□□ 0.44
PDGFA-201ENST00000354513 FAM105AQ9NUU6 356 aa17.8■□□□□ 0.44
PDGFA-201ENST00000354513 TBC1D13Q9NVG8 400 aa17.8■□□□□ 0.44
PDGFA-201ENST00000354513 PUF60Q9UHX1 559 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms