RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 EHMT1Q9H9B1 1298 aa5.37□□□□□ -1.55
SKP1-202ENST00000353411 DDX18Q9NVP1 670 aaKnown RBP5.37□□□□□ -1.55
SKP1-202ENST00000353411 GGT7Q9UJ14 662 aa5.37□□□□□ -1.55
SKP1-202ENST00000353411 KNL1Q8NG31 2342 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 CCDC189A1A4V9 331 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 TAF4O00268 1085 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 TTKP33981 857 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 PTDSS1P48651 473 aaKnown RBP5.36□□□□□ -1.55
SKP1-202ENST00000353411 LPCAT2Q7L5N7 544 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 CCDC103Q8IW40 242 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 SPATA5Q8NB90 893 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 LINS1Q8NG48 757 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 CARD14Q9BXL6 1004 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 PHACTR1Q9C0D0 580 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 DCTN4Q9UJW0 460 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 FBXO9Q9UK97 447 aaPredicted RBP5.36□□□□□ -1.55
SKP1-202ENST00000353411 MKL2Q9ULH7 1088 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 DPPA5A6NC42 116 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 FAM13AO94988 1023 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 SLC5A1P13866 664 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 LRRC14Q15048 493 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 P3H1Q32P28 736 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 NXNQ6DKJ4 435 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 ADCK1Q86TW2 530 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 TUBGCP5Q96RT8 1024 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 MYD88Q99836 296 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 PDE4DIPQ5VU43 2346 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 GOLGA8RI6L899 631 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 ZNF185O15231 689 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 PLEKHA7Q6IQ23 1121 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 RHOT2Q8IXI1 618 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 ZNF444Q8N0Y2 327 aaPredicted RBP5.36□□□□□ -1.55
SKP1-202ENST00000353411 CCT6BQ92526 530 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 TATDN2Q93075 761 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 TUBGCP3Q96CW5 907 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 SERPINB12Q96P63 405 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 EDEM3Q9BZQ6 932 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 GPC6Q9Y625 555 aaPredicted RBP5.36□□□□□ -1.55
SKP1-202ENST00000353411 TMEM120BA0PK00 339 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 CNOT3O75175 753 aaKnown RBP5.36□□□□□ -1.55
SKP1-202ENST00000353411 PDE6AP16499 860 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 ABCB4P21439 1286 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 POLGP54098 1239 aaPredicted RBP5.36□□□□□ -1.55
SKP1-202ENST00000353411 USP4Q13107 963 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 SGSM1Q2NKQ1 1148 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 ADAT2Q7Z6V5 191 aaKnown RBP5.36□□□□□ -1.55
SKP1-202ENST00000353411 C1orf131Q8NDD1 294 aaKnown RBP5.36□□□□□ -1.55
SKP1-202ENST00000353411 HIPK4Q8NE63 616 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 RPGRQ92834 1020 aaKnown RBP5.36□□□□□ -1.55
SKP1-202ENST00000353411 MRPL1Q9BYD6 325 aaKnown RBP5.36□□□□□ -1.55
SKP1-202ENST00000353411 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.36□□□□□ -1.55
SKP1-202ENST00000353411 RSL24D1Q9UHA3 163 aaKnown RBP5.36□□□□□ -1.55
SKP1-202ENST00000353411 TUBE1Q9UJT0 475 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 SLC4A4Q9Y6R1 1079 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 A2ML1A8K2U0 1454 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 ALOX5P09917 674 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 RPL5P46777 297 aaKnown RBP5.36□□□□□ -1.55
SKP1-202ENST00000353411 CARSP49589 748 aaKnown RBP5.36□□□□□ -1.55
SKP1-202ENST00000353411 NLRP6P59044 892 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 NONOQ15233 471 aaKnown RBP eCLIP5.36□□□□□ -1.553e-7■■■□□ 16.4
SKP1-202ENST00000353411 KLHL38Q2WGJ6 581 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 RAD9BQ6WBX8 426 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 EME1Q96AY2 570 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 DACT3Q96B18 629 aaPredicted RBP5.36□□□□□ -1.55
SKP1-202ENST00000353411 C1orf50Q9BV19 199 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 RBM12Q9NTZ6 932 aaKnown RBP5.36□□□□□ -1.55
SKP1-202ENST00000353411 RRN3Q9NYV6 651 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 ABCA9Q8IUA7 1624 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 TSPY2A6NKD2 308 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 PENKP01210 267 aaPredicted RBP5.36□□□□□ -1.55
SKP1-202ENST00000353411 MYBL1P10243 752 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 PSMC3P17980 439 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 SCNN1BP51168 640 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 SPIDRQ14159 915 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 GEN1Q17RS7 908 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 SIRT2Q8IXJ6 389 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 DQX1Q8TE96 717 aaKnown RBP5.36□□□□□ -1.55
SKP1-202ENST00000353411 CDKL2Q92772 493 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 BEGAINQ9BUH8 593 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 MAP3K19Q56UN5 1328 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 LAMC1P11047 1609 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 TTC26A0AVF1 554 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 FAAH2Q6GMR7 532 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 CDR2LQ86X02 465 aaPredicted RBP5.36□□□□□ -1.55
SKP1-202ENST00000353411 OSBPL10Q9BXB5 764 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 EBF2Q9HAK2 575 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 UBN1Q9NPG3 1134 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 SAR1AQ9NR31 198 aa5.36□□□□□ -1.55
SKP1-202ENST00000353411 PDLIM1O00151 329 aa5.35□□□□□ -1.55
SKP1-202ENST00000353411 DAPK3O43293 454 aa5.35□□□□□ -1.55
SKP1-202ENST00000353411 EXOC3O60645 756 aa5.35□□□□□ -1.55
SKP1-202ENST00000353411 SERPINB2P05120 415 aa5.35□□□□□ -1.55
SKP1-202ENST00000353411 NCF2P19878 526 aaPredicted RBP5.35□□□□□ -1.55
SKP1-202ENST00000353411 GARSP41250 739 aaKnown RBP5.35□□□□□ -1.55
SKP1-202ENST00000353411 NAPAP54920 295 aa5.35□□□□□ -1.55
SKP1-202ENST00000353411 TMPRSS15P98073 1019 aa5.35□□□□□ -1.55
SKP1-202ENST00000353411 LRRC63Q05C16 580 aa5.35□□□□□ -1.55
SKP1-202ENST00000353411 KRT39Q6A163 491 aa5.35□□□□□ -1.55
SKP1-202ENST00000353411 CYP4F22Q6NT55 531 aa5.35□□□□□ -1.55
SKP1-202ENST00000353411 APOA5Q6Q788 366 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms