RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 ZNF569Q5MCW4 686 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 SFMBT2Q5VUG0 894 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 GBP6Q6ZN66 633 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 MAEAQ7L5Y9 396 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 CACNA2D4Q7Z3S7 1137 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 NCAPG2Q86XI2 1143 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 MAP4K3Q8IVH8 894 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 SLC35F6Q8N357 371 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 LRRN4CLQ8ND94 238 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 MCPH1Q8NEM0 835 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 GTF3C2Q8WUA4 911 aaPredicted RBP7.57□□□□□ -1.2
TRIM55-203ENST00000350034 BSNDQ8WZ55 320 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 JAKMIP2Q96AA8 810 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 CEP170P1Q96L14 293 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 CCDC42Q96M95 316 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 PCYT2Q99447 389 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 CRACR2AQ9BSW2 395 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 NIFKQ9BYG3 293 aaKnown RBP7.57□□□□□ -1.2
TRIM55-203ENST00000350034 LACRTQ9GZZ8 138 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 NLRC4Q9NPP4 1024 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 CYP26B1Q9NR63 512 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 TRIM10Q9UDY6 481 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 USP20Q9Y2K6 914 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 FRMD4BQ9Y2L6 1034 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 SLC45A1Q9Y2W3 748 aa7.57□□□□□ -1.2
TRIM55-203ENST00000350034 CTAGE9A4FU28 777 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 SLC16A4O15374 487 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 P4HA2O15460 535 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 KRT86O43790 486 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 ACTN1P12814 892 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 ANXA13P27216 316 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 FMO5P49326 533 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 CYP2J2P51589 502 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 FKBP1BP68106 108 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 PRKCEQ02156 737 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 CYP27A1Q02318 531 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 BFSP1Q12934 665 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 DMP1Q13316 513 aaPredicted RBP7.56□□□□□ -1.2
TRIM55-203ENST00000350034 SNAPC2Q13487 334 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 TTLL12Q14166 644 aaPredicted RBP7.56□□□□□ -1.2
TRIM55-203ENST00000350034 NEDD9Q14511 834 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 NAA30Q147X3 362 aaPredicted RBP7.56□□□□□ -1.2
TRIM55-203ENST00000350034 SPA17Q15506 151 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 TARBP2Q15633 366 aaKnown RBP7.56□□□□□ -1.2
TRIM55-203ENST00000350034 SLC9C1Q4G0N8 1177 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 DCAF17Q5H9S7 520 aaPredicted RBP7.56□□□□□ -1.2
TRIM55-203ENST00000350034 C1orf220Q5T0J3 134 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 CCDC122Q5T0U0 273 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 FAM102BQ5T8I3 360 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 INTS8Q75QN2 995 aaKnown RBP7.56□□□□□ -1.2
TRIM55-203ENST00000350034 IRF2BP2Q7Z5L9 587 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 KIAA1328Q86T90 577 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 SYCP3Q8IZU3 236 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 EHBP1Q8NDI1 1231 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 LMO3Q8TAP4 145 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 AFAP1L1Q8TED9 768 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 FBXL18Q96ME1 805 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 CCDC43Q96MW1 224 aaKnown RBP7.56□□□□□ -1.2
TRIM55-203ENST00000350034 NAPGQ99747 312 aaPredicted RBP7.56□□□□□ -1.2
TRIM55-203ENST00000350034 SH2D3AQ9BRG2 576 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 CBWD1Q9BRT8 395 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 PAGR1Q9BTK6 254 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 TSGA10Q9BZW7 698 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 MROH8Q9H579 483 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 DHX33Q9H6R0 707 aaKnown RBP7.56□□□□□ -1.2
TRIM55-203ENST00000350034 ATP6V0A4Q9HBG4 840 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 ARHGAP28Q9P2N2 729 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 KCNG1Q9UIX4 513 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 CDC23Q9UJX2 597 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 AJAP1Q9UKB5 411 aaPredicted RBP7.56□□□□□ -1.2
TRIM55-203ENST00000350034 TBX20Q9UMR3 447 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 NENFQ9UMX5 172 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 EXOC7Q9UPT5 735 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 PPME1Q9Y570 386 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 PCDHA13Q9Y5I0 950 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 FHOD1Q9Y613 1164 aa7.56□□□□□ -1.2
TRIM55-203ENST00000350034 ATP8B3O60423 1300 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 SCN4AP35499 1836 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 EFCAB8A8MWE9 144 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 TISP43B9A030 160 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 ANKRD63C9JTQ0 380 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 H0YCG3 227 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 AKR1B10O60218 316 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 EXOC3O60645 756 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 N4BP1O75113 896 aaKnown RBP7.55□□□□□ -1.2
TRIM55-203ENST00000350034 LGR5O75473 907 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 IPO7O95373 1038 aaKnown RBP7.55□□□□□ -1.2
TRIM55-203ENST00000350034 PIGRP01833 764 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 OATP04181 439 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 SCP2P22307 547 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 ADSSP30520 456 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 ABCD1P33897 745 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 ARL2P36404 184 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 VAMP7P51809 220 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 SMTNP53814 917 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 ASIC2Q16515 512 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 SLC18A3Q16572 532 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 CBWD6Q4V339 395 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 EAPPQ56P03 285 aaPredicted RBP7.55□□□□□ -1.2
TRIM55-203ENST00000350034 CBWD3Q5JTY5 395 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms