RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 C17orf75Q9HAS0 396 aa18.2■□□□□ 0.5
SAMM50-201ENST00000350028 GABBR1Q9UBS5 961 aa18.2■□□□□ 0.5
SAMM50-201ENST00000350028 SALL4Q9UJQ4 1053 aa18.2■□□□□ 0.5
SAMM50-201ENST00000350028 HYOU1Q9Y4L1 999 aa18.2■□□□□ 0.5
SAMM50-201ENST00000350028 KIAA1217Q5T5P2 1943 aa18.2■□□□□ 0.5
SAMM50-201ENST00000350028 TMEM150BA6NC51 233 aa18.2■□□□□ 0.5
SAMM50-201ENST00000350028 P4HA2O15460 535 aa18.2■□□□□ 0.5
SAMM50-201ENST00000350028 GRIN3BO60391 1043 aa18.2■□□□□ 0.5
SAMM50-201ENST00000350028 ERLIN1O75477 346 aa18.2■□□□□ 0.5
SAMM50-201ENST00000350028 MYL7Q01449 175 aa18.2■□□□□ 0.5
SAMM50-201ENST00000350028 VGLL4Q14135 290 aa18.2■□□□□ 0.5
SAMM50-201ENST00000350028 ENOX2Q16206 610 aaKnown RBP18.2■□□□□ 0.5
SAMM50-201ENST00000350028 FAM102BQ5T8I3 360 aa18.2■□□□□ 0.5
SAMM50-201ENST00000350028 PLA2G4FQ68DD2 849 aa18.2■□□□□ 0.5
SAMM50-201ENST00000350028 ANO5Q75V66 913 aa18.2■□□□□ 0.5
SAMM50-201ENST00000350028 XXYLT1Q8NBI6 393 aa18.2■□□□□ 0.5
SAMM50-201ENST00000350028 NOA1Q8NC60 698 aaKnown RBP18.2■□□□□ 0.5
SAMM50-201ENST00000350028 DNERQ8NFT8 737 aa18.2■□□□□ 0.5
SAMM50-201ENST00000350028 CAGE1Q8TC20 777 aa18.2■□□□□ 0.5
SAMM50-201ENST00000350028 KIFAP3Q92845 792 aa18.2■□□□□ 0.5
SAMM50-201ENST00000350028 DCPSQ96C86 337 aaKnown RBP18.2■□□□□ 0.5
SAMM50-201ENST00000350028 INTS2Q9H0H0 1204 aaKnown RBP18.2■□□□□ 0.5
SAMM50-201ENST00000350028 JPH1Q9HDC5 661 aaPredicted RBP18.2■□□□□ 0.5
SAMM50-201ENST00000350028 SLC9A2Q9UBY0 812 aa18.2■□□□□ 0.5
SAMM50-201ENST00000350028 LOC285556D6RIA3 1793 aa18.19■□□□□ 0.5
SAMM50-201ENST00000350028 WDR81Q562E7 1941 aa18.19■□□□□ 0.5
SAMM50-201ENST00000350028 SLC16A4O15374 487 aa18.19■□□□□ 0.5
SAMM50-201ENST00000350028 RHOXF2BP0C7M4 288 aa18.19■□□□□ 0.5
SAMM50-201ENST00000350028 TRIM49P0CI25 452 aa18.19■□□□□ 0.5
SAMM50-201ENST00000350028 TRIM49CP0CI26 452 aa18.19■□□□□ 0.5
SAMM50-201ENST00000350028 RFX1P22670 979 aa18.19■□□□□ 0.5
SAMM50-201ENST00000350028 NAP1L1P55209 391 aaKnown RBP18.19■□□□□ 0.5
SAMM50-201ENST00000350028 KIAA0753Q2KHM9 967 aa18.19■□□□□ 0.5
SAMM50-201ENST00000350028 SPIRE2Q8WWL2 714 aa18.19■□□□□ 0.5
SAMM50-201ENST00000350028 VTI1AQ96AJ9 217 aa18.19■□□□□ 0.5
SAMM50-201ENST00000350028 CAPZA3Q96KX2 299 aa18.19■□□□□ 0.5
SAMM50-201ENST00000350028 RHOXF2Q9BQY4 288 aa18.19■□□□□ 0.5
SAMM50-201ENST00000350028 GPRC5CQ9NQ84 441 aa18.19■□□□□ 0.5
SAMM50-201ENST00000350028 FBXO40Q9UH90 709 aa18.19■□□□□ 0.5
SAMM50-201ENST00000350028 DNAJC12Q9UKB3 198 aa18.19■□□□□ 0.5
SAMM50-201ENST00000350028 AJAP1Q9UKB5 411 aaPredicted RBP18.19■□□□□ 0.5
SAMM50-201ENST00000350028 CSADQ9Y600 493 aa18.19■□□□□ 0.5
SAMM50-201ENST00000350028 MYH10P35580 1976 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 DDNO94850 711 aaPredicted RBP18.18■□□□□ 0.5
SAMM50-201ENST00000350028 SEC31AO94979 1220 aaKnown RBP18.18■□□□□ 0.5
SAMM50-201ENST00000350028 STBD1O95210 358 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 CCDC172P0C7W6 258 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 KLRC1P26715 233 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 ICAM3P32942 547 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 SOX5P35711 763 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 VAMP7P51809 220 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 MCCD1P59942 119 aaPredicted RBP18.18■□□□□ 0.5
SAMM50-201ENST00000350028 CETN1Q12798 172 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 CBWD6Q4V339 395 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 CBWD3Q5JTY5 395 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 CBWD5Q5RIA9 395 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 LBX2Q6XYB7 198 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 ZNF572Q7Z3I7 529 aaPredicted RBP18.18■□□□□ 0.5
SAMM50-201ENST00000350028 RDH13Q8NBN7 331 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 CEP170P1Q96L14 293 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 SH2D3AQ9BRG2 576 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 NTPCRQ9BSD7 190 aaKnown RBP18.18■□□□□ 0.5
SAMM50-201ENST00000350028 PCIF1Q9H4Z3 704 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 HSPBP1Q9NZL4 362 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 BUB1O43683 1085 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 ZNF862O60290 1169 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 MCM3P25205 808 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 ITIH3Q06033 890 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 DMP1Q13316 513 aaPredicted RBP18.18■□□□□ 0.5
SAMM50-201ENST00000350028 STXBP2Q15833 593 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 SWSAP1Q6NVH7 229 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 MIS18BP1Q6P0N0 1132 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 WDR93Q6P2C0 686 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 GJB7Q6PEY0 223 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 ABHD15Q6UXT9 468 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 SULF1Q8IWU6 871 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 MCPH1Q8NEM0 835 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 OSBPL9Q96SU4 736 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 PNKPQ96T60 521 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 NAGPAQ9UK23 515 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 INTUQ9ULD6 942 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 TBX20Q9UMR3 447 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 NENFQ9UMX5 172 aa18.18■□□□□ 0.5
SAMM50-201ENST00000350028 PFASO15067 1338 aa18.17■□□□□ 0.5
SAMM50-201ENST00000350028 CCDC169A6NNP5 214 aa18.17■□□□□ 0.5
SAMM50-201ENST00000350028 ZNF185O15231 689 aa18.17■□□□□ 0.5
SAMM50-201ENST00000350028 PMM2O15305 246 aa18.17■□□□□ 0.5
SAMM50-201ENST00000350028 EIF3JO75822 258 aaKnown RBP18.17■□□□□ 0.5
SAMM50-201ENST00000350028 DGAT1O75907 488 aa18.17■□□□□ 0.5
SAMM50-201ENST00000350028 RTP1P59025 263 aa18.17■□□□□ 0.5
SAMM50-201ENST00000350028 ACTR2P61160 394 aa18.17■□□□□ 0.5
SAMM50-201ENST00000350028 DRAP1Q14919 205 aaPredicted RBP18.17■□□□□ 0.5
SAMM50-201ENST00000350028 IFI16Q16666 785 aaKnown RBP18.17■□□□□ 0.5
SAMM50-201ENST00000350028 ALKBH5Q6P6C2 394 aaKnown RBP18.17■□□□□ 0.5
SAMM50-201ENST00000350028 RIOX2Q8IUF8 465 aa18.17■□□□□ 0.5
SAMM50-201ENST00000350028 CREG2Q8IUH2 290 aa18.17■□□□□ 0.5
SAMM50-201ENST00000350028 TMEM161BQ8NDZ6 487 aa18.17■□□□□ 0.5
SAMM50-201ENST00000350028 CBWD1Q9BRT8 395 aa18.17■□□□□ 0.5
SAMM50-201ENST00000350028 KMT5AQ9NQR1 393 aa18.17■□□□□ 0.5
SAMM50-201ENST00000350028 APEX2Q9UBZ4 518 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms