RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 SOAT1P35610 550 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 CENPAP49450 140 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 MEOX1P50221 254 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 CTAGE6Q86UF2 777 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 CTAGE4Q8IX94 777 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 SYNE4Q8N205 404 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 OTUD7AQ8TE49 926 aaPredicted RBP6.45□□□□□ -1.38
RFC1-201ENST00000349703 RABGGTAQ92696 567 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 GJD4Q96KN9 370 aaPredicted RBP6.45□□□□□ -1.38
RFC1-201ENST00000349703 TACO1Q9BSH4 297 aaKnown RBP6.45□□□□□ -1.38
RFC1-201ENST00000349703 GALNT8Q9NY28 637 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 PSD3Q9NYI0 1048 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 IL1RAPL1Q9NZN1 696 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 JAG2Q9Y219 1238 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 PCDHGB2Q9Y5G2 931 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 SOS1Q07889 1333 aaPredicted RBP6.45□□□□□ -1.38
RFC1-201ENST00000349703 PREX2Q70Z35 1606 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 A0A096LPE4 126 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 CCDC196A0A1B0GTZ2 297 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 A0A1W2PPZ6 126 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 BLACEA4D250 179 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 PODXLO00592 558 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 DGKIO75912 1065 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 CCDC130P13994 396 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 DCTN2Q13561 401 aaKnown RBP6.45□□□□□ -1.38
RFC1-201ENST00000349703 IQCB1Q15051 598 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 RRAGBQ5VZM2 374 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 RRAGAQ7L523 313 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 CHST3Q7LGC8 479 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 CCDC13Q8IYE1 715 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 RTKN2Q8IZC4 609 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 TSNARE1Q96NA8 513 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 AP5M1Q9H0R1 490 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 ZFYVE28Q9HCC9 887 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 MED4Q9NPJ6 270 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 EVA1BQ9NVM1 165 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 UBAP1Q9NZ09 502 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 RIMS2Q9UQ26 1411 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 SGSM2O43147 1006 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 LILRB5O75023 590 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 HPDP32754 393 aaPredicted RBP6.44□□□□□ -1.38
RFC1-201ENST00000349703 HLTFQ14527 1009 aaKnown RBP eCLIP6.44□□□□□ -1.381e-6■■■□□ 14.6
RFC1-201ENST00000349703 PDE12Q6L8Q7 609 aaKnown RBP6.44□□□□□ -1.38
RFC1-201ENST00000349703 SPATC1Q76KD6 591 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 IL22RA1Q8N6P7 574 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 C8orf58Q8NAV2 365 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 FAM71BQ8TC56 605 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 MARVELD3Q96A59 401 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 PPP1R13BQ96KQ4 1090 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 PHF20Q9BVI0 1012 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 CARD6Q9BX69 1037 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 KIAA0232Q92628 1395 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 RPAP1Q9BWH6 1393 aaPredicted RBP6.44□□□□□ -1.38
RFC1-201ENST00000349703 CDC42BPBQ9Y5S2 1711 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 SAMD9LQ8IVG5 1584 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 SNAP23O00161 211 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 ARHGAP6O43182 974 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 FKBP9O95302 570 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 WEE1P30291 646 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 UBASH3AP57075 661 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 MAP3K10Q02779 954 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 KCNC4Q03721 635 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 TBX2Q13207 712 aaPredicted RBP6.44□□□□□ -1.38
RFC1-201ENST00000349703 AP3B2Q13367 1082 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 SH3PXD2AQ5TCZ1 1133 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 FKBP9P1Q75LS8 142 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 GPRIN1Q7Z2K8 1008 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 PLEKHH3Q7Z736 793 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 ATP11CQ8NB49 1132 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 DNAAF1Q8NEP3 725 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 CALML6Q8TD86 181 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 RNPC3Q96LT9 517 aaKnown RBP6.44□□□□□ -1.38
RFC1-201ENST00000349703 DHRS4Q9BTZ2 278 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 CARD10Q9BWT7 1032 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 INTS13Q9NVM9 706 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 REV1Q9UBZ9 1251 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 CHKBQ9Y259 395 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 TNPO3Q9Y5L0 923 aaKnown RBP6.44□□□□□ -1.38
RFC1-201ENST00000349703 TARBP1Q13395 1621 aaKnown RBP6.44□□□□□ -1.38
RFC1-201ENST00000349703 NPHP3-ACAD11A0A0J9YXS1 232 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 SLC10A3P09131 477 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 CLEC2LP0C7M8 214 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 MSH2P43246 934 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 CKAP4Q07065 602 aaKnown RBP6.44□□□□□ -1.38
RFC1-201ENST00000349703 MAPK7Q13164 816 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 PABPC4Q13310 644 aaKnown RBP eCLIP6.44□□□□□ -1.38
RFC1-201ENST00000349703 TTC39AQ5SRH9 613 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 FAM69AQ5T7M9 428 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 CDCA2Q69YH5 1023 aaPredicted RBP6.44□□□□□ -1.38
RFC1-201ENST00000349703 MCTP2Q6DN12 878 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 B4GALNT4Q76KP1 1039 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 DHX32Q7L7V1 743 aaKnown RBP6.44□□□□□ -1.38
RFC1-201ENST00000349703 TAX1BP1Q86VP1 789 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 SESTD1Q86VW0 696 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 ATP6V0A1Q93050 837 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 ACE2Q9BYF1 805 aaPredicted RBP6.44□□□□□ -1.38
RFC1-201ENST00000349703 IFNKQ9P0W0 207 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 SPHKAPQ2M3C7 1700 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 SLC12A8A0AV02 714 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 FCHO1O14526 889 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms