RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 GALCP54803 685 aa11.24□□□□□ -0.61
SMG7-201ENST00000347615 SLC12A1Q13621 1099 aa11.24□□□□□ -0.61
SMG7-201ENST00000347615 ADAM22Q9P0K1 906 aa11.24□□□□□ -0.61
SMG7-201ENST00000347615 AFG3L2Q9Y4W6 797 aa11.24□□□□□ -0.61
SMG7-201ENST00000347615 MROH2AA6NES4 1674 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 ESRRAP11474 423 aaPredicted RBP11.23□□□□□ -0.61
SMG7-201ENST00000347615 GLE1Q53GS7 698 aaKnown RBP11.23□□□□□ -0.61
SMG7-201ENST00000347615 RBM43Q6ZSC3 357 aaKnown RBP11.23□□□□□ -0.61
SMG7-201ENST00000347615 TRIM59Q8IWR1 403 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 GUF1Q8N442 669 aaKnown RBP11.23□□□□□ -0.61
SMG7-201ENST00000347615 ATXN7L3BQ96GX2 97 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 HEXIM2Q96MH2 286 aaKnown RBP11.23□□□□□ -0.61
SMG7-201ENST00000347615 LSP1P33241 339 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 TRIM65Q6PJ69 517 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 CNKSR1Q969H4 720 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 C9orf72Q96LT7 481 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 CFAP57Q96MR6 1250 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 KLF6Q99612 283 aaPredicted RBP11.23□□□□□ -0.61
SMG7-201ENST00000347615 LXNQ9BS40 222 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 MSTO1Q9BUK6 570 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 TMEM206Q9H813 350 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 A6NJR5 290 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 C21orf2O43822 256 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 PSMA2P25787 234 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 VAMP7P51809 220 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 KRT17Q04695 432 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 GPS1Q13098 491 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 NFIXQ14938 502 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 AOC3Q16853 763 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 MMEL1Q495T6 779 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 MCF2L2Q86YR7 1114 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 DTX3LQ8TDB6 740 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 SLC7A3Q8WY07 619 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 CHMP6Q96FZ7 201 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 DMGDHQ9UI17 866 aaKnown RBP11.23□□□□□ -0.61
SMG7-201ENST00000347615 DEPDC5O75140 1603 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 PVALEFA0A1B0GWK0 134 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 F5H6K3 240 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 MCF2LO15068 1137 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 MX2P20592 715 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 KLRC3Q07444 240 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 TMED8Q6PL24 325 aaPredicted RBP11.23□□□□□ -0.61
SMG7-201ENST00000347615 CEP120Q8N960 986 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 RMDN2Q96LZ7 410 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 WDR11Q9BZH6 1224 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 EPN3Q9H201 632 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 FAM205AQ6ZU69 1335 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 PNPLA7Q6ZV29 1317 aa11.23□□□□□ -0.61
SMG7-201ENST00000347615 COL3A1P02461 1466 aaPredicted RBP11.23□□□□□ -0.61
SMG7-201ENST00000347615 DENND3A2RUS2 1198 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 RHOBTB3O94955 611 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 IL1RL1Q01638 556 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 TAF12Q16514 161 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 LRRC36Q1X8D7 754 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 SLC27A3Q5K4L6 730 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 PPP1R18Q6NYC8 613 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 C4orf33Q8N1A6 199 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 ABTB1Q969K4 478 aaPredicted RBP11.22□□□□□ -0.61
SMG7-201ENST00000347615 PPARGC1AQ9UBK2 798 aaKnown RBP11.22□□□□□ -0.61
SMG7-201ENST00000347615 CCDC188H7C350 402 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 GSTA1P08263 222 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 GSTA2P09210 222 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 UCHL3P15374 230 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 NBPF9Q3BBW0 867 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 DNAAF3Q8N9W5 541 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 CASKIN2Q8WXE0 1202 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 DHX36Q9H2U1 1008 aaKnown RBP11.22□□□□□ -0.61
SMG7-201ENST00000347615 NGRNQ9NPE2 291 aaKnown RBP11.22□□□□□ -0.61
SMG7-201ENST00000347615 CFAP69A5D8W1 941 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 RSPH10B2B2RC85 870 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 MEFVO15553 781 aaPredicted RBP11.22□□□□□ -0.61
SMG7-201ENST00000347615 RSPH10BP0C881 870 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 MTMR1Q13613 665 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 DDX27Q96GQ7 796 aaKnown RBP11.22□□□□□ -0.61
SMG7-201ENST00000347615 TACC3Q9Y6A5 838 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 PIK3C2BO00750 1634 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 CLTCQ00610 1675 aaKnown RBP11.22□□□□□ -0.61
SMG7-201ENST00000347615 hCG_2014768A0A024R1R8 64 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 EVI5O60447 810 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 CSF1RP07333 972 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 EIF3BP55884 814 aaKnown RBP11.22□□□□□ -0.61
SMG7-201ENST00000347615 SLC18A3Q16572 532 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 FAM47CQ5HY64 1035 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 DEPDC1BQ8WUY9 529 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 FAF2Q96CS3 445 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 PI4K2AQ9BTU6 479 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 SPZ1Q9BXG8 430 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 CYP4F11Q9HBI6 524 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 STK32BQ9NY57 414 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 CASQ2O14958 399 aaPredicted RBP11.22□□□□□ -0.61
SMG7-201ENST00000347615 CHUKO15111 745 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 SOX5P35711 763 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 ATXN3P54252 364 aaPredicted RBP11.22□□□□□ -0.61
SMG7-201ENST00000347615 RPS6KA2Q15349 733 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 PDXDC2PQ6P474 469 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 GIMAP8Q8ND71 665 aaPredicted RBP11.22□□□□□ -0.61
SMG7-201ENST00000347615 SPDL1Q96EA4 605 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 HPSEQ9Y251 543 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 IVNS1ABPQ9Y6Y0 642 aa11.22□□□□□ -0.61
SMG7-201ENST00000347615 TARSL2A2RTX5 802 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms