RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 IZUMO3Q5VZ72 239 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 ADPGKQ9BRR6 497 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 TRIM51Q9BSJ1 452 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 VCPKMTQ9H867 229 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 RBM43Q6ZSC3 357 aaKnown RBP18.63■□□□□ 0.57
SPAST-202ENST00000345662 APLFQ8IW19 511 aaPredicted RBP18.63■□□□□ 0.57
SPAST-202ENST00000345662 ANKRD36BP1Q96IX9 119 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 TRABDQ9H4I3 376 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 SMARCAL1Q9NZC9 954 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 EHD2Q9NZN4 543 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 SAMD9LQ8IVG5 1584 aa18.62■□□□□ 0.57
SPAST-202ENST00000345662 UGGT1Q9NYU2 1555 aa18.62■□□□□ 0.57
SPAST-202ENST00000345662 KRT17Q04695 432 aa18.62■□□□□ 0.57
SPAST-202ENST00000345662 NUDCD3Q8IVD9 361 aa18.62■□□□□ 0.57
SPAST-202ENST00000345662 ZWILCHQ9H900 591 aa18.62■□□□□ 0.57
SPAST-202ENST00000345662 CYP4F11Q9HBI6 524 aa18.62■□□□□ 0.57
SPAST-202ENST00000345662 ABCB5Q2M3G0 1257 aa18.62■□□□□ 0.57
SPAST-202ENST00000345662 CATSPER1Q8NEC5 780 aa18.62■□□□□ 0.57
SPAST-202ENST00000345662 ANO3Q9BYT9 981 aa18.62■□□□□ 0.57
SPAST-202ENST00000345662 SPC25Q9HBM1 224 aa18.62■□□□□ 0.57
SPAST-202ENST00000345662 SFI1A8K8P3 1242 aa18.62■□□□□ 0.57
SPAST-202ENST00000345662 NLRP10Q86W26 655 aa18.62■□□□□ 0.57
SPAST-202ENST00000345662 DLGAP2Q9P1A6 1054 aa18.62■□□□□ 0.57
SPAST-202ENST00000345662 GOLGA8IPA6NC78 632 aa18.62■□□□□ 0.57
SPAST-202ENST00000345662 GOLGA8JA6NMD2 632 aa18.62■□□□□ 0.57
SPAST-202ENST00000345662 KPNA7A9QM74 516 aa18.62■□□□□ 0.57
SPAST-202ENST00000345662 AP5Z1O43299 807 aa18.62■□□□□ 0.57
SPAST-202ENST00000345662 ING2Q9H160 280 aa18.62■□□□□ 0.57
SPAST-202ENST00000345662 NRBP2Q9NSY0 501 aa18.62■□□□□ 0.57
SPAST-202ENST00000345662 CCPG1Q9ULG6 757 aa18.62■□□□□ 0.57
SPAST-202ENST00000345662 E9PMD0 336 aa18.61■□□□□ 0.57
SPAST-202ENST00000345662 GPS1Q13098 491 aa18.61■□□□□ 0.57
SPAST-202ENST00000345662 NAALADL2Q58DX5 795 aa18.61■□□□□ 0.57
SPAST-202ENST00000345662 ERICH1Q86X53 443 aa18.61■□□□□ 0.57
SPAST-202ENST00000345662 SEPT9Q9UHD8 586 aaPredicted RBP18.61■□□□□ 0.57
SPAST-202ENST00000345662 PSMA2P25787 234 aa18.61■□□□□ 0.57
SPAST-202ENST00000345662 MARK3P27448 753 aa18.61■□□□□ 0.57
SPAST-202ENST00000345662 SERPINB4P48594 390 aa18.61■□□□□ 0.57
SPAST-202ENST00000345662 THOC5Q13769 683 aaKnown RBP18.61■□□□□ 0.57
SPAST-202ENST00000345662 C1orf54Q8WWF1 131 aa18.61■□□□□ 0.57
SPAST-202ENST00000345662 LCMT1Q9UIC8 334 aa18.61■□□□□ 0.57
SPAST-202ENST00000345662 MROH7-TTC4A0A0A0MT08 1334 aa18.61■□□□□ 0.57
SPAST-202ENST00000345662 CCDC195A0A1B0GUA6 201 aa18.61■□□□□ 0.57
SPAST-202ENST00000345662 CA8P35219 290 aa18.61■□□□□ 0.57
SPAST-202ENST00000345662 CTTNQ14247 550 aaKnown RBP18.61■□□□□ 0.57
SPAST-202ENST00000345662 TRAPPC11Q7Z392 1133 aa18.61■□□□□ 0.57
SPAST-202ENST00000345662 PPM1NQ8N819 430 aa18.61■□□□□ 0.57
SPAST-202ENST00000345662 RNF103-CHMP3A0A140T963 221 aa18.61■□□□□ 0.57
SPAST-202ENST00000345662 ANXA13P27216 316 aa18.61■□□□□ 0.57
SPAST-202ENST00000345662 CEP19Q96LK0 163 aa18.61■□□□□ 0.57
SPAST-202ENST00000345662 DBR1Q9UK59 544 aaKnown RBP18.61■□□□□ 0.57
SPAST-202ENST00000345662 PPP1R12AO14974 1030 aaPredicted RBP18.6■□□□□ 0.57
SPAST-202ENST00000345662 RFX1P22670 979 aa18.6■□□□□ 0.57
SPAST-202ENST00000345662 SUPT20HQ8NEM7 779 aa18.6■□□□□ 0.57
SPAST-202ENST00000345662 RNF25Q96BH1 459 aaPredicted RBP18.6■□□□□ 0.57
SPAST-202ENST00000345662 COPS2P61201 443 aa18.6■□□□□ 0.57
SPAST-202ENST00000345662 LONRF1Q17RB8 773 aa18.6■□□□□ 0.57
SPAST-202ENST00000345662 HP1BP3Q5SSJ5 553 aaPredicted RBP18.6■□□□□ 0.57
SPAST-202ENST00000345662 RSPH3Q86UC2 560 aa18.6■□□□□ 0.57
SPAST-202ENST00000345662 ELOA2Q8IYF1 753 aaPredicted RBP18.6■□□□□ 0.57
SPAST-202ENST00000345662 POLR3CQ9BUI4 534 aaPredicted RBP18.6■□□□□ 0.57
SPAST-202ENST00000345662 DONSONQ9NYP3 566 aa18.6■□□□□ 0.57
SPAST-202ENST00000345662 PHF2O75151 1096 aa18.6■□□□□ 0.57
SPAST-202ENST00000345662 CD58P19256 250 aa18.6■□□□□ 0.57
SPAST-202ENST00000345662 SOX5P35711 763 aa18.6■□□□□ 0.57
SPAST-202ENST00000345662 SCNN1DP51172 638 aa18.6■□□□□ 0.57
SPAST-202ENST00000345662 TAF1BQ53T94 588 aaPredicted RBP18.6■□□□□ 0.57
SPAST-202ENST00000345662 RSRC2Q7L4I2 434 aaKnown RBP18.6■□□□□ 0.57
SPAST-202ENST00000345662 MOV10L1Q9BXT6 1211 aaKnown RBP18.6■□□□□ 0.57
SPAST-202ENST00000345662 GUCY1A2P33402 732 aa18.6■□□□□ 0.57
SPAST-202ENST00000345662 GCLMP48507 274 aa18.6■□□□□ 0.57
SPAST-202ENST00000345662 DNAL1Q4LDG9 190 aa18.6■□□□□ 0.57
SPAST-202ENST00000345662 OR6B2Q6IFH4 312 aa18.6■□□□□ 0.57
SPAST-202ENST00000345662 USP38Q8NB14 1042 aa18.6■□□□□ 0.57
SPAST-202ENST00000345662 SLC7A3Q8WY07 619 aa18.6■□□□□ 0.57
SPAST-202ENST00000345662 CEP170P1Q96L14 293 aa18.6■□□□□ 0.57
SPAST-202ENST00000345662 ROPN1BQ9BZX4 212 aaPredicted RBP18.6■□□□□ 0.57
SPAST-202ENST00000345662 INTS2Q9H0H0 1204 aaKnown RBP18.6■□□□□ 0.57
SPAST-202ENST00000345662 ROPN1Q9HAT0 212 aaPredicted RBP18.6■□□□□ 0.57
SPAST-202ENST00000345662 IL6STP40189 918 aaPredicted RBP18.59■□□□□ 0.57
SPAST-202ENST00000345662 SYDE1Q6ZW31 735 aaPredicted RBP18.59■□□□□ 0.57
SPAST-202ENST00000345662 FAM149B1Q96BN6 582 aa18.59■□□□□ 0.57
SPAST-202ENST00000345662 TRIM9Q9C026 710 aa18.59■□□□□ 0.57
SPAST-202ENST00000345662 KANSL2Q9H9L4 492 aa18.59■□□□□ 0.57
SPAST-202ENST00000345662 SLC38A10Q9HBR0 1119 aa18.59■□□□□ 0.57
SPAST-202ENST00000345662 SERPINB13Q9UIV8 391 aa18.59■□□□□ 0.57
SPAST-202ENST00000345662 PALLDQ8WX93 1383 aa18.59■□□□□ 0.57
SPAST-202ENST00000345662 A0A1W2PQJ5 194 aa18.59■□□□□ 0.57
SPAST-202ENST00000345662 CTCFP49711 727 aaPredicted RBP18.59■□□□□ 0.57
SPAST-202ENST00000345662 TFDP2Q14188 446 aa18.59■□□□□ 0.57
SPAST-202ENST00000345662 TRIM67Q6ZTA4 783 aa18.59■□□□□ 0.57
SPAST-202ENST00000345662 NACA2Q9H009 215 aa18.59■□□□□ 0.57
SPAST-202ENST00000345662 SNX5Q9Y5X3 404 aa18.59■□□□□ 0.57
SPAST-202ENST00000345662 GOLGA8CPA6NN73 597 aa18.59■□□□□ 0.57
SPAST-202ENST00000345662 MECOMQ03112 1051 aa18.59■□□□□ 0.57
SPAST-202ENST00000345662 DLGAP5Q15398 846 aa18.59■□□□□ 0.57
SPAST-202ENST00000345662 BZW1Q7L1Q6 419 aaKnown RBP18.59■□□□□ 0.57
SPAST-202ENST00000345662 GIPC2Q8TF65 315 aa18.59■□□□□ 0.57
SPAST-202ENST00000345662 MAGED2Q9UNF1 606 aaPredicted RBP18.59■□□□□ 0.57
SPAST-202ENST00000345662 CPDO75976 1380 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms