RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 ITGB8P26012 769 aa13.13□□□□□ -0.31
SNCA-202ENST00000345009 NLRP11P59045 1033 aaKnown RBP13.13□□□□□ -0.31
SNCA-202ENST00000345009 PLCB2Q00722 1185 aa13.13□□□□□ -0.31
SNCA-202ENST00000345009 AMPD3Q01432 767 aa13.13□□□□□ -0.31
SNCA-202ENST00000345009 TMEM62Q0P6H9 643 aa13.13□□□□□ -0.31
SNCA-202ENST00000345009 PPP2R5AQ15172 486 aa13.13□□□□□ -0.31
SNCA-202ENST00000345009 FAM102BQ5T8I3 360 aa13.13□□□□□ -0.31
SNCA-202ENST00000345009 PRPF38BQ5VTL8 546 aaKnown RBP13.13□□□□□ -0.31
SNCA-202ENST00000345009 USP49Q70CQ1 688 aa13.13□□□□□ -0.31
SNCA-202ENST00000345009 SV2BQ7L1I2 683 aa13.13□□□□□ -0.31
SNCA-202ENST00000345009 DEFB128Q7Z7B8 93 aa13.13□□□□□ -0.31
SNCA-202ENST00000345009 ZNF410Q86VK4 478 aa13.13□□□□□ -0.31
SNCA-202ENST00000345009 RHPN2Q8IUC4 686 aa13.13□□□□□ -0.31
SNCA-202ENST00000345009 LINC01465Q8N7H1 131 aa13.13□□□□□ -0.31
SNCA-202ENST00000345009 PRPF31Q8WWY3 499 aaKnown RBP13.13□□□□□ -0.31
SNCA-202ENST00000345009 SEPT8Q92599 483 aa13.13□□□□□ -0.31
SNCA-202ENST00000345009 LARP4BQ92615 738 aaKnown RBP13.13□□□□□ -0.31
SNCA-202ENST00000345009 RAD54LQ92698 747 aa13.13□□□□□ -0.31
SNCA-202ENST00000345009 APBB2Q92870 758 aa13.13□□□□□ -0.31
SNCA-202ENST00000345009 TMEM143Q96AN5 459 aa13.13□□□□□ -0.31
SNCA-202ENST00000345009 IFT74Q96LB3 600 aa13.13□□□□□ -0.31
SNCA-202ENST00000345009 DRC1Q96MC2 740 aa13.13□□□□□ -0.31
SNCA-202ENST00000345009 PANK2Q9BZ23 570 aa13.13□□□□□ -0.31
SNCA-202ENST00000345009 LHX6Q9UPM6 363 aa13.13□□□□□ -0.31
SNCA-202ENST00000345009 COL4A3BPQ9Y5P4 624 aa13.13□□□□□ -0.31
SNCA-202ENST00000345009 ALPK3Q96L96 1907 aa13.13□□□□□ -0.31
SNCA-202ENST00000345009 A0A1W2PQ27 194 aa13.12□□□□□ -0.31
SNCA-202ENST00000345009 A0A1W2PQ64 194 aa13.12□□□□□ -0.31
SNCA-202ENST00000345009 A0A1W2PQD8 194 aa13.12□□□□□ -0.31
SNCA-202ENST00000345009 GPR182O15218 404 aa13.12□□□□□ -0.31
SNCA-202ENST00000345009 EIF4BP23588 611 aaKnown RBP13.12□□□□□ -0.31
SNCA-202ENST00000345009 BMP8BP34820 402 aa13.12□□□□□ -0.31
SNCA-202ENST00000345009 NCBP1Q09161 790 aaKnown RBP13.12□□□□□ -0.31
SNCA-202ENST00000345009 LAMTOR4Q0VGL1 99 aa13.12□□□□□ -0.31
SNCA-202ENST00000345009 IKBKEQ14164 716 aa13.12□□□□□ -0.31
SNCA-202ENST00000345009 KIZQ2M2Z5 673 aa13.12□□□□□ -0.31
SNCA-202ENST00000345009 RESP18Q5W5W9 173 aa13.12□□□□□ -0.31
SNCA-202ENST00000345009 RINT1Q6NUQ1 792 aa13.12□□□□□ -0.31
SNCA-202ENST00000345009 SHC4Q6S5L8 630 aa13.12□□□□□ -0.31
SNCA-202ENST00000345009 TSHZ1Q6ZSZ6 1077 aa13.12□□□□□ -0.31
SNCA-202ENST00000345009 PDILTQ8N807 584 aa13.12□□□□□ -0.31
SNCA-202ENST00000345009 GDF15Q99988 308 aa13.12□□□□□ -0.31
SNCA-202ENST00000345009 C17orf75Q9HAS0 396 aa13.12□□□□□ -0.31
SNCA-202ENST00000345009 MAGEF1Q9HAY2 307 aa13.12□□□□□ -0.31
SNCA-202ENST00000345009 KCNH3Q9ULD8 1083 aa13.12□□□□□ -0.31
SNCA-202ENST00000345009 RPS6KA5O75582 802 aa13.11□□□□□ -0.31
SNCA-202ENST00000345009 CXCL10P02778 98 aa13.11□□□□□ -0.31
SNCA-202ENST00000345009 SRGAP2CP0DJJ0 459 aa13.11□□□□□ -0.31
SNCA-202ENST00000345009 GUCY2CP25092 1073 aa13.11□□□□□ -0.31
SNCA-202ENST00000345009 ARL2P36404 184 aa13.11□□□□□ -0.31
SNCA-202ENST00000345009 PHKA2P46019 1235 aa13.11□□□□□ -0.31
SNCA-202ENST00000345009 GPC3P51654 580 aa13.11□□□□□ -0.31
SNCA-202ENST00000345009 SMTNP53814 917 aa13.11□□□□□ -0.31
SNCA-202ENST00000345009 SLC12A3P55017 1021 aa13.11□□□□□ -0.31
SNCA-202ENST00000345009 POU5F1BQ06416 359 aa13.11□□□□□ -0.31
SNCA-202ENST00000345009 MGAT3Q09327 533 aa13.11□□□□□ -0.31
SNCA-202ENST00000345009 PAK2Q13177 524 aa13.11□□□□□ -0.31
SNCA-202ENST00000345009 DHX8Q14562 1220 aaKnown RBP13.11□□□□□ -0.31
SNCA-202ENST00000345009 PCBP1Q15365 356 aaKnown RBP eCLIP13.11□□□□□ -0.31
SNCA-202ENST00000345009 FBXO47Q5MNV8 452 aa13.11□□□□□ -0.31
SNCA-202ENST00000345009 C1orf186Q6ZWK4 172 aa13.11□□□□□ -0.31
SNCA-202ENST00000345009 MAEAQ7L5Y9 396 aa13.11□□□□□ -0.31
SNCA-202ENST00000345009 SRGAP1Q7Z6B7 1085 aa13.11□□□□□ -0.31
SNCA-202ENST00000345009 GPBP1Q86WP2 473 aa13.11□□□□□ -0.31
SNCA-202ENST00000345009 CEP57L1Q8IYX8 460 aa13.11□□□□□ -0.31
SNCA-202ENST00000345009 NLRP4Q96MN2 994 aa13.11□□□□□ -0.31
SNCA-202ENST00000345009 FTHL17Q9BXU8 183 aa13.11□□□□□ -0.31
SNCA-202ENST00000345009 IFIH1Q9BYX4 1025 aaKnown RBP13.11□□□□□ -0.31
SNCA-202ENST00000345009 POLR3FQ9H1D9 316 aaPredicted RBP13.11□□□□□ -0.31
SNCA-202ENST00000345009 ADAMTS10Q9H324 1103 aa13.11□□□□□ -0.31
SNCA-202ENST00000345009 USP25Q9UHP3 1055 aa13.11□□□□□ -0.31
SNCA-202ENST00000345009 MYH15Q9Y2K3 1946 aa13.11□□□□□ -0.31
SNCA-202ENST00000345009 ABHD14A-ACY1A0A1B0GW23 586 aa13.1□□□□□ -0.31
SNCA-202ENST00000345009 POLR2DO15514 142 aaKnown RBP13.1□□□□□ -0.31
SNCA-202ENST00000345009 NBNO60934 754 aa13.1□□□□□ -0.31
SNCA-202ENST00000345009 GPR32O75388 356 aa13.1□□□□□ -0.31
SNCA-202ENST00000345009 BAIAP3O94812 1187 aa13.1□□□□□ -0.31
SNCA-202ENST00000345009 ACRP10323 421 aa13.1□□□□□ -0.31
SNCA-202ENST00000345009 GHRP10912 638 aa13.1□□□□□ -0.31
SNCA-202ENST00000345009 SFPQP23246 707 aaKnown RBP eCLIP13.1□□□□□ -0.31
SNCA-202ENST00000345009 DMP1Q13316 513 aaPredicted RBP13.1□□□□□ -0.31
SNCA-202ENST00000345009 DRP2Q13474 957 aa13.1□□□□□ -0.31
SNCA-202ENST00000345009 MCM6Q14566 821 aa13.1□□□□□ -0.31
SNCA-202ENST00000345009 CNKSR3Q6P9H4 555 aa13.1□□□□□ -0.31
SNCA-202ENST00000345009 TRAF7Q6Q0C0 670 aa13.1□□□□□ -0.31
SNCA-202ENST00000345009 ZNF365Q70YC5 407 aa13.1□□□□□ -0.31
SNCA-202ENST00000345009 KCNK18Q7Z418 384 aa13.1□□□□□ -0.31
SNCA-202ENST00000345009 ZBTB8OSQ8IWT0 167 aa13.1□□□□□ -0.31
SNCA-202ENST00000345009 RNF149Q8NC42 400 aa13.1□□□□□ -0.31
SNCA-202ENST00000345009 MRPS27Q92552 414 aaKnown RBP13.1□□□□□ -0.31
SNCA-202ENST00000345009 DHX58Q96C10 678 aa13.1□□□□□ -0.31
SNCA-202ENST00000345009 GBP4Q96PP9 640 aa13.1□□□□□ -0.31
SNCA-202ENST00000345009 OSMRQ99650 979 aa13.1□□□□□ -0.31
SNCA-202ENST00000345009 C2orf40Q9H1Z8 148 aa13.1□□□□□ -0.31
SNCA-202ENST00000345009 GDPD2Q9HCC8 539 aa13.1□□□□□ -0.31
SNCA-202ENST00000345009 XPNPEP1Q9NQW7 623 aa13.1□□□□□ -0.31
SNCA-202ENST00000345009 LARSQ9P2J5 1176 aaKnown RBP13.1□□□□□ -0.31
SNCA-202ENST00000345009 ODF2LQ9ULJ1 636 aa13.1□□□□□ -0.31
SNCA-202ENST00000345009 PHLPP2Q6ZVD8 1323 aa13.1□□□□□ -0.31
SNCA-202ENST00000345009 A0A087WZ62 844 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms