RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 TTC26A0AVF1 554 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 ASB14A6NK59 587 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 SLC16A3O15427 465 aaKnown RBP14.01□□□□□ -0.17
CLK3-201ENST00000345005 TGFB1I1O43294 461 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 PPP1R37O75864 691 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 CAPN2P17655 700 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 TRIM21P19474 475 aaKnown RBP14.01□□□□□ -0.17
CLK3-201ENST00000345005 UBA1P22314 1058 aaKnown RBP14.01□□□□□ -0.17
CLK3-201ENST00000345005 XKR3Q5GH77 459 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 PLA2G4FQ68DD2 849 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 ZNF662Q6ZS27 426 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 CCDC60Q8IWA6 550 aaPredicted RBP14.01□□□□□ -0.17
CLK3-201ENST00000345005 NEK11Q8NG66 645 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 MORC4Q8TE76 937 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 CEP170P1Q96L14 293 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 ANKZF1Q9H8Y5 726 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 C17orf75Q9HAS0 396 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 LZTFL1Q9NQ48 299 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 ABHD10Q9NUJ1 306 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 MORF4L1Q9UBU8 362 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 ARMCX3Q9UH62 379 aaPredicted RBP14.01□□□□□ -0.17
CLK3-201ENST00000345005 FEZ2Q9UHY8 353 aaPredicted RBP14.01□□□□□ -0.17
CLK3-201ENST00000345005 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.01□□□□□ -0.17
CLK3-201ENST00000345005 SYNGAP1Q96PV0 1343 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 IGSF9BQ9UPX0 1349 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 A0A1W2PQJ5 194 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 TMEM150BA6NC51 233 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 SOWAHDA6NJG2 315 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 K7ENM7 598 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 NKRFO15226 690 aaKnown RBP eCLIP14.01□□□□□ -0.17
CLK3-201ENST00000345005 LMAN1P49257 510 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 PRKCEQ02156 737 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 KCNA1Q09470 495 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 MKRN3Q13064 507 aaKnown RBP14.01□□□□□ -0.17
CLK3-201ENST00000345005 RAD9BQ6WBX8 426 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 TRMT1LQ7Z2T5 733 aaKnown RBP14.01□□□□□ -0.17
CLK3-201ENST00000345005 MCPH1Q8NEM0 835 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 KIFAP3Q92845 792 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 FGD4Q96M96 766 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 DESI2Q9BSY9 194 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 PORCNQ9H237 461 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 ST6GALNAC4Q9H4F1 302 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 TMEM206Q9H813 350 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 ZNF302Q9NR11 478 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 MAFBQ9Y5Q3 323 aaPredicted RBP14.01□□□□□ -0.17
CLK3-201ENST00000345005 ZMYM2Q9UBW7 1377 aa14.01□□□□□ -0.17
CLK3-201ENST00000345005 IGKV6D-21A0A0A0MT36 114 aa14□□□□□ -0.17
CLK3-201ENST00000345005 RNF225M0QZC1 329 aaPredicted RBP14□□□□□ -0.17
CLK3-201ENST00000345005 STRNO43815 780 aa14□□□□□ -0.17
CLK3-201ENST00000345005 SORBS3O60504 671 aa14□□□□□ -0.17
CLK3-201ENST00000345005 DGAT1O75907 488 aa14□□□□□ -0.17
CLK3-201ENST00000345005 FARP2O94887 1054 aaPredicted RBP14□□□□□ -0.17
CLK3-201ENST00000345005 EPB41P11171 864 aaKnown RBP14□□□□□ -0.17
CLK3-201ENST00000345005 SMTNP53814 917 aa14□□□□□ -0.17
CLK3-201ENST00000345005 ZBED6P86452 979 aa14□□□□□ -0.17
CLK3-201ENST00000345005 MYBPC2Q14324 1141 aa14□□□□□ -0.17
CLK3-201ENST00000345005 FAM102BQ5T8I3 360 aa14□□□□□ -0.17
CLK3-201ENST00000345005 IQCEQ6IPM2 695 aa14□□□□□ -0.17
CLK3-201ENST00000345005 METTL7BQ6UX53 244 aa14□□□□□ -0.17
CLK3-201ENST00000345005 SYCP3Q8IZU3 236 aa14□□□□□ -0.17
CLK3-201ENST00000345005 ANKRD13CQ8N6S4 541 aa14□□□□□ -0.17
CLK3-201ENST00000345005 ACCSQ96QU6 501 aa14□□□□□ -0.17
CLK3-201ENST00000345005 DNAJC7Q99615 494 aa14□□□□□ -0.17
CLK3-201ENST00000345005 SH2D3AQ9BRG2 576 aa14□□□□□ -0.17
CLK3-201ENST00000345005 EDEM3Q9BZQ6 932 aa14□□□□□ -0.17
CLK3-201ENST00000345005 TTYH3Q9C0H2 523 aa14□□□□□ -0.17
CLK3-201ENST00000345005 FAM107BQ9H098 131 aa14□□□□□ -0.17
CLK3-201ENST00000345005 HAUS4Q9H6D7 363 aa14□□□□□ -0.17
CLK3-201ENST00000345005 CYP26B1Q9NR63 512 aa14□□□□□ -0.17
CLK3-201ENST00000345005 SEPT9Q9UHD8 586 aaPredicted RBP14□□□□□ -0.17
CLK3-201ENST00000345005 SIK3Q9Y2K2 1263 aa14□□□□□ -0.17
CLK3-201ENST00000345005 TARSL2A2RTX5 802 aaKnown RBP13.99□□□□□ -0.17
CLK3-201ENST00000345005 CLIC2O15247 247 aa13.99□□□□□ -0.17
CLK3-201ENST00000345005 TOMM70O94826 608 aa13.99□□□□□ -0.17
CLK3-201ENST00000345005 SNRPFP62306 86 aaKnown RBP13.99□□□□□ -0.17
CLK3-201ENST00000345005 GTF2BQ00403 316 aa13.99□□□□□ -0.17
CLK3-201ENST00000345005 CKAP4Q07065 602 aaKnown RBP13.99□□□□□ -0.17
CLK3-201ENST00000345005 FAM160B1Q5W0V3 765 aa13.99□□□□□ -0.17
CLK3-201ENST00000345005 CST9Q5W186 159 aa13.99□□□□□ -0.17
CLK3-201ENST00000345005 HAUS6Q7Z4H7 955 aa13.99□□□□□ -0.17
CLK3-201ENST00000345005 ABRAQ8N0Z2 381 aa13.99□□□□□ -0.17
CLK3-201ENST00000345005 RUBCNQ92622 972 aa13.99□□□□□ -0.17
CLK3-201ENST00000345005 PARK7Q99497 189 aaKnown RBP13.99□□□□□ -0.17
CLK3-201ENST00000345005 MKNK1Q9BUB5 465 aa13.99□□□□□ -0.17
CLK3-201ENST00000345005 MLXIPQ9HAP2 919 aa13.99□□□□□ -0.17
CLK3-201ENST00000345005 ZCCHC17Q9NP64 241 aaKnown RBP13.99□□□□□ -0.17
CLK3-201ENST00000345005 ZNHIT6Q9NWK9 470 aaKnown RBP13.99□□□□□ -0.17
CLK3-201ENST00000345005 KCNG1Q9UIX4 513 aa13.99□□□□□ -0.17
CLK3-201ENST00000345005 MYO6Q9UM54 1294 aa13.99□□□□□ -0.17
CLK3-201ENST00000345005 TELO2Q9Y4R8 837 aa13.99□□□□□ -0.17
CLK3-201ENST00000345005 GSTTP1A0A1W2PQM5 241 aa13.99□□□□□ -0.17
CLK3-201ENST00000345005 RASSF10A6NK89 507 aa13.99□□□□□ -0.17
CLK3-201ENST00000345005 VGLL3A8MV65 326 aa13.99□□□□□ -0.17
CLK3-201ENST00000345005 GGPS1O95749 300 aa13.99□□□□□ -0.17
CLK3-201ENST00000345005 ITGBL1O95965 494 aaPredicted RBP13.99□□□□□ -0.17
CLK3-201ENST00000345005 PSMC2P35998 433 aaKnown RBP13.99□□□□□ -0.17
CLK3-201ENST00000345005 NCKAP1LP55160 1127 aa13.99□□□□□ -0.17
CLK3-201ENST00000345005 PEX3P56589 373 aa13.99□□□□□ -0.17
CLK3-201ENST00000345005 RTP1P59025 263 aa13.99□□□□□ -0.17
CLK3-201ENST00000345005 KRT83P78385 493 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms