RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 ADGRA3Q8IWK6 1321 aa17.98■□□□□ 0.47
CEACAM1-202ENST00000344391 PGK1P00558 417 aa17.98■□□□□ 0.47
CEACAM1-202ENST00000344391 INHAP05111 366 aa17.98■□□□□ 0.47
CEACAM1-202ENST00000344391 KLRC1P26715 233 aa17.98■□□□□ 0.47
CEACAM1-202ENST00000344391 GRK4P32298 578 aa17.98■□□□□ 0.47
CEACAM1-202ENST00000344391 NAMPTP43490 491 aa17.98■□□□□ 0.47
CEACAM1-202ENST00000344391 PSEN2P49810 448 aa17.98■□□□□ 0.47
CEACAM1-202ENST00000344391 PURAQ00577 322 aaKnown RBP17.98■□□□□ 0.47
CEACAM1-202ENST00000344391 FKBP3Q00688 224 aaKnown RBP17.98■□□□□ 0.47
CEACAM1-202ENST00000344391 MFSD10Q14728 455 aa17.98■□□□□ 0.47
CEACAM1-202ENST00000344391 GRIK4Q16099 956 aa17.98■□□□□ 0.47
CEACAM1-202ENST00000344391 KIAA0753Q2KHM9 967 aa17.98■□□□□ 0.47
CEACAM1-202ENST00000344391 GNASQ5JWF2 1037 aa17.98■□□□□ 0.47
CEACAM1-202ENST00000344391 EFCAB12Q6NXP0 572 aa17.98■□□□□ 0.47
CEACAM1-202ENST00000344391 LRRC55Q6ZSA7 311 aa17.98■□□□□ 0.47
CEACAM1-202ENST00000344391 APTXQ7Z2E3 356 aaKnown RBP17.98■□□□□ 0.47
CEACAM1-202ENST00000344391 ZC3H3Q8IXZ2 948 aaKnown RBP17.98■□□□□ 0.47
CEACAM1-202ENST00000344391 LRRC71Q8N4P6 559 aa17.98■□□□□ 0.47
CEACAM1-202ENST00000344391 PRPF31Q8WWY3 499 aaKnown RBP17.98■□□□□ 0.47
CEACAM1-202ENST00000344391 KCNN1Q92952 543 aa17.98■□□□□ 0.47
CEACAM1-202ENST00000344391 HVCN1Q96D96 273 aa17.98■□□□□ 0.47
CEACAM1-202ENST00000344391 ACCSQ96QU6 501 aa17.98■□□□□ 0.47
CEACAM1-202ENST00000344391 PPP1R9BQ96SB3 815 aa17.98■□□□□ 0.47
CEACAM1-202ENST00000344391 KIFC3Q9BVG8 833 aa17.98■□□□□ 0.47
CEACAM1-202ENST00000344391 TMEM206Q9H813 350 aa17.98■□□□□ 0.47
CEACAM1-202ENST00000344391 XPNPEP3Q9NQH7 507 aa17.98■□□□□ 0.47
CEACAM1-202ENST00000344391 IFNKQ9P0W0 207 aa17.98■□□□□ 0.47
CEACAM1-202ENST00000344391 ARHGAP28Q9P2N2 729 aa17.98■□□□□ 0.47
CEACAM1-202ENST00000344391 LIMA1Q9UHB6 759 aaKnown RBP17.98■□□□□ 0.47
CEACAM1-202ENST00000344391 PTCH2Q9Y6C5 1203 aa17.98■□□□□ 0.47
CEACAM1-202ENST00000344391 SIP14410 1827 aa17.97■□□□□ 0.47
CEACAM1-202ENST00000344391 KCNJ18B7U540 433 aa17.97■□□□□ 0.47
CEACAM1-202ENST00000344391 CALUO43852 315 aaPredicted RBP17.97■□□□□ 0.47
CEACAM1-202ENST00000344391 FGFR1OPO95684 399 aaKnown RBP17.97■□□□□ 0.47
CEACAM1-202ENST00000344391 SERPINC1P01008 464 aa17.97■□□□□ 0.47
CEACAM1-202ENST00000344391 CCDC173Q0VFZ6 552 aa17.97■□□□□ 0.47
CEACAM1-202ENST00000344391 KCNJ12Q14500 433 aa17.97■□□□□ 0.47
CEACAM1-202ENST00000344391 TCP11X2Q5H9J9 407 aa17.97■□□□□ 0.47
CEACAM1-202ENST00000344391 MARCH8Q5T0T0 291 aa17.97■□□□□ 0.47
CEACAM1-202ENST00000344391 MTHFD1LQ6UB35 978 aa17.97■□□□□ 0.47
CEACAM1-202ENST00000344391 LINC01465Q8N7H1 131 aa17.97■□□□□ 0.47
CEACAM1-202ENST00000344391 RETREG2Q8NC44 543 aa17.97■□□□□ 0.47
CEACAM1-202ENST00000344391 PSPC1Q8WXF1 523 aaKnown RBP17.97■□□□□ 0.47
CEACAM1-202ENST00000344391 ZBTB10Q96DT7 871 aa17.97■□□□□ 0.47
CEACAM1-202ENST00000344391 EEF2KMTQ96G04 330 aa17.97■□□□□ 0.47
CEACAM1-202ENST00000344391 MRFAP1L1Q96HT8 127 aa17.97■□□□□ 0.47
CEACAM1-202ENST00000344391 KATNAL1Q9BW62 490 aa17.97■□□□□ 0.47
CEACAM1-202ENST00000344391 XPO4Q9C0E2 1151 aaKnown RBP17.97■□□□□ 0.47
CEACAM1-202ENST00000344391 IKZF4Q9H2S9 585 aa17.97■□□□□ 0.47
CEACAM1-202ENST00000344391 SCN10AQ9Y5Y9 1956 aa17.96■□□□□ 0.47
CEACAM1-202ENST00000344391 DENND3A2RUS2 1198 aa17.96■□□□□ 0.47
CEACAM1-202ENST00000344391 RRN3P2A6NIE6 340 aa17.96■□□□□ 0.47
CEACAM1-202ENST00000344391 LRRC10BA6NIK2 292 aa17.96■□□□□ 0.47
CEACAM1-202ENST00000344391 H0YCG3 227 aa17.96■□□□□ 0.47
CEACAM1-202ENST00000344391 SCP2P22307 547 aa17.96■□□□□ 0.47
CEACAM1-202ENST00000344391 EEF1GP26641 437 aaKnown RBP17.96■□□□□ 0.47
CEACAM1-202ENST00000344391 UBASH3AP57075 661 aa17.96■□□□□ 0.47
CEACAM1-202ENST00000344391 CAPSQ13938 189 aa17.96■□□□□ 0.47
CEACAM1-202ENST00000344391 MXD4Q14582 209 aaPredicted RBP17.96■□□□□ 0.47
CEACAM1-202ENST00000344391 FAM114A1Q8IWE2 563 aa17.96■□□□□ 0.47
CEACAM1-202ENST00000344391 KLHDC9Q8NEP7 349 aa17.96■□□□□ 0.47
CEACAM1-202ENST00000344391 CEP63Q96MT8 703 aa17.96■□□□□ 0.47
CEACAM1-202ENST00000344391 NAP1L5Q96NT1 182 aaPredicted RBP17.96■□□□□ 0.47
CEACAM1-202ENST00000344391 GBP3Q9H0R5 595 aa17.96■□□□□ 0.47
CEACAM1-202ENST00000344391 SUCLA2Q9P2R7 463 aaPredicted RBP17.96■□□□□ 0.47
CEACAM1-202ENST00000344391 DDX20Q9UHI6 824 aaKnown RBP17.96■□□□□ 0.47
CEACAM1-202ENST00000344391 TBX20Q9UMR3 447 aa17.96■□□□□ 0.47
CEACAM1-202ENST00000344391 NRCAMQ92823 1304 aa17.95■□□□□ 0.46
CEACAM1-202ENST00000344391 ZEB2O60315 1214 aa17.95■□□□□ 0.46
CEACAM1-202ENST00000344391 SMIM10L2AP0DMW4 78 aa17.95■□□□□ 0.46
CEACAM1-202ENST00000344391 SMIM10L2BP0DMW5 78 aa17.95■□□□□ 0.46
CEACAM1-202ENST00000344391 ABCD1P33897 745 aa17.95■□□□□ 0.46
CEACAM1-202ENST00000344391 DNM2P50570 870 aa17.95■□□□□ 0.46
CEACAM1-202ENST00000344391 LAMTOR4Q0VGL1 99 aa17.95■□□□□ 0.46
CEACAM1-202ENST00000344391 ADAM9Q13443 819 aa17.95■□□□□ 0.46
CEACAM1-202ENST00000344391 KRT31Q15323 416 aa17.95■□□□□ 0.46
CEACAM1-202ENST00000344391 NFIL3Q16649 462 aa17.95■□□□□ 0.46
CEACAM1-202ENST00000344391 MAP4K3Q8IVH8 894 aa17.95■□□□□ 0.46
CEACAM1-202ENST00000344391 SYCP3Q8IZU3 236 aa17.95■□□□□ 0.46
CEACAM1-202ENST00000344391 METTL13Q8N6R0 699 aa17.95■□□□□ 0.46
CEACAM1-202ENST00000344391 SETD4Q9NVD3 440 aa17.95■□□□□ 0.46
CEACAM1-202ENST00000344391 TRIP12Q14669 1992 aaPredicted RBP17.95■□□□□ 0.46
CEACAM1-202ENST00000344391 LRRIQ4A6NIV6 560 aa17.94■□□□□ 0.46
CEACAM1-202ENST00000344391 ASAP2O43150 1006 aa17.94■□□□□ 0.46
CEACAM1-202ENST00000344391 CBFA2T2O43439 604 aa17.94■□□□□ 0.46
CEACAM1-202ENST00000344391 NR2F2P24468 414 aa17.94■□□□□ 0.46
CEACAM1-202ENST00000344391 CST5P28325 142 aaPredicted RBP17.94■□□□□ 0.46
CEACAM1-202ENST00000344391 CLCN3P51790 818 aa17.94■□□□□ 0.46
CEACAM1-202ENST00000344391 HS2ST1Q7LGA3 356 aa17.94■□□□□ 0.46
CEACAM1-202ENST00000344391 TAS1R3Q7RTX0 852 aa17.94■□□□□ 0.46
CEACAM1-202ENST00000344391 FILIP1Q7Z7B0 1213 aa17.94■□□□□ 0.46
CEACAM1-202ENST00000344391 ANKRD20A12PQ8NF67 263 aa17.94■□□□□ 0.46
CEACAM1-202ENST00000344391 DEPTORQ8TB45 409 aa17.94■□□□□ 0.46
CEACAM1-202ENST00000344391 GOLGA5Q8TBA6 731 aa17.94■□□□□ 0.46
CEACAM1-202ENST00000344391 LMBR1Q8WVP7 490 aa17.94■□□□□ 0.46
CEACAM1-202ENST00000344391 CNOT6LQ96LI5 555 aaKnown RBP17.94■□□□□ 0.46
CEACAM1-202ENST00000344391 CTAGE1Q96RT6 745 aa17.94■□□□□ 0.46
CEACAM1-202ENST00000344391 MTG1Q9BT17 334 aaPredicted RBP17.94■□□□□ 0.46
CEACAM1-202ENST00000344391 AGPAT3Q9NRZ7 376 aa17.94■□□□□ 0.46
CEACAM1-202ENST00000344391 MAGEC2Q9UBF1 373 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms