RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 ANP32DO95626 131 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 FAM107AO95990 144 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 BCL10O95999 233 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 ZSCAN20P17040 1043 aaPredicted RBP6.55□□□□□ -1.36
VCAN-203ENST00000343200 KLHL38Q2WGJ6 581 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 WLSQ5T9L3 541 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 PCNX4Q63HM2 1172 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 POLNQ7Z5Q5 900 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 LENG1Q96BZ8 264 aaPredicted RBP6.55□□□□□ -1.36
VCAN-203ENST00000343200 CABP5Q9NP86 173 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 IQGAP2Q13576 1575 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 DDX5P17844 614 aaKnown RBP6.55□□□□□ -1.36
VCAN-203ENST00000343200 PPARGP37231 505 aaPredicted RBP6.55□□□□□ -1.36
VCAN-203ENST00000343200 DMP1Q13316 513 aaPredicted RBP6.55□□□□□ -1.36
VCAN-203ENST00000343200 PUM3Q15397 648 aaKnown RBP6.55□□□□□ -1.36
VCAN-203ENST00000343200 CCDC36Q8IYA8 594 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 SUN5Q8TC36 379 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 FAM45AQ8TCE6 357 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 CCDC8Q9H0W5 538 aaPredicted RBP6.55□□□□□ -1.36
VCAN-203ENST00000343200 CYP4F11Q9HBI6 524 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 MRPL39Q9NYK5 338 aaKnown RBP6.55□□□□□ -1.36
VCAN-203ENST00000343200 ARMCX3Q9UH62 379 aaPredicted RBP6.55□□□□□ -1.36
VCAN-203ENST00000343200 CFAP69A5D8W1 941 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 IKBKBO14920 756 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 ABCB1P08183 1280 aaPredicted RBP6.54□□□□□ -1.36
VCAN-203ENST00000343200 SRGAP2CP0DJJ0 459 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 POLR2BP30876 1174 aaKnown RBP6.54□□□□□ -1.36
VCAN-203ENST00000343200 LGALS3BPQ08380 585 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 USH1GQ495M9 461 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 SCN3BQ9NY72 215 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 PYCARDQ9ULZ3 195 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 SMIM31A0A1B0GVY4 71 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 CENPXA8MT69 81 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 AP3B1O00203 1094 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 UBTFL6P0CB48 400 aaPredicted RBP6.54□□□□□ -1.36
VCAN-203ENST00000343200 EXOSC10Q01780 885 aaKnown RBP6.54□□□□□ -1.36
VCAN-203ENST00000343200 CLEC4FQ8N1N0 589 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 WWP1Q9H0M0 922 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 PPCSQ9HAB8 311 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 PLCL2Q9UPR0 1127 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 FAM92AA1XBS5 289 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 CCDC162PA2VCL2 907 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 EVPLLA8MZ36 301 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 TNFAIP8O95379 198 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 MAGEA2P43356 314 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 PDZK1Q5T2W1 519 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 WAPLQ7Z5K2 1190 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 COG1Q8WTW3 980 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 GPBP1L1Q9HC44 474 aaPredicted RBP6.54□□□□□ -1.36
VCAN-203ENST00000343200 CHMP1AQ9HD42 196 aaPredicted RBP6.54□□□□□ -1.36
VCAN-203ENST00000343200 AKAP10O43572 662 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 BPIFB4P59827 614 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 SCRN1Q12765 414 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 COX10Q12887 443 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 CYB5D1Q6P9G0 228 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 CDC5LQ99459 802 aaKnown RBP6.54□□□□□ -1.36
VCAN-203ENST00000343200 TAF1DQ9H5J8 278 aaPredicted RBP6.54□□□□□ -1.36
VCAN-203ENST00000343200 SCN4AP35499 1836 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 KITP10721 976 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 ARHGEF25Q86VW2 580 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 ACAD9Q9H845 621 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 C8orf4Q9NR00 106 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 POLEQ07864 2286 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 CCDC195A0A1B0GUA6 201 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 SPDYE2BA6NHP3 402 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 A8MXQ7 604 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 TJP3O95049 919 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 SPDYE6P0CI01 402 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 CDH3P22223 829 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 ADCY1Q08828 1119 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 SUZ12Q15022 739 aaKnown RBP6.54□□□□□ -1.36
VCAN-203ENST00000343200 R3HDM1Q15032 1099 aaKnown RBP6.54□□□□□ -1.36
VCAN-203ENST00000343200 TRIM74Q86UV6 250 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 TRIM73Q86UV7 250 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 KCTD6Q8NC69 237 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 UBASH3BQ8TF42 649 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 ABCC12Q96J65 1359 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 PBRM1Q86U86 1689 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 MAP3K13O43283 966 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 EXOC3O60645 756 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 TOM1O60784 492 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 GYS2P54840 703 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 BNC1Q01954 994 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 ROR2Q01974 943 aaKnown RBP6.54□□□□□ -1.36
VCAN-203ENST00000343200 ITIH4Q14624 930 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 TTC38Q5R3I4 469 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 FAM47EQ6ZV65 393 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 PLEKHM2Q8IWE5 1019 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 MINDY2Q8NBR6 621 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 OTUD5Q96G74 571 aa6.54□□□□□ -1.36
VCAN-203ENST00000343200 HBS1LQ9Y450 684 aaKnown RBP6.54□□□□□ -1.36
VCAN-203ENST00000343200 PIPSLA2A3N6 862 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 SOWAHDA6NJG2 315 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 F8VZ95 297 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 IGF2BP3O00425 579 aaKnown RBP eCLIP6.53□□□□□ -1.36
VCAN-203ENST00000343200 AREL1O15033 823 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 MYL1P05976 194 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 ATF4P18848 351 aaPredicted RBP6.53□□□□□ -1.36
VCAN-203ENST00000343200 C21orf59P57076 290 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 LRRC36Q1X8D7 754 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms