RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 DDX41Q9UJV9 622 aaKnown RBP21.87■■□□□ 1.09
RTN1-202ENST00000342503 TBX20Q9UMR3 447 aa21.87■■□□□ 1.09
RTN1-202ENST00000342503 SLC45A1Q9Y2W3 748 aa21.87■■□□□ 1.09
RTN1-202ENST00000342503 EIF4A3P38919 411 aaKnown RBP21.86■■□□□ 1.09
RTN1-202ENST00000342503 SFMBT2Q5VUG0 894 aa21.86■■□□□ 1.09
RTN1-202ENST00000342503 RDH13Q8NBN7 331 aa21.86■■□□□ 1.09
RTN1-202ENST00000342503 BRI3BPQ8WY22 251 aa21.86■■□□□ 1.09
RTN1-202ENST00000342503 SYN2Q92777 582 aaPredicted RBP21.86■■□□□ 1.09
RTN1-202ENST00000342503 HVCN1Q96D96 273 aa21.86■■□□□ 1.09
RTN1-202ENST00000342503 CBWD1Q9BRT8 395 aa21.86■■□□□ 1.09
RTN1-202ENST00000342503 NTPCRQ9BSD7 190 aaKnown RBP21.86■■□□□ 1.09
RTN1-202ENST00000342503 GTPBP10A4D1E9 387 aaKnown RBP21.86■■□□□ 1.09
RTN1-202ENST00000342503 RTP1P59025 263 aa21.86■■□□□ 1.09
RTN1-202ENST00000342503 SNRPFP62306 86 aaKnown RBP21.86■■□□□ 1.09
RTN1-202ENST00000342503 PPP2R5AQ15172 486 aa21.86■■□□□ 1.09
RTN1-202ENST00000342503 KLHDC7AQ5VTJ3 777 aa21.86■■□□□ 1.09
RTN1-202ENST00000342503 METTL7BQ6UX53 244 aa21.86■■□□□ 1.09
RTN1-202ENST00000342503 MORC4Q8TE76 937 aa21.86■■□□□ 1.09
RTN1-202ENST00000342503 POLR3FQ9H1D9 316 aaPredicted RBP21.86■■□□□ 1.09
RTN1-202ENST00000342503 MLXIPQ9HAP2 919 aa21.86■■□□□ 1.09
RTN1-202ENST00000342503 EXOC7Q9UPT5 735 aa21.86■■□□□ 1.09
RTN1-202ENST00000342503 DENND3A2RUS2 1198 aa21.85■■□□□ 1.09
RTN1-202ENST00000342503 URI1O94763 535 aaPredicted RBP21.85■■□□□ 1.09
RTN1-202ENST00000342503 CELF2O95319 508 aaKnown RBP21.85■■□□□ 1.09
RTN1-202ENST00000342503 TRIM49P0CI25 452 aa21.85■■□□□ 1.09
RTN1-202ENST00000342503 TRIM49CP0CI26 452 aa21.85■■□□□ 1.09
RTN1-202ENST00000342503 EMC2Q15006 297 aa21.85■■□□□ 1.09
RTN1-202ENST00000342503 ZNF569Q5MCW4 686 aa21.85■■□□□ 1.09
RTN1-202ENST00000342503 HGSNATQ68CP4 663 aa21.85■■□□□ 1.09
RTN1-202ENST00000342503 KCNV1Q6PIU1 500 aa21.85■■□□□ 1.09
RTN1-202ENST00000342503 ANKRD23Q86SG2 305 aa21.85■■□□□ 1.09
RTN1-202ENST00000342503 KIAA1328Q86T90 577 aa21.85■■□□□ 1.09
RTN1-202ENST00000342503 FBXO16Q8IX29 292 aaPredicted RBP21.85■■□□□ 1.09
RTN1-202ENST00000342503 ANKRD13CQ8N6S4 541 aa21.85■■□□□ 1.09
RTN1-202ENST00000342503 C2orf69Q8N8R5 385 aa21.85■■□□□ 1.09
RTN1-202ENST00000342503 SEPT1Q8WYJ6 367 aa21.85■■□□□ 1.09
RTN1-202ENST00000342503 NIFKQ9BYG3 293 aaKnown RBP21.85■■□□□ 1.09
RTN1-202ENST00000342503 SIX2Q9NPC8 291 aa21.85■■□□□ 1.09
RTN1-202ENST00000342503 HSPBP1Q9NZL4 362 aa21.85■■□□□ 1.09
RTN1-202ENST00000342503 GCNT4Q9P109 453 aa21.85■■□□□ 1.09
RTN1-202ENST00000342503 TRIM10Q9UDY6 481 aa21.85■■□□□ 1.09
RTN1-202ENST00000342503 TLR2O60603 784 aa21.84■■□□□ 1.09
RTN1-202ENST00000342503 IPO7O95373 1038 aaKnown RBP21.84■■□□□ 1.09
RTN1-202ENST00000342503 TCF7P36402 384 aaPredicted RBP21.84■■□□□ 1.09
RTN1-202ENST00000342503 FMO5P49326 533 aa21.84■■□□□ 1.09
RTN1-202ENST00000342503 KIF11P52732 1056 aa21.84■■□□□ 1.09
RTN1-202ENST00000342503 POLGP54098 1239 aaPredicted RBP21.84■■□□□ 1.09
RTN1-202ENST00000342503 CCNA1P78396 465 aa21.84■■□□□ 1.09
RTN1-202ENST00000342503 BFSP1Q12934 665 aa21.84■■□□□ 1.09
RTN1-202ENST00000342503 FAM160B1Q5W0V3 765 aa21.84■■□□□ 1.09
RTN1-202ENST00000342503 MAP4K3Q8IVH8 894 aa21.84■■□□□ 1.09
RTN1-202ENST00000342503 HAUS4Q9H6D7 363 aa21.84■■□□□ 1.09
RTN1-202ENST00000342503 TFR2Q9UP52 801 aa21.84■■□□□ 1.09
RTN1-202ENST00000342503 ADGRA3Q8IWK6 1321 aa21.84■■□□□ 1.09
RTN1-202ENST00000342503 ANKRD63C9JTQ0 380 aa21.83■■□□□ 1.09
RTN1-202ENST00000342503 ZNF263O14978 683 aa21.83■■□□□ 1.09
RTN1-202ENST00000342503 SLU7O95391 586 aaKnown RBP21.83■■□□□ 1.09
RTN1-202ENST00000342503 UCHL3P15374 230 aa21.83■■□□□ 1.09
RTN1-202ENST00000342503 STAT5BP51692 787 aa21.83■■□□□ 1.09
RTN1-202ENST00000342503 CYP27A1Q02318 531 aa21.83■■□□□ 1.09
RTN1-202ENST00000342503 RAPGEF1Q13905 1077 aa21.83■■□□□ 1.09
RTN1-202ENST00000342503 ZNF662Q6ZS27 426 aa21.83■■□□□ 1.09
RTN1-202ENST00000342503 XXYLT1Q8NBI6 393 aa21.83■■□□□ 1.09
RTN1-202ENST00000342503 ZSWIM2Q8NEG5 633 aa21.83■■□□□ 1.09
RTN1-202ENST00000342503 AFAP1L1Q8TED9 768 aa21.83■■□□□ 1.09
RTN1-202ENST00000342503 JAKMIP2Q96AA8 810 aa21.83■■□□□ 1.09
RTN1-202ENST00000342503 IFT74Q96LB3 600 aa21.83■■□□□ 1.09
RTN1-202ENST00000342503 CEP89Q96ST8 783 aa21.83■■□□□ 1.09
RTN1-202ENST00000342503 DEF6Q9H4E7 631 aa21.83■■□□□ 1.09
RTN1-202ENST00000342503 FHOD1Q9Y613 1164 aa21.83■■□□□ 1.09
RTN1-202ENST00000342503 LOC102724159A0A0B4J2E5 919 aa21.83■■□□□ 1.08
RTN1-202ENST00000342503 LCA5LO95447 670 aa21.83■■□□□ 1.08
RTN1-202ENST00000342503 SERPING1P05155 500 aa21.83■■□□□ 1.08
RTN1-202ENST00000342503 KRT13P13646 458 aa21.83■■□□□ 1.08
RTN1-202ENST00000342503 PWP2Q15269 919 aaKnown RBP21.83■■□□□ 1.08
RTN1-202ENST00000342503 SPA17Q15506 151 aa21.83■■□□□ 1.08
RTN1-202ENST00000342503 SLC9C1Q4G0N8 1177 aa21.83■■□□□ 1.08
RTN1-202ENST00000342503 CELF3Q5SZQ8 465 aaKnown RBP21.83■■□□□ 1.08
RTN1-202ENST00000342503 SPRYD7Q5W111 196 aa21.83■■□□□ 1.08
RTN1-202ENST00000342503 SLC35F6Q8N357 371 aa21.83■■□□□ 1.08
RTN1-202ENST00000342503 DHX33Q9H6R0 707 aaKnown RBP21.83■■□□□ 1.08
RTN1-202ENST00000342503 NRBP2Q9NSY0 501 aa21.83■■□□□ 1.08
RTN1-202ENST00000342503 ZNF215Q9UL58 517 aaPredicted RBP21.83■■□□□ 1.08
RTN1-202ENST00000342503 GUCA1BQ9UMX6 200 aa21.83■■□□□ 1.08
RTN1-202ENST00000342503 SSU72P8A0A1W2PR75 194 aa21.82■■□□□ 1.08
RTN1-202ENST00000342503 RCCD1A6NED2 376 aa21.82■■□□□ 1.08
RTN1-202ENST00000342503 AKR1B10O60218 316 aa21.82■■□□□ 1.08
RTN1-202ENST00000342503 ASIC2Q16515 512 aa21.82■■□□□ 1.08
RTN1-202ENST00000342503 ASTE1Q2TB18 679 aaPredicted RBP21.82■■□□□ 1.08
RTN1-202ENST00000342503 CBWD6Q4V339 395 aa21.82■■□□□ 1.08
RTN1-202ENST00000342503 CBWD3Q5JTY5 395 aa21.82■■□□□ 1.08
RTN1-202ENST00000342503 CBWD5Q5RIA9 395 aa21.82■■□□□ 1.08
RTN1-202ENST00000342503 INTS8Q75QN2 995 aaKnown RBP21.82■■□□□ 1.08
RTN1-202ENST00000342503 TMEM143Q96AN5 459 aa21.82■■□□□ 1.08
RTN1-202ENST00000342503 GPR20Q99678 358 aa21.82■■□□□ 1.08
RTN1-202ENST00000342503 AIPL1Q9NZN9 384 aa21.82■■□□□ 1.08
RTN1-202ENST00000342503 MYO1AQ9UBC5 1043 aa21.82■■□□□ 1.08
RTN1-202ENST00000342503 SIP14410 1827 aa21.81■■□□□ 1.08
RTN1-202ENST00000342503 ASB14A6NK59 587 aa21.81■■□□□ 1.08
RTN1-202ENST00000342503 ADSSP30520 456 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms